RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CSPP1Q1MSJ5 1256 aa11.82□□□□□ -0.52
PTPRA-202ENST00000318266 A0A1W2PP64 1363 aa11.82□□□□□ -0.52
PTPRA-202ENST00000318266 DYNC1I1O14576 645 aa11.82□□□□□ -0.52
PTPRA-202ENST00000318266 TTC22Q5TAA0 569 aa11.82□□□□□ -0.52
PTPRA-202ENST00000318266 SASS6Q6UVJ0 657 aa11.82□□□□□ -0.52
PTPRA-202ENST00000318266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.82□□□□□ -0.521e-6■■■□□ 16.5
PTPRA-202ENST00000318266 IL16Q14005 1332 aa11.82□□□□□ -0.52
PTPRA-202ENST00000318266 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
PTPRA-202ENST00000318266 MYOM2P54296 1465 aa11.82□□□□□ -0.52
PTPRA-202ENST00000318266 UBAP1LF5GYI3 381 aa11.82□□□□□ -0.52
PTPRA-202ENST00000318266 FYB1O15117 783 aa11.82□□□□□ -0.52
PTPRA-202ENST00000318266 SDSP20132 328 aa11.82□□□□□ -0.52
PTPRA-202ENST00000318266 INTS3Q68E01 1043 aaKnown RBP11.82□□□□□ -0.52
PTPRA-202ENST00000318266 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.81□□□□□ -0.523e-6■■□□□ 11.9
PTPRA-202ENST00000318266 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
PTPRA-202ENST00000318266 PLCB2Q00722 1185 aa11.81□□□□□ -0.52
PTPRA-202ENST00000318266 ADGRB2O60241 1585 aa11.81□□□□□ -0.52
PTPRA-202ENST00000318266 NEK4P51957 841 aa11.81□□□□□ -0.52
PTPRA-202ENST00000318266 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
PTPRA-202ENST00000318266 TSHZ3Q63HK5 1081 aa11.8□□□□□ -0.52
PTPRA-202ENST00000318266 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
PTPRA-202ENST00000318266 DCTN1Q14203 1278 aa11.8□□□□□ -0.52
PTPRA-202ENST00000318266 C8orf58Q8NAV2 365 aa11.8□□□□□ -0.52
PTPRA-202ENST00000318266 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
PTPRA-202ENST00000318266 CFAP65Q6ZU64 1925 aaKnown RBP11.8□□□□□ -0.52
PTPRA-202ENST00000318266 FAM83GA6ND36 823 aa11.79□□□□□ -0.52
PTPRA-202ENST00000318266 CBX1P83916 185 aa11.79□□□□□ -0.52
PTPRA-202ENST00000318266 CWC22Q9HCG8 908 aaKnown RBP11.79□□□□□ -0.52
PTPRA-202ENST00000318266 KIAA1210Q9ULL0 1709 aa11.79□□□□□ -0.52
PTPRA-202ENST00000318266 NCBP3Q53F19 620 aaKnown RBP11.79□□□□□ -0.52
PTPRA-202ENST00000318266 CASC1Q6TDU7 716 aa11.79□□□□□ -0.52
PTPRA-202ENST00000318266 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
PTPRA-202ENST00000318266 TTC12Q9H892 705 aaPredicted RBP11.79□□□□□ -0.52
PTPRA-202ENST00000318266 TET3O43151 1660 aa11.78□□□□□ -0.52
PTPRA-202ENST00000318266 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
PTPRA-202ENST00000318266 TSPY26PQ9H489 355 aa11.78□□□□□ -0.52
PTPRA-202ENST00000318266 USP25Q9UHP3 1055 aa11.78□□□□□ -0.52
PTPRA-202ENST00000318266 CEBPAP49715 358 aaPredicted RBP11.78□□□□□ -0.52
PTPRA-202ENST00000318266 KRT24Q2M2I5 525 aa11.78□□□□□ -0.52
PTPRA-202ENST00000318266 NSD2O96028 1365 aa11.78□□□□□ -0.52
PTPRA-202ENST00000318266 TMX3Q96JJ7 454 aa11.77□□□□□ -0.52
PTPRA-202ENST00000318266 GADD45BO75293 160 aaPredicted RBP11.77□□□□□ -0.53
PTPRA-202ENST00000318266 SMAP1Q8IYB5 467 aaPredicted RBP11.77□□□□□ -0.53
PTPRA-202ENST00000318266 DCTPP1Q9H773 170 aa11.77□□□□□ -0.53
PTPRA-202ENST00000318266 ABCC4O15439 1325 aa11.77□□□□□ -0.53
PTPRA-202ENST00000318266 DTNBO60941 627 aa11.77□□□□□ -0.53
PTPRA-202ENST00000318266 MCM5P33992 734 aa11.76□□□□□ -0.53
PTPRA-202ENST00000318266 TNRQ92752 1358 aa11.76□□□□□ -0.53
PTPRA-202ENST00000318266 FCHSD2O94868 740 aa11.76□□□□□ -0.53
PTPRA-202ENST00000318266 REC8O95072 547 aa11.76□□□□□ -0.53
PTPRA-202ENST00000318266 MTERF4Q7Z6M4 381 aaKnown RBP11.76□□□□□ -0.53
PTPRA-202ENST00000318266 CCDC94Q9BW85 323 aaPredicted RBP11.76□□□□□ -0.53
PTPRA-202ENST00000318266 TERF2IPQ9NYB0 399 aa11.76□□□□□ -0.53
PTPRA-202ENST00000318266 MBD3O95983 291 aa11.75□□□□□ -0.53
PTPRA-202ENST00000318266 NFE2L2Q16236 605 aa11.75□□□□□ -0.53
PTPRA-202ENST00000318266 UPF3BQ9BZI7 483 aaKnown RBP11.75□□□□□ -0.53
PTPRA-202ENST00000318266 GNAI1P63096 354 aa11.75□□□□□ -0.53
PTPRA-202ENST00000318266 ARHGAP45Q92619 1136 aa11.75□□□□□ -0.53
PTPRA-202ENST00000318266 API5Q9BZZ5 524 aaKnown RBP11.75□□□□□ -0.53
PTPRA-202ENST00000318266 NPHP4O75161 1426 aaPredicted RBP11.75□□□□□ -0.53
PTPRA-202ENST00000318266 TULP4Q9NRJ4 1543 aa11.75□□□□□ -0.53
PTPRA-202ENST00000318266 SPDYE4A6NLX3 237 aa11.75□□□□□ -0.53
PTPRA-202ENST00000318266 IGSF3O75054 1194 aa11.75□□□□□ -0.53
PTPRA-202ENST00000318266 ALKQ9UM73 1620 aa11.74□□□□□ -0.53
PTPRA-202ENST00000318266 ERC2O15083 957 aa11.74□□□□□ -0.53
PTPRA-202ENST00000318266 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
PTPRA-202ENST00000318266 CABP1Q9NZU7 370 aa11.74□□□□□ -0.53
PTPRA-202ENST00000318266 KIF1BO60333 1816 aa11.74□□□□□ -0.53
PTPRA-202ENST00000318266 MYRIPQ8NFW9 859 aa11.74□□□□□ -0.53
PTPRA-202ENST00000318266 EMILIN1Q9Y6C2 1016 aa11.74□□□□□ -0.53
PTPRA-202ENST00000318266 COL3A1P02461 1466 aaPredicted RBP11.74□□□□□ -0.53
PTPRA-202ENST00000318266 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
PTPRA-202ENST00000318266 PRAM1Q96QH2 718 aa11.73□□□□□ -0.53
PTPRA-202ENST00000318266 MEIS3Q99687 375 aa11.73□□□□□ -0.53
PTPRA-202ENST00000318266 PALD1Q9ULE6 856 aa11.73□□□□□ -0.53
PTPRA-202ENST00000318266 HCLS1P14317 486 aaPredicted RBP11.73□□□□□ -0.53
PTPRA-202ENST00000318266 NOLC1Q14978 699 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTPRA-202ENST00000318266 ZNF428Q96B54 188 aa11.73□□□□□ -0.53
PTPRA-202ENST00000318266 LARP6Q9BRS8 491 aaKnown RBP11.73□□□□□ -0.53
PTPRA-202ENST00000318266 PTCH1Q13635 1447 aa11.73□□□□□ -0.53
PTPRA-202ENST00000318266 ZNF335Q9H4Z2 1342 aaPredicted RBP11.73□□□□□ -0.53
PTPRA-202ENST00000318266 NRXN1Q9ULB1 1477 aa11.73□□□□□ -0.53
PTPRA-202ENST00000318266 ADGRB1O14514 1584 aa11.73□□□□□ -0.53
PTPRA-202ENST00000318266 SLC4A10Q6U841 1118 aa11.73□□□□□ -0.53
PTPRA-202ENST00000318266 THEMISQ8N1K5 641 aaPredicted RBP11.73□□□□□ -0.53
PTPRA-202ENST00000318266 ANO2Q9NQ90 1003 aa11.73□□□□□ -0.53
PTPRA-202ENST00000318266 ADCY5O95622 1261 aa11.72□□□□□ -0.53
PTPRA-202ENST00000318266 ZSCAN20P17040 1043 aaPredicted RBP11.72□□□□□ -0.53
PTPRA-202ENST00000318266 BRPF1P55201 1214 aaPredicted RBP11.72□□□□□ -0.53
PTPRA-202ENST00000318266 CEP85Q6P2H3 762 aa11.72□□□□□ -0.53
PTPRA-202ENST00000318266 HDGFL2Q7Z4V5 671 aaPredicted RBP11.72□□□□□ -0.53
PTPRA-202ENST00000318266 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
PTPRA-202ENST00000318266 POLKQ9UBT6 870 aa11.72□□□□□ -0.53
PTPRA-202ENST00000318266 BRD1O95696 1058 aa11.72□□□□□ -0.53
PTPRA-202ENST00000318266 USP48Q86UV5 1035 aa11.72□□□□□ -0.53
PTPRA-202ENST00000318266 ANKRD44Q8N8A2 993 aa11.72□□□□□ -0.53
PTPRA-202ENST00000318266 RILPL2Q969X0 211 aa11.72□□□□□ -0.53
PTPRA-202ENST00000318266 SYAP1Q96A49 352 aaPredicted RBP11.72□□□□□ -0.53
PTPRA-202ENST00000318266 ABCC3O15438 1527 aa11.72□□□□□ -0.53
PTPRA-202ENST00000318266 ARHGAP31Q2M1Z3 1444 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms