RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 MTFR1LQ9H019 292 aa24.55■■□□□ 1.52
PTPMT1-201ENST00000326656 MYOM1P52179 1685 aa24.55■■□□□ 1.52
PTPMT1-201ENST00000326656 ZBTB7AO95365 584 aa24.54■■□□□ 1.52
PTPMT1-201ENST00000326656 HSP90AB2PQ58FF8 381 aa24.54■■□□□ 1.52
PTPMT1-201ENST00000326656 PAPPAQ13219 1627 aa24.53■■□□□ 1.52
PTPMT1-201ENST00000326656 NSD3Q9BZ95 1437 aa24.53■■□□□ 1.52
PTPMT1-201ENST00000326656 MEGF6O75095 1541 aa24.53■■□□□ 1.52
PTPMT1-201ENST00000326656 PTGER2P43116 358 aa24.53■■□□□ 1.52
PTPMT1-201ENST00000326656 PRIM1P49642 420 aaKnown RBP24.53■■□□□ 1.52
PTPMT1-201ENST00000326656 TATP17735 454 aaPredicted RBP24.52■■□□□ 1.52
PTPMT1-201ENST00000326656 LRRC4BQ9NT99 713 aa24.51■■□□□ 1.51
PTPMT1-201ENST00000326656 SHANK3Q9BYB0 1731 aa24.51■■□□□ 1.51
PTPMT1-201ENST00000326656 SYTL4Q96C24 671 aaPredicted RBP24.5■■□□□ 1.51
PTPMT1-201ENST00000326656 ATF5Q9Y2D1 282 aaPredicted RBP24.5■■□□□ 1.51
PTPMT1-201ENST00000326656 HMGB2P26583 209 aaKnown RBP24.49■■□□□ 1.51
PTPMT1-201ENST00000326656 EIF4G2P78344 907 aaKnown RBP eCLIP24.48■■□□□ 1.51
PTPMT1-201ENST00000326656 SLC16A10Q8TF71 515 aa24.48■■□□□ 1.51
PTPMT1-201ENST00000326656 AKT1S1Q96B36 256 aa24.48■■□□□ 1.51
PTPMT1-201ENST00000326656 DOT1LQ8TEK3 1739 aa24.47■■□□□ 1.51
PTPMT1-201ENST00000326656 USHBP1Q8N6Y0 703 aa24.47■■□□□ 1.51
PTPMT1-201ENST00000326656 SGIP1Q9BQI5 828 aa24.47■■□□□ 1.51
PTPMT1-201ENST00000326656 NSD2O96028 1365 aa24.46■■□□□ 1.51
PTPMT1-201ENST00000326656 WASHC2AQ641Q2 1341 aa24.46■■□□□ 1.51
PTPMT1-201ENST00000326656 PCDH11XQ9BZA7 1347 aa24.46■■□□□ 1.51
PTPMT1-201ENST00000326656 PCDH11YQ9BZA8 1340 aa24.46■■□□□ 1.51
PTPMT1-201ENST00000326656 LY75O60449 1722 aa24.45■■□□□ 1.5
PTPMT1-201ENST00000326656 QSER1Q2KHR3 1735 aa24.45■■□□□ 1.5
PTPMT1-201ENST00000326656 ZNF827Q17R98 1081 aa24.45■■□□□ 1.5
PTPMT1-201ENST00000326656 EMILIN1Q9Y6C2 1016 aa24.45■■□□□ 1.5
PTPMT1-201ENST00000326656 ANKRD26Q9UPS8 1709 aa24.44■■□□□ 1.5
PTPMT1-201ENST00000326656 MAP2P11137 1827 aaKnown RBP24.43■■□□□ 1.5
PTPMT1-201ENST00000326656 CCER1Q8TC90 406 aaPredicted RBP24.43■■□□□ 1.5
PTPMT1-201ENST00000326656 NCAPD2Q15021 1401 aa24.43■■□□□ 1.5
PTPMT1-201ENST00000326656 PPM1GO15355 546 aaPredicted RBP24.41■■□□□ 1.5
PTPMT1-201ENST00000326656 ARXQ96QS3 562 aa24.41■■□□□ 1.5
PTPMT1-201ENST00000326656 SYT17Q9BSW7 474 aa24.4■■□□□ 1.5
PTPMT1-201ENST00000326656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.4■■□□□ 1.5
PTPMT1-201ENST00000326656 TFCP2L1Q9NZI6 479 aa24.4■■□□□ 1.5
PTPMT1-201ENST00000326656 POLKQ9UBT6 870 aa24.4■■□□□ 1.5
PTPMT1-201ENST00000326656 CCNL1Q9UK58 526 aaPredicted RBP24.4■■□□□ 1.5
PTPMT1-201ENST00000326656 HSPA5P11021 654 aaKnown RBP24.39■■□□□ 1.49
PTPMT1-201ENST00000326656 FHDC1Q9C0D6 1143 aaPredicted RBP24.39■■□□□ 1.49
PTPMT1-201ENST00000326656 MAP3K5Q99683 1374 aa24.39■■□□□ 1.49
PTPMT1-201ENST00000326656 CYP27B1O15528 508 aa24.38■■□□□ 1.49
PTPMT1-201ENST00000326656 POLR3GLQ9BT43 218 aa24.38■■□□□ 1.49
PTPMT1-201ENST00000326656 SPG7Q9UQ90 795 aa24.38■■□□□ 1.49
PTPMT1-201ENST00000326656 NKX1-1Q15270 411 aaPredicted RBP24.37■■□□□ 1.49
PTPMT1-201ENST00000326656 PNPLA7Q6ZV29 1317 aa24.36■■□□□ 1.49
PTPMT1-201ENST00000326656 PKD1L3Q7Z443 1732 aa24.36■■□□□ 1.49
PTPMT1-201ENST00000326656 EYA1Q99502 592 aa24.36■■□□□ 1.49
PTPMT1-201ENST00000326656 COL24A1Q17RW2 1714 aa24.35■■□□□ 1.49
PTPMT1-201ENST00000326656 PLEKHG2Q9H7P9 1386 aa24.35■■□□□ 1.49
PTPMT1-201ENST00000326656 KCNQ4P56696 695 aa24.35■■□□□ 1.49
PTPMT1-201ENST00000326656 SMARCC1Q92922 1105 aaPredicted RBP24.35■■□□□ 1.49
PTPMT1-201ENST00000326656 POLD1P28340 1107 aa24.34■■□□□ 1.49
PTPMT1-201ENST00000326656 PANK3Q9H999 370 aa24.34■■□□□ 1.49
PTPMT1-201ENST00000326656 MPRIPQ6WCQ1 1025 aa24.33■■□□□ 1.49
PTPMT1-201ENST00000326656 ITGB4P16144 1822 aa24.31■■□□□ 1.48
PTPMT1-201ENST00000326656 TUBGCP6Q96RT7 1819 aa24.31■■□□□ 1.48
PTPMT1-201ENST00000326656 FLAD1Q8NFF5 587 aa24.3■■□□□ 1.48
PTPMT1-201ENST00000326656 PALLDQ8WX93 1383 aa24.29■■□□□ 1.48
PTPMT1-201ENST00000326656 EIF4A2Q14240 407 aaKnown RBP24.29■■□□□ 1.48
PTPMT1-201ENST00000326656 TNNT2P45379 298 aaPredicted RBP24.28■■□□□ 1.48
PTPMT1-201ENST00000326656 IFNL2Q8IZJ0 200 aa24.28■■□□□ 1.48
PTPMT1-201ENST00000326656 PIGBQ92521 554 aa24.27■■□□□ 1.48
PTPMT1-201ENST00000326656 C5P01031 1676 aa24.27■■□□□ 1.48
PTPMT1-201ENST00000326656 COL23A1Q86Y22 540 aaPredicted RBP24.26■■□□□ 1.47
PTPMT1-201ENST00000326656 TOGARAM1Q9Y4F4 1720 aa24.26■■□□□ 1.47
PTPMT1-201ENST00000326656 TAF1LQ8IZX4 1826 aa24.25■■□□□ 1.47
PTPMT1-201ENST00000326656 IGSF1Q8N6C5 1336 aa24.25■■□□□ 1.47
PTPMT1-201ENST00000326656 PHKG2P15735 406 aa24.24■■□□□ 1.47
PTPMT1-201ENST00000326656 MORC1Q86VD1 984 aa24.24■■□□□ 1.47
PTPMT1-201ENST00000326656 TMOD3Q9NYL9 352 aa24.24■■□□□ 1.47
PTPMT1-201ENST00000326656 KNSTRNQ9Y448 316 aa24.24■■□□□ 1.47
PTPMT1-201ENST00000326656 MSH5O43196 834 aa24.23■■□□□ 1.47
PTPMT1-201ENST00000326656 HSP90AB1P08238 724 aaKnown RBP24.21■■□□□ 1.47
PTPMT1-201ENST00000326656 CHD4Q14839 1912 aa24.2■■□□□ 1.46
PTPMT1-201ENST00000326656 LOC102724428A0A0B4J2F2 783 aa24.19■■□□□ 1.46
PTPMT1-201ENST00000326656 SIK1P57059 783 aa24.19■■□□□ 1.46
PTPMT1-201ENST00000326656 AMOTQ4VCS5 1084 aa24.19■■□□□ 1.46
PTPMT1-201ENST00000326656 PLEKHO1Q53GL0 409 aaPredicted RBP24.19■■□□□ 1.46
PTPMT1-201ENST00000326656 ZNF784Q8NCA9 323 aaPredicted RBP24.19■■□□□ 1.46
PTPMT1-201ENST00000326656 AK7Q96M32 723 aa24.19■■□□□ 1.46
PTPMT1-201ENST00000326656 C4BP0C0L5 1744 aa24.18■■□□□ 1.46
PTPMT1-201ENST00000326656 ERVV-2B6SEH9 535 aa24.18■■□□□ 1.46
PTPMT1-201ENST00000326656 GPR162Q16538 588 aa24.17■■□□□ 1.46
PTPMT1-201ENST00000326656 DCAF5Q96JK2 942 aa24.17■■□□□ 1.46
PTPMT1-201ENST00000326656 KLHL34Q8N239 644 aa24.16■■□□□ 1.46
PTPMT1-201ENST00000326656 ASAP1Q9ULH1 1129 aa24.16■■□□□ 1.46
PTPMT1-201ENST00000326656 UTRNP46939 3433 aa24.15■■□□□ 1.46
PTPMT1-201ENST00000326656 SSFA2P28290 1259 aa24.14■■□□□ 1.45
PTPMT1-201ENST00000326656 AMER1Q5JTC6 1135 aaPredicted RBP24.14■■□□□ 1.45
PTPMT1-201ENST00000326656 ATG3Q9NT62 314 aa24.14■■□□□ 1.45
PTPMT1-201ENST00000326656 CD2APQ9Y5K6 639 aa24.13■■□□□ 1.45
PTPMT1-201ENST00000326656 UBR3Q6ZT12 1888 aa24.13■■□□□ 1.45
PTPMT1-201ENST00000326656 KIF7Q2M1P5 1343 aa24.12■■□□□ 1.45
PTPMT1-201ENST00000326656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.12■■□□□ 1.45
PTPMT1-201ENST00000326656 ATP6V1AP38606 617 aa24.12■■□□□ 1.45
PTPMT1-201ENST00000326656 KDRP35968 1356 aa24.11■■□□□ 1.45
PTPMT1-201ENST00000326656 MSL1Q68DK7 614 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms