RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ABCC4O15439 1325 aa20.3■□□□□ 0.84
CDC42EP4-201ENST00000335793 KIF2CQ99661 725 aa20.3■□□□□ 0.84
CDC42EP4-201ENST00000335793 VGLL3A8MV65 326 aa20.3■□□□□ 0.84
CDC42EP4-201ENST00000335793 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
CDC42EP4-201ENST00000335793 CFAP74Q9C0B2 1584 aa20.3■□□□□ 0.84
CDC42EP4-201ENST00000335793 NOL8Q76FK4 1167 aaKnown RBP20.29■□□□□ 0.84
CDC42EP4-201ENST00000335793 MEIS3Q99687 375 aa20.29■□□□□ 0.84
CDC42EP4-201ENST00000335793 F6X3S4 739 aa20.29■□□□□ 0.84
CDC42EP4-201ENST00000335793 ZNF853P0CG23 659 aa20.29■□□□□ 0.84
CDC42EP4-201ENST00000335793 HSP90AB2PQ58FF8 381 aa20.29■□□□□ 0.84
CDC42EP4-201ENST00000335793 PAXIP1Q6ZW49 1069 aaPredicted RBP20.29■□□□□ 0.84
CDC42EP4-201ENST00000335793 TPM2P07951 284 aa20.29■□□□□ 0.84
CDC42EP4-201ENST00000335793 DCTPP1Q9H773 170 aa20.29■□□□□ 0.84
CDC42EP4-201ENST00000335793 HDGFP51858 240 aaKnown RBP20.28■□□□□ 0.84
CDC42EP4-201ENST00000335793 EIF4A2Q14240 407 aaKnown RBP20.28■□□□□ 0.84
CDC42EP4-201ENST00000335793 RABEP1Q15276 862 aa20.28■□□□□ 0.84
CDC42EP4-201ENST00000335793 TTC22Q5TAA0 569 aa20.28■□□□□ 0.84
CDC42EP4-201ENST00000335793 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.84
CDC42EP4-201ENST00000335793 GAS2L3Q86XJ1 694 aa20.27■□□□□ 0.84
CDC42EP4-201ENST00000335793 TSPYL4Q9UJ04 414 aa20.27■□□□□ 0.84
CDC42EP4-201ENST00000335793 ST18O60284 1047 aa20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 ARHGEF40Q8TER5 1519 aa20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 HMMRO75330 724 aa20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 SDSP20132 328 aa20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 RPAP2Q8IXW5 612 aaPredicted RBP20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 R3HCC1Q9Y3T6 440 aaKnown RBP20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 DIP2CQ9Y2E4 1556 aa20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 PTMSP20962 102 aa20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 TPRNQ4KMQ1 711 aa20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 MED14O60244 1454 aa20.26■□□□□ 0.83
CDC42EP4-201ENST00000335793 ANKRD44Q8N8A2 993 aa20.25■□□□□ 0.83
CDC42EP4-201ENST00000335793 ALKQ9UM73 1620 aa20.25■□□□□ 0.83
CDC42EP4-201ENST00000335793 TRIM6-TRIM34B2RNG4 842 aa20.24■□□□□ 0.83
CDC42EP4-201ENST00000335793 TSHZ3Q63HK5 1081 aa20.24■□□□□ 0.83
CDC42EP4-201ENST00000335793 FOXO3O43524 673 aa20.24■□□□□ 0.83
CDC42EP4-201ENST00000335793 BAG4O95429 457 aaKnown RBP20.24■□□□□ 0.83
CDC42EP4-201ENST00000335793 GTF2E1P29083 439 aaPredicted RBP20.24■□□□□ 0.83
CDC42EP4-201ENST00000335793 CAVIN1Q6NZI2 390 aaKnown RBP20.24■□□□□ 0.83
CDC42EP4-201ENST00000335793 CEP85Q6P2H3 762 aa20.24■□□□□ 0.83
CDC42EP4-201ENST00000335793 EXOC6BQ9Y2D4 811 aa20.24■□□□□ 0.83
CDC42EP4-201ENST00000335793 EDC4Q6P2E9 1401 aaKnown RBP20.23■□□□□ 0.83
CDC42EP4-201ENST00000335793 AMPHP49418 695 aa20.23■□□□□ 0.83
CDC42EP4-201ENST00000335793 C14orf37Q86TY3 774 aa20.23■□□□□ 0.83
CDC42EP4-201ENST00000335793 RILPL2Q969X0 211 aa20.23■□□□□ 0.83
CDC42EP4-201ENST00000335793 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
CDC42EP4-201ENST00000335793 METP08581 1390 aa20.23■□□□□ 0.83
CDC42EP4-201ENST00000335793 REC8O95072 547 aa20.22■□□□□ 0.83
CDC42EP4-201ENST00000335793 FOXD4L6Q3SYB3 417 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP4-201ENST00000335793 FOXD4L3Q6VB84 417 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP4-201ENST00000335793 LTV1Q96GA3 475 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP4-201ENST00000335793 PTCH1Q13635 1447 aa20.22■□□□□ 0.83
CDC42EP4-201ENST00000335793 NASPP49321 788 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP4-201ENST00000335793 NGDNQ8NEJ9 315 aaKnown RBP20.22■□□□□ 0.83
CDC42EP4-201ENST00000335793 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
CDC42EP4-201ENST00000335793 NUCB2P80303 420 aa20.21■□□□□ 0.83
CDC42EP4-201ENST00000335793 USP26Q9BXU7 913 aa20.21■□□□□ 0.83
CDC42EP4-201ENST00000335793 MYO5BQ9ULV0 1848 aa20.21■□□□□ 0.83
CDC42EP4-201ENST00000335793 FKBP5Q13451 457 aaPredicted RBP20.21■□□□□ 0.83
CDC42EP4-201ENST00000335793 ACEP12821 1306 aa20.21■□□□□ 0.83
CDC42EP4-201ENST00000335793 PRPF40AO75400 957 aaKnown RBP20.21■□□□□ 0.83
CDC42EP4-201ENST00000335793 DDIT3P35638 169 aa20.2■□□□□ 0.82
CDC42EP4-201ENST00000335793 NUTM2GQ5VZR2 741 aa20.2■□□□□ 0.82
CDC42EP4-201ENST00000335793 NEK4P51957 841 aa20.2■□□□□ 0.82
CDC42EP4-201ENST00000335793 G2E3Q7L622 706 aa20.2■□□□□ 0.82
CDC42EP4-201ENST00000335793 PKP1Q13835 747 aa20.19■□□□□ 0.82
CDC42EP4-201ENST00000335793 ZGPATQ8N5A5 531 aaKnown RBP20.19■□□□□ 0.82
CDC42EP4-201ENST00000335793 ISY1Q9ULR0 285 aaKnown RBP20.19■□□□□ 0.82
CDC42EP4-201ENST00000335793 MSH6P52701 1360 aa20.19■□□□□ 0.82
CDC42EP4-201ENST00000335793 CHL1O00533 1208 aa20.19■□□□□ 0.82
CDC42EP4-201ENST00000335793 TTC21BQ7Z4L5 1316 aa20.18■□□□□ 0.82
CDC42EP4-201ENST00000335793 ATP7BP35670 1465 aa20.18■□□□□ 0.82
CDC42EP4-201ENST00000335793 ERC2O15083 957 aa20.17■□□□□ 0.82
CDC42EP4-201ENST00000335793 ANO2Q9NQ90 1003 aa20.17■□□□□ 0.82
CDC42EP4-201ENST00000335793 TMEM131LA2VDJ0 1609 aa20.17■□□□□ 0.82
CDC42EP4-201ENST00000335793 MAP2P11137 1827 aaKnown RBP20.17■□□□□ 0.82
CDC42EP4-201ENST00000335793 PRR36Q9H6K5 1346 aa20.16■□□□□ 0.82
CDC42EP4-201ENST00000335793 PIK3R4Q99570 1358 aa20.16■□□□□ 0.82
CDC42EP4-201ENST00000335793 KIF13AQ9H1H9 1805 aa20.16■□□□□ 0.82
CDC42EP4-201ENST00000335793 CHAMP1Q96JM3 812 aa20.15■□□□□ 0.82
CDC42EP4-201ENST00000335793 GNAI2P04899 355 aa20.15■□□□□ 0.82
CDC42EP4-201ENST00000335793 PTPRCP08575 1304 aa20.14■□□□□ 0.82
CDC42EP4-201ENST00000335793 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.82
CDC42EP4-201ENST00000335793 KLHL40Q2TBA0 621 aa20.14■□□□□ 0.82
CDC42EP4-201ENST00000335793 NCOA3Q9Y6Q9 1424 aa20.14■□□□□ 0.81
CDC42EP4-201ENST00000335793 MSNP26038 577 aaKnown RBP20.14■□□□□ 0.81
CDC42EP4-201ENST00000335793 AATKQ6ZMQ8 1374 aa20.14■□□□□ 0.81
CDC42EP4-201ENST00000335793 MCCP23508 829 aa20.13■□□□□ 0.81
CDC42EP4-201ENST00000335793 RTL1A6NKG5 1358 aa20.13■□□□□ 0.81
CDC42EP4-201ENST00000335793 CEBPAP49715 358 aaPredicted RBP20.13■□□□□ 0.81
CDC42EP4-201ENST00000335793 PREX1Q8TCU6 1659 aa20.12■□□□□ 0.81
CDC42EP4-201ENST00000335793 A2ML1A8K2U0 1454 aa20.12■□□□□ 0.81
CDC42EP4-201ENST00000335793 PDE1AP54750 535 aa20.12■□□□□ 0.81
CDC42EP4-201ENST00000335793 CCT4P50991 539 aaKnown RBP20.12■□□□□ 0.81
CDC42EP4-201ENST00000335793 CPSF1Q10570 1443 aaKnown RBP20.12■□□□□ 0.81
CDC42EP4-201ENST00000335793 CDK12Q9NYV4 1490 aaPredicted RBP20.12■□□□□ 0.81
CDC42EP4-201ENST00000335793 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
CDC42EP4-201ENST00000335793 NLRP6P59044 892 aa20.11■□□□□ 0.81
CDC42EP4-201ENST00000335793 IL1RAPL2Q9NP60 686 aa20.11■□□□□ 0.81
CDC42EP4-201ENST00000335793 LRRCC1Q9C099 1032 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms