RNA–Protein interactions for RNA: ENST00000335440.10

PDE9A-203, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-203ENST00000335440 OVOS2A0A0G2JMS6 1433 aa23.2■■□□□ 1.3
PDE9A-203ENST00000335440 LRRC37A3O60309 1634 aa23.2■■□□□ 1.3
PDE9A-203ENST00000335440 TATP17735 454 aaPredicted RBP23.19■■□□□ 1.3
PDE9A-203ENST00000335440 ONECUT3O60422 494 aaPredicted RBP23.19■■□□□ 1.3
PDE9A-203ENST00000335440 RXRBP28702 533 aa23.19■■□□□ 1.3
PDE9A-203ENST00000335440 PRKAR2BP31323 418 aa23.19■■□□□ 1.3
PDE9A-203ENST00000335440 POTEAQ6S8J7 498 aa23.19■■□□□ 1.3
PDE9A-203ENST00000335440 SHANK3Q9BYB0 1731 aa23.18■■□□□ 1.3
PDE9A-203ENST00000335440 NEFMP07197 916 aa23.16■■□□□ 1.3
PDE9A-203ENST00000335440 PLEKHF1Q96S99 279 aa23.16■■□□□ 1.3
PDE9A-203ENST00000335440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.16■■□□□ 1.3
PDE9A-203ENST00000335440 TNS2Q63HR2 1409 aa23.15■■□□□ 1.3
PDE9A-203ENST00000335440 BRWD3Q6RI45 1802 aa23.15■■□□□ 1.3
PDE9A-203ENST00000335440 AMOTQ4VCS5 1084 aa23.14■■□□□ 1.3
PDE9A-203ENST00000335440 DLG5Q8TDM6 1919 aa23.14■■□□□ 1.3
PDE9A-203ENST00000335440 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
PDE9A-203ENST00000335440 A0A0G2JS52 829 aa23.13■■□□□ 1.29
PDE9A-203ENST00000335440 MYT1Q01538 1121 aa23.13■■□□□ 1.29
PDE9A-203ENST00000335440 DDB1Q16531 1140 aa23.13■■□□□ 1.29
PDE9A-203ENST00000335440 PLEKHO1Q53GL0 409 aaPredicted RBP23.13■■□□□ 1.29
PDE9A-203ENST00000335440 VIRMAQ69YN4 1812 aaKnown RBP23.12■■□□□ 1.29
PDE9A-203ENST00000335440 RUNDC1Q96C34 613 aa23.12■■□□□ 1.29
PDE9A-203ENST00000335440 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
PDE9A-203ENST00000335440 KAT6BQ8WYB5 2073 aa23.12■■□□□ 1.29
PDE9A-203ENST00000335440 EXOC5O00471 708 aa23.11■■□□□ 1.29
PDE9A-203ENST00000335440 ZCRB1Q8TBF4 217 aaKnown RBP23.11■■□□□ 1.29
PDE9A-203ENST00000335440 CCDC146Q8IYE0 955 aa23.11■■□□□ 1.29
PDE9A-203ENST00000335440 SEPT12Q8IYM1 358 aa23.11■■□□□ 1.29
PDE9A-203ENST00000335440 PHACTR3Q96KR7 559 aa23.11■■□□□ 1.29
PDE9A-203ENST00000335440 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
PDE9A-203ENST00000335440 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
PDE9A-203ENST00000335440 GAS2L2Q8NHY3 880 aa23.09■■□□□ 1.29
PDE9A-203ENST00000335440 RGS12O14924 1447 aa23.09■■□□□ 1.29
PDE9A-203ENST00000335440 MTHFSDQ2M296 383 aaKnown RBP23.08■■□□□ 1.28
PDE9A-203ENST00000335440 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
PDE9A-203ENST00000335440 ZNF530Q6P9A1 599 aaPredicted RBP23.06■■□□□ 1.28
PDE9A-203ENST00000335440 EP400Q96L91 3159 aa23.06■■□□□ 1.28
PDE9A-203ENST00000335440 PDE3BQ13370 1112 aa23.05■■□□□ 1.28
PDE9A-203ENST00000335440 CYP27B1O15528 508 aa23.05■■□□□ 1.28
PDE9A-203ENST00000335440 IFNL2Q8IZJ0 200 aa23.05■■□□□ 1.28
PDE9A-203ENST00000335440 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
PDE9A-203ENST00000335440 HNRNPUQ00839 825 aaKnown RBP eCLIP23.04■■□□□ 1.28
PDE9A-203ENST00000335440 C1orf141Q5JVX7 400 aa23.04■■□□□ 1.28
PDE9A-203ENST00000335440 NFE2L2Q16236 605 aa23.03■■□□□ 1.28
PDE9A-203ENST00000335440 AKAP4Q5JQC9 854 aa23.03■■□□□ 1.28
PDE9A-203ENST00000335440 DDX54Q8TDD1 881 aaKnown RBP23.03■■□□□ 1.28
PDE9A-203ENST00000335440 APAF1O14727 1248 aa23.02■■□□□ 1.28
PDE9A-203ENST00000335440 PHKG2P15735 406 aa23.02■■□□□ 1.28
PDE9A-203ENST00000335440 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
PDE9A-203ENST00000335440 MAP3K5Q99683 1374 aa23.01■■□□□ 1.27
PDE9A-203ENST00000335440 ADAMTS7Q9UKP4 1686 aa23.01■■□□□ 1.27
PDE9A-203ENST00000335440 HSP90AB1P08238 724 aaKnown RBP23.01■■□□□ 1.27
PDE9A-203ENST00000335440 KRT27Q7Z3Y8 459 aa23.01■■□□□ 1.27
PDE9A-203ENST00000335440 MARCH10Q8NA82 808 aaPredicted RBP23■■□□□ 1.27
PDE9A-203ENST00000335440 SBF2Q86WG5 1849 aa23■■□□□ 1.27
PDE9A-203ENST00000335440 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
PDE9A-203ENST00000335440 NKX1-1Q15270 411 aaPredicted RBP22.99■■□□□ 1.27
PDE9A-203ENST00000335440 NGEFQ8N5V2 710 aa22.99■■□□□ 1.27
PDE9A-203ENST00000335440 DOT1LQ8TEK3 1739 aa22.98■■□□□ 1.27
PDE9A-203ENST00000335440 BCL9O00512 1426 aa22.98■■□□□ 1.27
PDE9A-203ENST00000335440 RIPK4P57078 832 aa22.98■■□□□ 1.27
PDE9A-203ENST00000335440 ITGB4P16144 1822 aa22.98■■□□□ 1.27
PDE9A-203ENST00000335440 TOGARAM1Q9Y4F4 1720 aa22.97■■□□□ 1.27
PDE9A-203ENST00000335440 HTATSF1O43719 755 aaKnown RBP22.97■■□□□ 1.27
PDE9A-203ENST00000335440 LMOD3Q0VAK6 560 aa22.97■■□□□ 1.27
PDE9A-203ENST00000335440 NCBP3Q53F19 620 aaKnown RBP22.97■■□□□ 1.27
PDE9A-203ENST00000335440 DCAF5Q96JK2 942 aa22.97■■□□□ 1.27
PDE9A-203ENST00000335440 RRP7AQ9Y3A4 280 aaKnown RBP22.97■■□□□ 1.27
PDE9A-203ENST00000335440 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
PDE9A-203ENST00000335440 NEUROD2Q15784 382 aa22.96■■□□□ 1.27
PDE9A-203ENST00000335440 RTF1Q92541 710 aaKnown RBP22.96■■□□□ 1.27
PDE9A-203ENST00000335440 KDM6AO15550 1401 aaPredicted RBP22.95■■□□□ 1.27
PDE9A-203ENST00000335440 MPRIPQ6WCQ1 1025 aa22.94■■□□□ 1.26
PDE9A-203ENST00000335440 SIPA1L3O60292 1781 aaPredicted RBP22.93■■□□□ 1.26
PDE9A-203ENST00000335440 CCDC27Q2M243 656 aa22.93■■□□□ 1.26
PDE9A-203ENST00000335440 CEMIPQ8WUJ3 1361 aa22.93■■□□□ 1.26
PDE9A-203ENST00000335440 FAM196AQ6ZSG2 479 aa22.92■■□□□ 1.26
PDE9A-203ENST00000335440 NHSQ6T4R5 1651 aa22.92■■□□□ 1.26
PDE9A-203ENST00000335440 TRIM35Q9UPQ4 493 aa22.91■■□□□ 1.26
PDE9A-203ENST00000335440 MRC1P22897 1456 aa22.91■■□□□ 1.26
PDE9A-203ENST00000335440 RNMTO43148 476 aaKnown RBP22.91■■□□□ 1.26
PDE9A-203ENST00000335440 FAM182BQ5T319 152 aa22.91■■□□□ 1.26
PDE9A-203ENST00000335440 IL17REQ8NFR9 667 aa22.91■■□□□ 1.26
PDE9A-203ENST00000335440 ERVV-2B6SEH9 535 aa22.9■■□□□ 1.26
PDE9A-203ENST00000335440 MCM10Q7L590 875 aa22.9■■□□□ 1.26
PDE9A-203ENST00000335440 LGR6Q9HBX8 967 aa22.9■■□□□ 1.26
PDE9A-203ENST00000335440 SENP3-EIF4A1A0A087X0R7 540 aa22.88■■□□□ 1.25
PDE9A-203ENST00000335440 DCTN1Q14203 1278 aa22.88■■□□□ 1.25
PDE9A-203ENST00000335440 WWC1Q8IX03 1113 aa22.87■■□□□ 1.25
PDE9A-203ENST00000335440 SALL2Q9Y467 1007 aaPredicted RBP22.87■■□□□ 1.25
PDE9A-203ENST00000335440 TEFQ10587 303 aa22.86■■□□□ 1.25
PDE9A-203ENST00000335440 BTAF1O14981 1849 aa22.86■■□□□ 1.25
PDE9A-203ENST00000335440 CALD1Q05682 793 aaKnown RBP22.85■■□□□ 1.25
PDE9A-203ENST00000335440 SLC52A2Q9HAB3 445 aa22.85■■□□□ 1.25
PDE9A-203ENST00000335440 CABP4P57796 275 aa22.85■■□□□ 1.25
PDE9A-203ENST00000335440 ACSBG1Q96GR2 724 aa22.85■■□□□ 1.25
PDE9A-203ENST00000335440 THUMPD2Q9BTF0 503 aaKnown RBP22.85■■□□□ 1.25
PDE9A-203ENST00000335440 CENPBP07199 599 aaPredicted RBP22.84■■□□□ 1.25
PDE9A-203ENST00000335440 PRIM1P49642 420 aaKnown RBP22.84■■□□□ 1.25
PDE9A-203ENST00000335440 TMOD3Q9NYL9 352 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms