RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 PDCL3Q9H2J4 239 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 CCDC148Q8NFR7 591 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 HMGB2P26583 209 aaKnown RBP9.44□□□□□ -0.9
TNPO1-201ENST00000337273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.44□□□□□ -0.92e-7■■■■■ 165.3
TNPO1-201ENST00000337273 ZNF397Q8NF99 534 aaPredicted RBP9.44□□□□□ -0.9
TNPO1-201ENST00000337273 SYCE3A1L190 88 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
TNPO1-201ENST00000337273 TMCO3Q6UWJ1 677 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 BRPF1P55201 1214 aaPredicted RBP9.43□□□□□ -0.9
TNPO1-201ENST00000337273 SPATA32Q96LK8 384 aa9.43□□□□□ -0.9
TNPO1-201ENST00000337273 EZRP15311 586 aaKnown RBP9.43□□□□□ -0.9
TNPO1-201ENST00000337273 DESP17661 470 aa9.43□□□□□ -0.9
TNPO1-201ENST00000337273 TSHZ3Q63HK5 1081 aa9.43□□□□□ -0.9
TNPO1-201ENST00000337273 UBXN4Q92575 508 aa9.43□□□□□ -0.9
TNPO1-201ENST00000337273 CTAGE5O15320 804 aa9.43□□□□□ -0.9
TNPO1-201ENST00000337273 PLEKHO1Q53GL0 409 aaPredicted RBP9.43□□□□□ -0.9
TNPO1-201ENST00000337273 TICAM2Q86XR7 235 aa9.43□□□□□ -0.9
TNPO1-201ENST00000337273 PIBF1Q8WXW3 757 aa9.43□□□□□ -0.9
TNPO1-201ENST00000337273 GNL3LQ9NVN8 582 aaKnown RBP9.43□□□□□ -0.9
TNPO1-201ENST00000337273 CALCOCO1Q9P1Z2 691 aa9.43□□□□□ -0.9
TNPO1-201ENST00000337273 KIAA1107Q9UPP5 1409 aa9.43□□□□□ -0.9
TNPO1-201ENST00000337273 SHTN1A0MZ66 631 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 CAVIN2O95810 425 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 ME1P48163 572 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 POTEB2H3BUK9 544 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 FILIP1Q7Z7B0 1213 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 UPF3BQ9BZI7 483 aaKnown RBP9.42□□□□□ -0.9
TNPO1-201ENST00000337273 SSFA2P28290 1259 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 LIG1P18858 919 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 IMMTQ16891 758 aaKnown RBP9.42□□□□□ -0.9
TNPO1-201ENST00000337273 GOLGA6L9A6NEM1 432 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 MICALCLQ6ZW33 695 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 MAP3K11Q16584 847 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 JAKMIP3Q5VZ66 844 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 BLOC1S2Q6QNY1 142 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 NEFHP12036 1026 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 KIF6Q6ZMV9 814 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 DDX11Q96FC9 970 aa9.42□□□□□ -0.9
TNPO1-201ENST00000337273 GDPD2Q9HCC8 539 aa9.41□□□□□ -0.9
TNPO1-201ENST00000337273 BMP2KQ9NSY1 1161 aaPredicted RBP9.41□□□□□ -0.9
TNPO1-201ENST00000337273 GBP2P32456 591 aaPredicted RBP9.41□□□□□ -0.9
TNPO1-201ENST00000337273 EXOSC9Q06265 439 aaKnown RBP9.41□□□□□ -0.9
TNPO1-201ENST00000337273 SCAND2PQ9GZW5 306 aaPredicted RBP9.41□□□□□ -0.9
TNPO1-201ENST00000337273 IGF1RP08069 1367 aa9.41□□□□□ -0.9
TNPO1-201ENST00000337273 DAPK1P53355 1430 aa9.41□□□□□ -0.9
TNPO1-201ENST00000337273 CCDC83Q8IWF9 413 aa9.41□□□□□ -0.9
TNPO1-201ENST00000337273 KIF18AQ8NI77 898 aa9.41□□□□□ -0.9
TNPO1-201ENST00000337273 DNA2P51530 1060 aa9.41□□□□□ -0.9
TNPO1-201ENST00000337273 CCDC69A6NI79 296 aa9.41□□□□□ -0.9
TNPO1-201ENST00000337273 NOB1Q9ULX3 412 aaKnown RBP9.41□□□□□ -0.9
TNPO1-201ENST00000337273 HMGB1P09429 215 aaKnown RBP9.41□□□□□ -0.9
TNPO1-201ENST00000337273 GTF2F1P35269 517 aaKnown RBP eCLIP9.41□□□□□ -0.93e-6■■■■□ 22.6
TNPO1-201ENST00000337273 RAB11FIP4Q86YS3 637 aa9.41□□□□□ -0.9
TNPO1-201ENST00000337273 CRACR2AQ9BSW2 395 aa9.41□□□□□ -0.9
TNPO1-201ENST00000337273 AK9Q5TCS8 1911 aa9.4□□□□□ -0.9
TNPO1-201ENST00000337273 EPB41L2O43491 1005 aaKnown RBP9.4□□□□□ -0.9
TNPO1-201ENST00000337273 RAB11FIP3O75154 756 aa9.4□□□□□ -0.9
TNPO1-201ENST00000337273 GPRASP1Q5JY77 1395 aa9.4□□□□□ -0.9
TNPO1-201ENST00000337273 GOLGA6L10A0A0M3HER8 536 aa9.4□□□□□ -0.9
TNPO1-201ENST00000337273 ANO10Q9NW15 660 aa9.4□□□□□ -0.9
TNPO1-201ENST00000337273 KRT18P05783 430 aaKnown RBP9.4□□□□□ -0.9
TNPO1-201ENST00000337273 PTPN14Q15678 1187 aa9.4□□□□□ -0.9
TNPO1-201ENST00000337273 PRDM2Q13029 1718 aa9.4□□□□□ -0.91
TNPO1-201ENST00000337273 FGD5Q6ZNL6 1462 aa9.4□□□□□ -0.91
TNPO1-201ENST00000337273 GSDMDP57764 484 aa9.4□□□□□ -0.91
TNPO1-201ENST00000337273 RABEP2Q9H5N1 569 aa9.4□□□□□ -0.91
TNPO1-201ENST00000337273 TRMT1Q9NXH9 659 aaKnown RBP9.4□□□□□ -0.91
TNPO1-201ENST00000337273 ATP2C2O75185 946 aa9.4□□□□□ -0.91
TNPO1-201ENST00000337273 TTC39AQ5SRH9 613 aa9.4□□□□□ -0.91
TNPO1-201ENST00000337273 SLC26A8Q96RN1 970 aa9.4□□□□□ -0.91
TNPO1-201ENST00000337273 ARHGAP29Q52LW3 1261 aa9.39□□□□□ -0.91
TNPO1-201ENST00000337273 CCDC183Q5T5S1 534 aa9.39□□□□□ -0.91
TNPO1-201ENST00000337273 ALDH1L2Q3SY69 923 aa9.39□□□□□ -0.91
TNPO1-201ENST00000337273 ENOX2Q16206 610 aaKnown RBP9.39□□□□□ -0.91
TNPO1-201ENST00000337273 PDRG1Q9NUG6 133 aa9.39□□□□□ -0.91
TNPO1-201ENST00000337273 CETN2P41208 172 aa9.39□□□□□ -0.91
TNPO1-201ENST00000337273 TUBB4AP04350 444 aa9.39□□□□□ -0.91
TNPO1-201ENST00000337273 FCHSD2O94868 740 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 SH2B1Q9NRF2 756 aaPredicted RBP9.38□□□□□ -0.91
TNPO1-201ENST00000337273 RNF216Q9NWF9 866 aaPredicted RBP9.38□□□□□ -0.91
TNPO1-201ENST00000337273 ATAD2Q6PL18 1390 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 SYNJ2O15056 1496 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 PRKAR2BP31323 418 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 RPGRIP1LQ68CZ1 1315 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 PRIMPOLQ96LW4 560 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 SUPT6HQ7KZ85 1726 aaKnown RBP9.38□□□□□ -0.91
TNPO1-201ENST00000337273 UVSSAQ2YD98 709 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 SFPQP23246 707 aaKnown RBP eCLIP9.38□□□□□ -0.91
TNPO1-201ENST00000337273 TUBB4BP68371 445 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 CCDC102AQ96A19 550 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 KIF5CO60282 957 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 PYM1Q9BRP8 204 aaKnown RBP9.38□□□□□ -0.91
TNPO1-201ENST00000337273 ABCC11Q96J66 1382 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 PPP1R12BO60237 982 aaPredicted RBP9.38□□□□□ -0.91
TNPO1-201ENST00000337273 KIF20AO95235 890 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 SOGA3Q5TF21 947 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 GIMAP7Q8NHV1 300 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 PAXBP1Q9Y5B6 917 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms