RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 NWD2Q9ULI1 1742 aa4.58□□□□□ -1.68
SCAMP1-201ENST00000320280 EDC4Q6P2E9 1401 aaKnown RBP4.58□□□□□ -1.68
SCAMP1-201ENST00000320280 C1orf167Q5SNV9 1468 aa4.58□□□□□ -1.68
SCAMP1-201ENST00000320280 SLIT3O75094 1523 aa4.58□□□□□ -1.68
SCAMP1-201ENST00000320280 COL16A1Q07092 1604 aaPredicted RBP4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 PLEKHG3A1L390 1219 aa4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 PSDA5PKW4 1024 aaPredicted RBP4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 BCAMP50895 628 aa4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 NBR1Q14596 966 aa4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 TESK2Q96S53 571 aa4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 TTC21AQ8NDW8 1320 aa4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 TMEM94Q12767 1356 aa4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 WASLO00401 505 aaPredicted RBP4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 PCDHGA10Q9Y5H3 936 aa4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 USP31Q70CQ4 1352 aa4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 CCDC7Q96M83 1385 aa4.57□□□□□ -1.68
SCAMP1-201ENST00000320280 PIK3C2AO00443 1686 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 PXDNQ92626 1479 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 SSH2Q76I76 1423 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 FOSBP53539 338 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 POGKQ9P215 609 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 HCSTQ9UBK5 93 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 VPS9D1Q9Y2B5 631 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 CAMTA1Q9Y6Y1 1673 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 INSRP06213 1382 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 TSR1Q2NL82 804 aaKnown RBP4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 KDM2AQ9Y2K7 1162 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 PLCH1Q4KWH8 1693 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 SMG6Q86US8 1419 aaKnown RBP4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 ARHGEF10O15013 1369 aa4.56□□□□□ -1.68
SCAMP1-201ENST00000320280 COL9A1P20849 921 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 PROSER2Q86WR7 435 aaPredicted RBP4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 BCANQ96GW7 911 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 PRAM1Q96QH2 718 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 CD163L1Q9NR16 1453 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 COL14A1Q05707 1796 aaKnown RBP4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 NBPF3Q9H094 633 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 USP6P35125 1406 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 PPIP5K1Q6PFW1 1433 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 WNK3Q9BYP7 1800 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 TOM1O60784 492 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 HSPA5P11021 654 aaKnown RBP4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 NBPF1Q3BBV0 1214 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 BCL2L12Q9HB09 334 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 TERF2IPQ9NYB0 399 aa4.55□□□□□ -1.68
SCAMP1-201ENST00000320280 RTL1A6NKG5 1358 aa4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 CGNL1Q0VF96 1302 aa4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 NPHP3Q7Z494 1330 aa4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 ATF3P18847 181 aa4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 HSPA2P54652 639 aa4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 TNS3Q68CZ2 1445 aa4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 PSME1Q06323 249 aa4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 SLC26A8Q96RN1 970 aa4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 KIAA1468Q9P260 1216 aa4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 AMER1Q5JTC6 1135 aaPredicted RBP4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 CERKQ8TCT0 537 aa4.54□□□□□ -1.68
SCAMP1-201ENST00000320280 AATKQ6ZMQ8 1374 aa4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 DISP3Q9P2K9 1392 aa4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 PLEKHH1Q9ULM0 1364 aa4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 ZNF335Q9H4Z2 1342 aaPredicted RBP4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 HDGFL2Q7Z4V5 671 aaPredicted RBP4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 OVOS2A0A0J9YW53 1432 aa4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 OVOS2Q6IE36 1432 aa4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 LTN1O94822 1766 aa4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 ST20-MTHFSA0A0A6YYL1 179 aa4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 TRAK1Q9UPV9 953 aa4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 BBXQ8WY36 941 aaPredicted RBP4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 ZBED2Q9BTP6 218 aa4.53□□□□□ -1.68
SCAMP1-201ENST00000320280 LMO7Q8WWI1 1683 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 SOS2Q07890 1332 aaPredicted RBP4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 NRAPQ86VF7 1730 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 CDK19Q9BWU1 502 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 NFAT5O94916 1531 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 KIF7Q2M1P5 1343 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 COL18A1P39060 1754 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 HRO43593 1189 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 C6orf132Q5T0Z8 1188 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 TMEM132EQ6IEE7 984 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 NUDT16Q96DE0 195 aaKnown RBP4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 TSHZ2Q9NRE2 1034 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 USP19O94966 1318 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 CDK12Q9NYV4 1490 aaPredicted RBP4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 CPDO75976 1380 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 PTGER2P43116 358 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 ANKK1Q8NFD2 765 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 WBP1LQ9NX94 342 aa4.52□□□□□ -1.69
SCAMP1-201ENST00000320280 THSD4Q6ZMP0 1018 aa4.51□□□□□ -1.69
SCAMP1-201ENST00000320280 RGPD1P0DJD0 1748 aa4.51□□□□□ -1.69
SCAMP1-201ENST00000320280 BLMP54132 1417 aaPredicted RBP4.51□□□□□ -1.69
SCAMP1-201ENST00000320280 PARP4Q9UKK3 1724 aaKnown RBP4.51□□□□□ -1.69
SCAMP1-201ENST00000320280 SPATA31A6Q5VVP1 1343 aa4.51□□□□□ -1.69
SCAMP1-201ENST00000320280 A0A1W2PP64 1363 aa4.51□□□□□ -1.69
SCAMP1-201ENST00000320280 E2F4Q16254 413 aa4.51□□□□□ -1.69
SCAMP1-201ENST00000320280 ZFRQ96KR1 1074 aaKnown RBP4.51□□□□□ -1.69
SCAMP1-201ENST00000320280 JCADQ9P266 1359 aa4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 RALBP1Q15311 655 aa4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 TYW1BQ6NUM6 668 aa4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 SLAIN2Q9P270 581 aa4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 MAP2P11137 1827 aaKnown RBP4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 PRR36Q9H6K5 1346 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms