RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 USP19O94966 1318 aa11.53□□□□□ -0.56
SIMC1-201ENST00000332772 TWISTNBQ3B726 338 aaPredicted RBP11.53□□□□□ -0.56
SIMC1-201ENST00000332772 BACH2Q9BYV9 841 aa11.53□□□□□ -0.56
SIMC1-201ENST00000332772 NOB1Q9ULX3 412 aaKnown RBP11.53□□□□□ -0.56
SIMC1-201ENST00000332772 ALS2Q96Q42 1657 aa11.52□□□□□ -0.56
SIMC1-201ENST00000332772 MRPL50Q8N5N7 158 aaKnown RBP11.52□□□□□ -0.57
SIMC1-201ENST00000332772 BCL2L13Q9BXK5 485 aa11.52□□□□□ -0.57
SIMC1-201ENST00000332772 STRCP1A6NGW2 1772 aa11.52□□□□□ -0.57
SIMC1-201ENST00000332772 NCAPD2Q15021 1401 aa11.52□□□□□ -0.57
SIMC1-201ENST00000332772 PLEKHG2Q9H7P9 1386 aa11.51□□□□□ -0.57
SIMC1-201ENST00000332772 ABCC6O95255 1503 aa11.51□□□□□ -0.57
SIMC1-201ENST00000332772 PDE4AP27815 886 aa11.51□□□□□ -0.57
SIMC1-201ENST00000332772 RTF1Q92541 710 aaKnown RBP11.51□□□□□ -0.57
SIMC1-201ENST00000332772 LAS1LQ9Y4W2 734 aaKnown RBP11.51□□□□□ -0.57
SIMC1-201ENST00000332772 CACNA1FO60840 1977 aa11.51□□□□□ -0.57
SIMC1-201ENST00000332772 CAMTA1Q9Y6Y1 1673 aa11.51□□□□□ -0.57
SIMC1-201ENST00000332772 HDAC1Q13547 482 aaPredicted RBP11.51□□□□□ -0.57
SIMC1-201ENST00000332772 MTHFSDQ2M296 383 aaKnown RBP11.51□□□□□ -0.57
SIMC1-201ENST00000332772 THUMPD2Q9BTF0 503 aaKnown RBP11.51□□□□□ -0.57
SIMC1-201ENST00000332772 API5Q9BZZ5 524 aaKnown RBP11.51□□□□□ -0.57
SIMC1-201ENST00000332772 LMTK3Q96Q04 1460 aa11.5□□□□□ -0.57
SIMC1-201ENST00000332772 ATF3P18847 181 aa11.5□□□□□ -0.57
SIMC1-201ENST00000332772 CADPS2Q86UW7 1296 aa11.5□□□□□ -0.57
SIMC1-201ENST00000332772 TMEM94Q12767 1356 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 SOX12O15370 315 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 IGHDP01880 384 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 ARHGEF25Q86VW2 580 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 ORAI2Q96SN7 254 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 GNAT3A8MTJ3 354 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 GCP02774 474 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 KRT28Q7Z3Y7 464 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 C8orf58Q8NAV2 365 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 PCDHB15Q9Y5E8 787 aa11.49□□□□□ -0.57
SIMC1-201ENST00000332772 ABCC4O15439 1325 aa11.48□□□□□ -0.57
SIMC1-201ENST00000332772 FOXO3O43524 673 aa11.48□□□□□ -0.57
SIMC1-201ENST00000332772 TSPYL6Q8N831 410 aa11.48□□□□□ -0.57
SIMC1-201ENST00000332772 CHMP4AQ9BY43 222 aa11.48□□□□□ -0.57
SIMC1-201ENST00000332772 VIRMAQ69YN4 1812 aaKnown RBP11.48□□□□□ -0.57
SIMC1-201ENST00000332772 PTPRCP08575 1304 aa11.48□□□□□ -0.57
SIMC1-201ENST00000332772 MAP3K5Q99683 1374 aa11.48□□□□□ -0.57
SIMC1-201ENST00000332772 ANP32AP39687 249 aaKnown RBP11.47□□□□□ -0.57
SIMC1-201ENST00000332772 FAM161AQ3B820 660 aa11.47□□□□□ -0.57
SIMC1-201ENST00000332772 NUTM2GQ5VZR2 741 aa11.47□□□□□ -0.57
SIMC1-201ENST00000332772 ITPRIPQ8IWB1 547 aa11.47□□□□□ -0.57
SIMC1-201ENST00000332772 TMEM57Q8N5G2 664 aa11.47□□□□□ -0.57
SIMC1-201ENST00000332772 TNNQ9UQP3 1299 aa11.47□□□□□ -0.57
SIMC1-201ENST00000332772 OVOS2A0A0G2JMS6 1433 aa11.47□□□□□ -0.57
SIMC1-201ENST00000332772 LMO7Q8WWI1 1683 aa11.47□□□□□ -0.57
SIMC1-201ENST00000332772 DCTN1Q14203 1278 aa11.46□□□□□ -0.57
SIMC1-201ENST00000332772 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
SIMC1-201ENST00000332772 RBM33Q96EV2 1170 aaKnown RBP11.46□□□□□ -0.57
SIMC1-201ENST00000332772 NPHP3Q7Z494 1330 aa11.46□□□□□ -0.57
SIMC1-201ENST00000332772 STRCQ7RTU9 1775 aa11.46□□□□□ -0.57
SIMC1-201ENST00000332772 MSH6P52701 1360 aa11.46□□□□□ -0.57
SIMC1-201ENST00000332772 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
SIMC1-201ENST00000332772 AMOTQ4VCS5 1084 aa11.46□□□□□ -0.58
SIMC1-201ENST00000332772 MCM10Q7L590 875 aa11.46□□□□□ -0.58
SIMC1-201ENST00000332772 MED1Q15648 1581 aaPredicted RBP11.46□□□□□ -0.58
SIMC1-201ENST00000332772 XIRP1Q702N8 1843 aaKnown RBP11.45□□□□□ -0.58
SIMC1-201ENST00000332772 CEMIPQ8WUJ3 1361 aa11.45□□□□□ -0.58
SIMC1-201ENST00000332772 ZBTB7BO15156 539 aaPredicted RBP11.44□□□□□ -0.58
SIMC1-201ENST00000332772 INTS3Q68E01 1043 aaKnown RBP11.44□□□□□ -0.58
SIMC1-201ENST00000332772 SMC5Q8IY18 1101 aa11.44□□□□□ -0.58
SIMC1-201ENST00000332772 TSPYL4Q9UJ04 414 aa11.44□□□□□ -0.58
SIMC1-201ENST00000332772 TAF7Q15545 349 aaPredicted RBP11.43□□□□□ -0.58
SIMC1-201ENST00000332772 PLEKHO1Q53GL0 409 aaPredicted RBP11.43□□□□□ -0.58
SIMC1-201ENST00000332772 NBPF6Q5VWK0 638 aa11.43□□□□□ -0.58
SIMC1-201ENST00000332772 NBPF4Q96M43 638 aa11.43□□□□□ -0.58
SIMC1-201ENST00000332772 CRYBG1Q9Y4K1 1723 aa11.43□□□□□ -0.58
SIMC1-201ENST00000332772 TNS3Q68CZ2 1445 aa11.43□□□□□ -0.58
SIMC1-201ENST00000332772 RGPD2P0DJD1 1756 aa11.42□□□□□ -0.58
SIMC1-201ENST00000332772 HOXB7P09629 217 aa11.42□□□□□ -0.58
SIMC1-201ENST00000332772 IPO9Q96P70 1041 aaKnown RBP11.42□□□□□ -0.58
SIMC1-201ENST00000332772 PXDNQ92626 1479 aa11.42□□□□□ -0.58
SIMC1-201ENST00000332772 COL18A1P39060 1754 aa11.42□□□□□ -0.58
SIMC1-201ENST00000332772 ADAMTS7Q9UKP4 1686 aa11.42□□□□□ -0.58
SIMC1-201ENST00000332772 C8orf34Q49A92 452 aa11.42□□□□□ -0.58
SIMC1-201ENST00000332772 AKAP4Q5JQC9 854 aa11.42□□□□□ -0.58
SIMC1-201ENST00000332772 GCC1Q96CN9 775 aa11.42□□□□□ -0.58
SIMC1-201ENST00000332772 KDM3BQ7LBC6 1761 aa11.42□□□□□ -0.58
SIMC1-201ENST00000332772 ELL2O00472 640 aaPredicted RBP11.41□□□□□ -0.58
SIMC1-201ENST00000332772 IL17REQ8NFR9 667 aa11.41□□□□□ -0.58
SIMC1-201ENST00000332772 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
SIMC1-201ENST00000332772 N4BP2Q86UW6 1770 aaPredicted RBP11.41□□□□□ -0.58
SIMC1-201ENST00000332772 CPDO75976 1380 aa11.41□□□□□ -0.58
SIMC1-201ENST00000332772 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.58
SIMC1-201ENST00000332772 CCDC30Q5VVM6 783 aa11.4□□□□□ -0.58
SIMC1-201ENST00000332772 ANKRD24Q8TF21 1146 aa11.4□□□□□ -0.58
SIMC1-201ENST00000332772 LTV1Q96GA3 475 aaPredicted RBP11.4□□□□□ -0.58
SIMC1-201ENST00000332772 RGS12O14924 1447 aa11.4□□□□□ -0.58
SIMC1-201ENST00000332772 SPATA31A3Q5VYP0 1347 aa11.4□□□□□ -0.58
SIMC1-201ENST00000332772 RGS3P49796 1198 aa11.4□□□□□ -0.59
SIMC1-201ENST00000332772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.4□□□□□ -0.59
SIMC1-201ENST00000332772 ERBB3P21860 1342 aa11.39□□□□□ -0.59
SIMC1-201ENST00000332772 RGPD5Q99666 1765 aa11.39□□□□□ -0.59
SIMC1-201ENST00000332772 DDRGK1Q96HY6 314 aa11.39□□□□□ -0.59
SIMC1-201ENST00000332772 STK31Q9BXU1 1019 aa11.39□□□□□ -0.59
SIMC1-201ENST00000332772 HSPA2P54652 639 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms