RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 KIF16BQ96L93 1317 aa7.08□□□□□ -1.28
PRPF4B-201ENST00000337659 SBF2Q86WG5 1849 aa7.07□□□□□ -1.28
PRPF4B-201ENST00000337659 FANCIQ9NVI1 1328 aa7.07□□□□□ -1.28
PRPF4B-201ENST00000337659 SCN7AQ01118 1682 aa7.07□□□□□ -1.28
PRPF4B-201ENST00000337659 BCL9LQ86UU0 1499 aa7.07□□□□□ -1.28
PRPF4B-201ENST00000337659 CHL1O00533 1208 aa7.07□□□□□ -1.28
PRPF4B-201ENST00000337659 RARSP54136 660 aaKnown RBP7.07□□□□□ -1.28
PRPF4B-201ENST00000337659 GGNBP2Q9H3C7 697 aa7.07□□□□□ -1.28
PRPF4B-201ENST00000337659 DOT1LQ8TEK3 1739 aa7.07□□□□□ -1.28
PRPF4B-201ENST00000337659 SLC26A8Q96RN1 970 aa7.07□□□□□ -1.28
PRPF4B-201ENST00000337659 SLIT2O94813 1529 aa7.06□□□□□ -1.28
PRPF4B-201ENST00000337659 HOXB7P09629 217 aa7.06□□□□□ -1.28
PRPF4B-201ENST00000337659 CALD1Q05682 793 aaKnown RBP7.06□□□□□ -1.28
PRPF4B-201ENST00000337659 LMOD3Q0VAK6 560 aa7.06□□□□□ -1.28
PRPF4B-201ENST00000337659 KIAA1551Q9HCM1 1747 aa7.06□□□□□ -1.28
PRPF4B-201ENST00000337659 CFAP44Q96MT7 982 aa7.05□□□□□ -1.28
PRPF4B-201ENST00000337659 MAP3K5Q99683 1374 aa7.05□□□□□ -1.28
PRPF4B-201ENST00000337659 MEGF6O75095 1541 aa7.05□□□□□ -1.28
PRPF4B-201ENST00000337659 KDM6AO15550 1401 aaPredicted RBP7.05□□□□□ -1.28
PRPF4B-201ENST00000337659 APAF1O14727 1248 aa7.05□□□□□ -1.28
PRPF4B-201ENST00000337659 CDCA7LQ96GN5 454 aa7.05□□□□□ -1.28
PRPF4B-201ENST00000337659 MYH16Q9H6N6 1097 aa7.05□□□□□ -1.28
PRPF4B-201ENST00000337659 ZNF772Q68DY9 489 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-201ENST00000337659 EMILIN1Q9Y6C2 1016 aa7.04□□□□□ -1.28
PRPF4B-201ENST00000337659 TAF1LQ8IZX4 1826 aa7.04□□□□□ -1.28
PRPF4B-201ENST00000337659 MS4A1P11836 297 aa7.04□□□□□ -1.28
PRPF4B-201ENST00000337659 SPEF2Q9C093 1822 aa7.03□□□□□ -1.28
PRPF4B-201ENST00000337659 CADPS2Q86UW7 1296 aa7.03□□□□□ -1.28
PRPF4B-201ENST00000337659 AFDNP55196 1824 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-201ENST00000337659 NKX1-1Q15270 411 aaPredicted RBP7.03□□□□□ -1.28
PRPF4B-201ENST00000337659 CCDC125Q86Z20 511 aa7.03□□□□□ -1.28
PRPF4B-201ENST00000337659 ZRANB1Q9UGI0 708 aa7.03□□□□□ -1.28
PRPF4B-201ENST00000337659 NPHP3Q7Z494 1330 aa7.03□□□□□ -1.28
PRPF4B-201ENST00000337659 POTEAQ6S8J7 498 aa7.03□□□□□ -1.28
PRPF4B-201ENST00000337659 ERBB3P21860 1342 aa7.02□□□□□ -1.29
PRPF4B-201ENST00000337659 HDAC1Q13547 482 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-201ENST00000337659 PHACTR3Q96KR7 559 aa7.02□□□□□ -1.29
PRPF4B-201ENST00000337659 YTHDC1Q96MU7 727 aaKnown RBP7.02□□□□□ -1.29
PRPF4B-201ENST00000337659 VAMP4O75379 141 aa7.01□□□□□ -1.29
PRPF4B-201ENST00000337659 MRPL50Q8N5N7 158 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-201ENST00000337659 UPF1Q92900 1129 aaKnown RBP eCLIP7.01□□□□□ -1.29
PRPF4B-201ENST00000337659 GNAI1P63096 354 aa7.01□□□□□ -1.29
PRPF4B-201ENST00000337659 BRINP3Q76B58 766 aa7.01□□□□□ -1.29
PRPF4B-201ENST00000337659 EYA1Q99502 592 aa7□□□□□ -1.29
PRPF4B-201ENST00000337659 PTPRCP08575 1304 aa7□□□□□ -1.29
PRPF4B-201ENST00000337659 IL17RAQ96F46 866 aa7□□□□□ -1.29
PRPF4B-201ENST00000337659 PSME1Q06323 249 aa7□□□□□ -1.29
PRPF4B-201ENST00000337659 NRXN2Q9P2S2 1712 aa7□□□□□ -1.29
PRPF4B-201ENST00000337659 INTS3Q68E01 1043 aaKnown RBP7□□□□□ -1.29
PRPF4B-201ENST00000337659 FNBP4Q8N3X1 1017 aaPredicted RBP6.99□□□□□ -1.29
PRPF4B-201ENST00000337659 GAS2L2Q8NHY3 880 aa6.99□□□□□ -1.29
PRPF4B-201ENST00000337659 UTYO14607 1347 aa6.99□□□□□ -1.29
PRPF4B-201ENST00000337659 ZBTB22O15209 634 aa6.99□□□□□ -1.29
PRPF4B-201ENST00000337659 PRKAR2BP31323 418 aa6.99□□□□□ -1.29
PRPF4B-201ENST00000337659 LRRC37AA6NMS7 1700 aa6.99□□□□□ -1.29
PRPF4B-201ENST00000337659 CENPQQ7L2Z9 268 aaPredicted RBP6.98□□□□□ -1.29
PRPF4B-201ENST00000337659 KCNA4P22459 653 aa6.98□□□□□ -1.29
PRPF4B-201ENST00000337659 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.98□□□□□ -1.29
PRPF4B-201ENST00000337659 SLAIN2Q9P270 581 aa6.98□□□□□ -1.29
PRPF4B-201ENST00000337659 MYH3P11055 1940 aa6.98□□□□□ -1.29
PRPF4B-201ENST00000337659 FKBP8Q14318 412 aa6.98□□□□□ -1.29
PRPF4B-201ENST00000337659 AMOTQ4VCS5 1084 aa6.98□□□□□ -1.29
PRPF4B-201ENST00000337659 LRP10Q7Z4F1 713 aa6.98□□□□□ -1.29
PRPF4B-201ENST00000337659 RGL2O15211 777 aa6.98□□□□□ -1.29
PRPF4B-201ENST00000337659 C4AP0C0L4 1744 aa6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 C4BP0C0L5 1744 aa6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 DOCK2Q92608 1830 aa6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 ONECUT3O60422 494 aaPredicted RBP6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 GCP02774 474 aa6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 HAP1P54257 671 aaPredicted RBP6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 HSP90AB2PQ58FF8 381 aa6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 MBIPQ9NS73 344 aa6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 AKAP4Q5JQC9 854 aa6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 ZBTB40Q9NUA8 1239 aa6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 EIF5BO60841 1220 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 SAFB2Q14151 953 aaKnown RBP eCLIP6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 MVPQ14764 893 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-201ENST00000337659 ZNF646O15015 1829 aaPredicted RBP6.96□□□□□ -1.29
PRPF4B-201ENST00000337659 U2AF1L5P0DN76 240 aaPredicted RBP6.96□□□□□ -1.29
PRPF4B-201ENST00000337659 U2AF1Q01081 240 aaKnown RBP eCLIP6.96□□□□□ -1.29
PRPF4B-201ENST00000337659 CCDC146Q8IYE0 955 aa6.96□□□□□ -1.29
PRPF4B-201ENST00000337659 RIPK4P57078 832 aa6.96□□□□□ -1.3
PRPF4B-201ENST00000337659 MTHFSDQ2M296 383 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-201ENST00000337659 KRT28Q7Z3Y7 464 aa6.96□□□□□ -1.3
PRPF4B-201ENST00000337659 SMC5Q8IY18 1101 aa6.96□□□□□ -1.3
PRPF4B-201ENST00000337659 TSHZ2Q9NRE2 1034 aa6.96□□□□□ -1.3
PRPF4B-201ENST00000337659 ERBB4Q15303 1308 aa6.96□□□□□ -1.3
PRPF4B-201ENST00000337659 WDR17Q8IZU2 1322 aa6.96□□□□□ -1.3
PRPF4B-201ENST00000337659 RRS1Q15050 365 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-201ENST00000337659 ORAI2Q96SN7 254 aa6.96□□□□□ -1.3
PRPF4B-201ENST00000337659 MAPK8IP3Q9UPT6 1336 aa6.95□□□□□ -1.3
PRPF4B-201ENST00000337659 SALL3Q9BXA9 1300 aa6.95□□□□□ -1.3
PRPF4B-201ENST00000337659 TCERG1O14776 1098 aaKnown RBP6.95□□□□□ -1.3
PRPF4B-201ENST00000337659 ATF7IPQ6VMQ6 1270 aa6.95□□□□□ -1.3
PRPF4B-201ENST00000337659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.95□□□□□ -1.3
PRPF4B-201ENST00000337659 NUP98P52948 1817 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 C20orf194Q5TEA3 1177 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 BTAF1O14981 1849 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 ZBTB7BO15156 539 aaPredicted RBP6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 PROSER2Q86WR7 435 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms