RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 C8orf37Q96NL8 207 aa14.24□□□□□ -0.13
LRP1-202ENST00000338962 KDM2BQ8NHM5 1336 aa14.24□□□□□ -0.13
LRP1-202ENST00000338962 SLIT2O94813 1529 aa14.24□□□□□ -0.13
LRP1-202ENST00000338962 CALD1Q05682 793 aaKnown RBP14.24□□□□□ -0.13
LRP1-202ENST00000338962 EXOSC9Q06265 439 aaKnown RBP14.24□□□□□ -0.13
LRP1-202ENST00000338962 HSP90AB2PQ58FF8 381 aa14.24□□□□□ -0.13
LRP1-202ENST00000338962 MEX3CQ5U5Q3 659 aaKnown RBP14.24□□□□□ -0.13
LRP1-202ENST00000338962 PANK1Q8TE04 598 aa14.24□□□□□ -0.13
LRP1-202ENST00000338962 BTG4Q9NY30 223 aa14.23□□□□□ -0.13
LRP1-202ENST00000338962 COG6Q9Y2V7 657 aa14.23□□□□□ -0.13
LRP1-202ENST00000338962 ZBTB7CA1YPR0 619 aa14.22□□□□□ -0.13
LRP1-202ENST00000338962 EIF4A2Q14240 407 aaKnown RBP14.22□□□□□ -0.13
LRP1-202ENST00000338962 CAMTA1Q9Y6Y1 1673 aa14.22□□□□□ -0.13
LRP1-202ENST00000338962 LMOD3Q0VAK6 560 aa14.22□□□□□ -0.13
LRP1-202ENST00000338962 UNC5CLQ8IV45 518 aa14.22□□□□□ -0.13
LRP1-202ENST00000338962 SMC4Q9NTJ3 1288 aa14.22□□□□□ -0.13
LRP1-202ENST00000338962 ERBB3P21860 1342 aa14.22□□□□□ -0.13
LRP1-202ENST00000338962 BCL9LQ86UU0 1499 aa14.21□□□□□ -0.13
LRP1-202ENST00000338962 COL18A1P39060 1754 aa14.21□□□□□ -0.13
LRP1-202ENST00000338962 CLUAP1Q96AJ1 413 aa14.21□□□□□ -0.13
LRP1-202ENST00000338962 LMO7Q8WWI1 1683 aa14.21□□□□□ -0.14
LRP1-202ENST00000338962 COL14A1Q05707 1796 aaKnown RBP14.21□□□□□ -0.14
LRP1-202ENST00000338962 MS4A1P11836 297 aa14.2□□□□□ -0.14
LRP1-202ENST00000338962 COL5A2P05997 1499 aaPredicted RBP14.2□□□□□ -0.14
LRP1-202ENST00000338962 AFF2P51816 1311 aa14.2□□□□□ -0.14
LRP1-202ENST00000338962 ANKRD24Q8TF21 1146 aa14.2□□□□□ -0.14
LRP1-202ENST00000338962 USP21Q9UK80 565 aa14.2□□□□□ -0.14
LRP1-202ENST00000338962 AAMPQ13685 434 aa14.19□□□□□ -0.14
LRP1-202ENST00000338962 ZKSCAN2Q63HK3 967 aa14.19□□□□□ -0.14
LRP1-202ENST00000338962 SULT6B1Q6IMI4 303 aa14.19□□□□□ -0.14
LRP1-202ENST00000338962 LAS1LQ9Y4W2 734 aaKnown RBP14.19□□□□□ -0.14
LRP1-202ENST00000338962 PEAK1Q9H792 1746 aa14.19□□□□□ -0.14
LRP1-202ENST00000338962 WDR17Q8IZU2 1322 aa14.19□□□□□ -0.14
LRP1-202ENST00000338962 EVA1CP58658 441 aa14.19□□□□□ -0.14
LRP1-202ENST00000338962 FTSJ3Q8IY81 847 aaKnown RBP14.19□□□□□ -0.14
LRP1-202ENST00000338962 GNAI1P63096 354 aa14.18□□□□□ -0.14
LRP1-202ENST00000338962 AEBP1Q8IUX7 1158 aa14.18□□□□□ -0.14
LRP1-202ENST00000338962 SSH1Q8WYL5 1049 aa14.18□□□□□ -0.14
LRP1-202ENST00000338962 RLBP1P12271 317 aa14.17□□□□□ -0.14
LRP1-202ENST00000338962 VPS72Q15906 364 aa14.17□□□□□ -0.14
LRP1-202ENST00000338962 THUMPD2Q9BTF0 503 aaKnown RBP14.17□□□□□ -0.14
LRP1-202ENST00000338962 IFT57Q9NWB7 429 aa14.17□□□□□ -0.14
LRP1-202ENST00000338962 ZNF772Q68DY9 489 aaPredicted RBP14.17□□□□□ -0.14
LRP1-202ENST00000338962 LARP1Q6PKG0 1096 aaKnown RBP14.17□□□□□ -0.14
LRP1-202ENST00000338962 STRN4Q9NRL3 753 aa14.17□□□□□ -0.14
LRP1-202ENST00000338962 LTN1O94822 1766 aa14.17□□□□□ -0.14
LRP1-202ENST00000338962 KIF16BQ96L93 1317 aa14.16□□□□□ -0.14
LRP1-202ENST00000338962 DZIP1LQ8IYY4 767 aaKnown RBP14.16□□□□□ -0.14
LRP1-202ENST00000338962 ZNF428Q96B54 188 aa14.16□□□□□ -0.14
LRP1-202ENST00000338962 RGS17Q9UGC6 210 aaPredicted RBP14.16□□□□□ -0.14
LRP1-202ENST00000338962 TNNQ9UQP3 1299 aa14.16□□□□□ -0.14
LRP1-202ENST00000338962 LTV1Q96GA3 475 aaPredicted RBP14.16□□□□□ -0.14
LRP1-202ENST00000338962 CARD10Q9BWT7 1032 aa14.16□□□□□ -0.14
LRP1-202ENST00000338962 TRPC5Q9UL62 973 aaPredicted RBP14.16□□□□□ -0.14
LRP1-202ENST00000338962 ALDH1L2Q3SY69 923 aa14.15□□□□□ -0.14
LRP1-202ENST00000338962 NBPF6Q5VWK0 638 aa14.15□□□□□ -0.14
LRP1-202ENST00000338962 SKAP1Q86WV1 359 aa14.15□□□□□ -0.14
LRP1-202ENST00000338962 NBPF4Q96M43 638 aa14.15□□□□□ -0.14
LRP1-202ENST00000338962 EYA1Q99502 592 aa14.15□□□□□ -0.14
LRP1-202ENST00000338962 NWD2Q9ULI1 1742 aa14.15□□□□□ -0.14
LRP1-202ENST00000338962 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
LRP1-202ENST00000338962 CRB1P82279 1406 aa14.15□□□□□ -0.14
LRP1-202ENST00000338962 CSB-PGBD3P0DP91 1061 aa14.15□□□□□ -0.15
LRP1-202ENST00000338962 MVPQ14764 893 aaKnown RBP14.15□□□□□ -0.15
LRP1-202ENST00000338962 ATF7IPQ6VMQ6 1270 aa14.15□□□□□ -0.15
LRP1-202ENST00000338962 CFAP44Q96MT7 982 aa14.15□□□□□ -0.15
LRP1-202ENST00000338962 DLG5Q8TDM6 1919 aa14.14□□□□□ -0.15
LRP1-202ENST00000338962 SPATA31A5Q5VU36 1347 aa14.14□□□□□ -0.15
LRP1-202ENST00000338962 SPATA31A7Q8IWB4 1347 aa14.14□□□□□ -0.15
LRP1-202ENST00000338962 ATRNO75882 1429 aa14.14□□□□□ -0.15
LRP1-202ENST00000338962 IPO8O15397 1037 aaKnown RBP14.14□□□□□ -0.15
LRP1-202ENST00000338962 TRIM27P14373 513 aa14.14□□□□□ -0.15
LRP1-202ENST00000338962 PDE4AP27815 886 aa14.14□□□□□ -0.15
LRP1-202ENST00000338962 TOM1L2Q6ZVM7 507 aa14.14□□□□□ -0.15
LRP1-202ENST00000338962 QTRT2Q9H974 415 aaKnown RBP14.14□□□□□ -0.15
LRP1-202ENST00000338962 SPATA31A1Q5TZJ5 1347 aa14.14□□□□□ -0.15
LRP1-202ENST00000338962 IGSF1Q8N6C5 1336 aa14.14□□□□□ -0.15
LRP1-202ENST00000338962 ZNF853P0CG23 659 aa14.13□□□□□ -0.15
LRP1-202ENST00000338962 MBIPQ9NS73 344 aa14.13□□□□□ -0.15
LRP1-202ENST00000338962 THRAP3Q9Y2W1 955 aaKnown RBP14.13□□□□□ -0.15
LRP1-202ENST00000338962 PLCH1Q4KWH8 1693 aa14.13□□□□□ -0.15
LRP1-202ENST00000338962 NCAPD2Q15021 1401 aa14.13□□□□□ -0.15
LRP1-202ENST00000338962 GJD4Q96KN9 370 aaPredicted RBP14.13□□□□□ -0.15
LRP1-202ENST00000338962 NLRP2Q9NX02 1062 aa14.13□□□□□ -0.15
LRP1-202ENST00000338962 NOB1Q9ULX3 412 aaKnown RBP14.13□□□□□ -0.15
LRP1-202ENST00000338962 IGHDP01880 384 aa14.12□□□□□ -0.15
LRP1-202ENST00000338962 ANP32AP39687 249 aaKnown RBP14.12□□□□□ -0.15
LRP1-202ENST00000338962 BACH2Q9BYV9 841 aa14.12□□□□□ -0.15
LRP1-202ENST00000338962 NRAPQ86VF7 1730 aa14.12□□□□□ -0.15
LRP1-202ENST00000338962 DCTN1Q14203 1278 aa14.12□□□□□ -0.15
LRP1-202ENST00000338962 KDRP35968 1356 aa14.11□□□□□ -0.15
LRP1-202ENST00000338962 BARGINQ6ZT62 677 aa14.11□□□□□ -0.15
LRP1-202ENST00000338962 DDX19BQ9UMR2 479 aa14.11□□□□□ -0.15
LRP1-202ENST00000338962 ONECUT3O60422 494 aaPredicted RBP14.1□□□□□ -0.15
LRP1-202ENST00000338962 ITPRIPQ8IWB1 547 aa14.1□□□□□ -0.15
LRP1-202ENST00000338962 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.1□□□□□ -0.15
LRP1-202ENST00000338962 VAMP4O75379 141 aa14.1□□□□□ -0.15
LRP1-202ENST00000338962 RGS3P49796 1198 aa14.1□□□□□ -0.15
LRP1-202ENST00000338962 BRPF1P55201 1214 aaPredicted RBP14.09□□□□□ -0.15
LRP1-202ENST00000338962 TWISTNBQ3B726 338 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms