RNA–Protein interactions for RNA: ENST00000334828.5

PGAM1-201, Transcript of phosphoglycerate mutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAM1, Length 1,830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1-201ENST00000334828 PHF23Q9BUL5 403 aaPredicted RBP24.79■■□□□ 1.56
PGAM1-201ENST00000334828 CCDC9Q9Y3X0 531 aaKnown RBP24.79■■□□□ 1.56
PGAM1-201ENST00000334828 SPATA31A1Q5TZJ5 1347 aa24.79■■□□□ 1.56
PGAM1-201ENST00000334828 NRAPQ86VF7 1730 aa24.79■■□□□ 1.56
PGAM1-201ENST00000334828 TCP11L2Q8N4U5 519 aa24.77■■□□□ 1.56
PGAM1-201ENST00000334828 ATRNO75882 1429 aa24.77■■□□□ 1.56
PGAM1-201ENST00000334828 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.77■■□□□ 1.56
PGAM1-201ENST00000334828 SULT6B1Q6IMI4 303 aa24.77■■□□□ 1.56
PGAM1-201ENST00000334828 CRBNQ96SW2 442 aa24.77■■□□□ 1.56
PGAM1-201ENST00000334828 NCAPD2Q15021 1401 aa24.77■■□□□ 1.56
PGAM1-201ENST00000334828 FAM208AQ9UK61 1670 aaKnown RBP24.77■■□□□ 1.56
PGAM1-201ENST00000334828 FCHSD2O94868 740 aa24.76■■□□□ 1.55
PGAM1-201ENST00000334828 WWC1Q8IX03 1113 aa24.76■■□□□ 1.55
PGAM1-201ENST00000334828 GJD4Q96KN9 370 aaPredicted RBP24.76■■□□□ 1.55
PGAM1-201ENST00000334828 KDRP35968 1356 aa24.75■■□□□ 1.55
PGAM1-201ENST00000334828 PNNQ9H307 717 aaKnown RBP24.75■■□□□ 1.55
PGAM1-201ENST00000334828 FANCIQ9NVI1 1328 aa24.75■■□□□ 1.55
PGAM1-201ENST00000334828 USP35Q9P2H5 1018 aa24.75■■□□□ 1.55
PGAM1-201ENST00000334828 BARGINQ6ZT62 677 aa24.74■■□□□ 1.55
PGAM1-201ENST00000334828 USHBP1Q8N6Y0 703 aa24.74■■□□□ 1.55
PGAM1-201ENST00000334828 CDCA7Q9BWT1 371 aaPredicted RBP24.73■■□□□ 1.55
PGAM1-201ENST00000334828 NCBP3Q53F19 620 aaKnown RBP24.72■■□□□ 1.55
PGAM1-201ENST00000334828 HMOX1P09601 288 aa24.72■■□□□ 1.55
PGAM1-201ENST00000334828 C20orf194Q5TEA3 1177 aa24.72■■□□□ 1.55
PGAM1-201ENST00000334828 RAPGEF4Q8WZA2 1011 aa24.72■■□□□ 1.55
PGAM1-201ENST00000334828 RGS17Q9UGC6 210 aaPredicted RBP24.72■■□□□ 1.55
PGAM1-201ENST00000334828 PLEKHG2Q9H7P9 1386 aa24.71■■□□□ 1.55
PGAM1-201ENST00000334828 RGPD1P0DJD0 1748 aa24.71■■□□□ 1.55
PGAM1-201ENST00000334828 AEBP1Q8IUX7 1158 aa24.71■■□□□ 1.55
PGAM1-201ENST00000334828 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.71■■□□□ 1.55
PGAM1-201ENST00000334828 IL2RBP14784 551 aa24.7■■□□□ 1.55
PGAM1-201ENST00000334828 RSPH6AQ9H0K4 717 aa24.7■■□□□ 1.55
PGAM1-201ENST00000334828 TATP17735 454 aaPredicted RBP24.7■■□□□ 1.54
PGAM1-201ENST00000334828 RBM6P78332 1123 aaKnown RBP24.7■■□□□ 1.54
PGAM1-201ENST00000334828 CCDC27Q2M243 656 aa24.7■■□□□ 1.54
PGAM1-201ENST00000334828 ONECUT3O60422 494 aaPredicted RBP24.68■■□□□ 1.54
PGAM1-201ENST00000334828 NEFMP07197 916 aa24.68■■□□□ 1.54
PGAM1-201ENST00000334828 WDR63Q8IWG1 891 aa24.67■■□□□ 1.54
PGAM1-201ENST00000334828 PRKAR2BP31323 418 aa24.66■■□□□ 1.54
PGAM1-201ENST00000334828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.66■■□□□ 1.54
PGAM1-201ENST00000334828 RRP7AQ9Y3A4 280 aaKnown RBP24.66■■□□□ 1.54
PGAM1-201ENST00000334828 RXRBP28702 533 aa24.65■■□□□ 1.54
PGAM1-201ENST00000334828 FAM98CQ17RN3 349 aaKnown RBP24.65■■□□□ 1.54
PGAM1-201ENST00000334828 AMOTQ4VCS5 1084 aa24.65■■□□□ 1.54
PGAM1-201ENST00000334828 PLEKHF1Q96S99 279 aa24.65■■□□□ 1.54
PGAM1-201ENST00000334828 DISP2A7MBM2 1401 aa24.65■■□□□ 1.54
PGAM1-201ENST00000334828 RGPD2P0DJD1 1756 aa24.64■■□□□ 1.54
PGAM1-201ENST00000334828 PLEKHO1Q53GL0 409 aaPredicted RBP24.63■■□□□ 1.53
PGAM1-201ENST00000334828 POTEAQ6S8J7 498 aa24.63■■□□□ 1.53
PGAM1-201ENST00000334828 NEUROD2Q15784 382 aa24.62■■□□□ 1.53
PGAM1-201ENST00000334828 SPG7Q9UQ90 795 aa24.62■■□□□ 1.53
PGAM1-201ENST00000334828 GLI3P10071 1580 aa24.62■■□□□ 1.53
PGAM1-201ENST00000334828 OVOS2A0A0G2JMS6 1433 aa24.62■■□□□ 1.53
PGAM1-201ENST00000334828 MEGF6O75095 1541 aa24.61■■□□□ 1.53
PGAM1-201ENST00000334828 EXOC5O00471 708 aa24.61■■□□□ 1.53
PGAM1-201ENST00000334828 ZCRB1Q8TBF4 217 aaKnown RBP24.61■■□□□ 1.53
PGAM1-201ENST00000334828 MAPK8IP3Q9UPT6 1336 aa24.61■■□□□ 1.53
PGAM1-201ENST00000334828 BCAR3O75815 825 aa24.59■■□□□ 1.53
PGAM1-201ENST00000334828 DDB1Q16531 1140 aa24.59■■□□□ 1.53
PGAM1-201ENST00000334828 TCERG1O14776 1098 aaKnown RBP24.58■■□□□ 1.53
PGAM1-201ENST00000334828 GAS2L2Q8NHY3 880 aa24.58■■□□□ 1.53
PGAM1-201ENST00000334828 PHACTR3Q96KR7 559 aa24.58■■□□□ 1.53
PGAM1-201ENST00000334828 SEPT12Q8IYM1 358 aa24.58■■□□□ 1.53
PGAM1-201ENST00000334828 KDM2BQ8NHM5 1336 aa24.57■■□□□ 1.52
PGAM1-201ENST00000334828 A0A0G2JS52 829 aa24.57■■□□□ 1.52
PGAM1-201ENST00000334828 MYT1Q01538 1121 aa24.57■■□□□ 1.52
PGAM1-201ENST00000334828 MTHFSDQ2M296 383 aaKnown RBP24.55■■□□□ 1.52
PGAM1-201ENST00000334828 PCDH11XQ9BZA7 1347 aa24.54■■□□□ 1.52
PGAM1-201ENST00000334828 PCDH11YQ9BZA8 1340 aa24.54■■□□□ 1.52
PGAM1-201ENST00000334828 MSH5O43196 834 aa24.54■■□□□ 1.52
PGAM1-201ENST00000334828 MYH16Q9H6N6 1097 aa24.54■■□□□ 1.52
PGAM1-201ENST00000334828 TNS2Q63HR2 1409 aa24.53■■□□□ 1.52
PGAM1-201ENST00000334828 PARP4Q9UKK3 1724 aaKnown RBP24.53■■□□□ 1.52
PGAM1-201ENST00000334828 NFE2L2Q16236 605 aa24.53■■□□□ 1.52
PGAM1-201ENST00000334828 ZNF530Q6P9A1 599 aaPredicted RBP24.53■■□□□ 1.52
PGAM1-201ENST00000334828 IFNL2Q8IZJ0 200 aa24.53■■□□□ 1.52
PGAM1-201ENST00000334828 MS4A1P11836 297 aa24.52■■□□□ 1.52
PGAM1-201ENST00000334828 TMPOP42166 694 aaKnown RBP24.52■■□□□ 1.52
PGAM1-201ENST00000334828 PDE3AQ14432 1141 aa24.52■■□□□ 1.52
PGAM1-201ENST00000334828 C1orf141Q5JVX7 400 aa24.52■■□□□ 1.52
PGAM1-201ENST00000334828 THSD7AQ9UPZ6 1657 aa24.52■■□□□ 1.52
PGAM1-201ENST00000334828 AKAP4Q5JQC9 854 aa24.51■■□□□ 1.51
PGAM1-201ENST00000334828 RARSP54136 660 aaKnown RBP24.51■■□□□ 1.51
PGAM1-201ENST00000334828 CENPQQ7L2Z9 268 aaPredicted RBP24.51■■□□□ 1.51
PGAM1-201ENST00000334828 CYP27B1O15528 508 aa24.5■■□□□ 1.51
PGAM1-201ENST00000334828 HSP90AB1P08238 724 aaKnown RBP24.5■■□□□ 1.51
PGAM1-201ENST00000334828 DDX54Q8TDD1 881 aaKnown RBP24.5■■□□□ 1.51
PGAM1-201ENST00000334828 PHKG2P15735 406 aa24.49■■□□□ 1.51
PGAM1-201ENST00000334828 WNK3Q9BYP7 1800 aa24.49■■□□□ 1.51
PGAM1-201ENST00000334828 HTATSF1O43719 755 aaKnown RBP24.49■■□□□ 1.51
PGAM1-201ENST00000334828 TRIM35Q9UPQ4 493 aa24.49■■□□□ 1.51
PGAM1-201ENST00000334828 GNAT3A8MTJ3 354 aa24.48■■□□□ 1.51
PGAM1-201ENST00000334828 RIPK4P57078 832 aa24.47■■□□□ 1.51
PGAM1-201ENST00000334828 NKX1-1Q15270 411 aaPredicted RBP24.47■■□□□ 1.51
PGAM1-201ENST00000334828 PKD1L3Q7Z443 1732 aa24.47■■□□□ 1.51
PGAM1-201ENST00000334828 KRT27Q7Z3Y8 459 aa24.47■■□□□ 1.51
PGAM1-201ENST00000334828 ANP32EQ9BTT0 268 aa24.47■■□□□ 1.51
PGAM1-201ENST00000334828 IL16Q14005 1332 aa24.46■■□□□ 1.51
PGAM1-201ENST00000334828 LMOD3Q0VAK6 560 aa24.46■■□□□ 1.51
PGAM1-201ENST00000334828 MARCH10Q8NA82 808 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms