RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 NCAPD2Q15021 1401 aa13.14□□□□□ -0.31
GINS3-201ENST00000318129 GOLGA2Q08379 1002 aa13.14□□□□□ -0.31
GINS3-201ENST00000318129 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
GINS3-201ENST00000318129 LMO7Q8WWI1 1683 aa13.14□□□□□ -0.31
GINS3-201ENST00000318129 COL14A1Q05707 1796 aaKnown RBP13.14□□□□□ -0.31
GINS3-201ENST00000318129 GAS2L2Q8NHY3 880 aa13.13□□□□□ -0.31
GINS3-201ENST00000318129 NLRP2Q9NX02 1062 aa13.13□□□□□ -0.31
GINS3-201ENST00000318129 CAMTA1Q9Y6Y1 1673 aa13.13□□□□□ -0.31
GINS3-201ENST00000318129 GOLGB1Q14789 3259 aaKnown RBP13.13□□□□□ -0.31
GINS3-201ENST00000318129 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
GINS3-201ENST00000318129 EVA1CP58658 441 aa13.13□□□□□ -0.31
GINS3-201ENST00000318129 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
GINS3-201ENST00000318129 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
GINS3-201ENST00000318129 PLEKHG2Q9H7P9 1386 aa13.12□□□□□ -0.31
GINS3-201ENST00000318129 SPATA31A6Q5VVP1 1343 aa13.12□□□□□ -0.31
GINS3-201ENST00000318129 CALD1Q05682 793 aaKnown RBP13.11□□□□□ -0.31
GINS3-201ENST00000318129 GSE1Q14687 1217 aa13.11□□□□□ -0.31
GINS3-201ENST00000318129 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
GINS3-201ENST00000318129 COL5A2P05997 1499 aaPredicted RBP13.11□□□□□ -0.31
GINS3-201ENST00000318129 E9PSI1 815 aa13.11□□□□□ -0.31
GINS3-201ENST00000318129 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
GINS3-201ENST00000318129 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
GINS3-201ENST00000318129 HSPA1LP34931 641 aa13.1□□□□□ -0.31
GINS3-201ENST00000318129 IL16Q14005 1332 aa13.1□□□□□ -0.31
GINS3-201ENST00000318129 NUTM2BA6NNL0 878 aaPredicted RBP13.1□□□□□ -0.31
GINS3-201ENST00000318129 NUTM2EB1AL46 878 aaPredicted RBP13.1□□□□□ -0.31
GINS3-201ENST00000318129 HTATSF1O43719 755 aaKnown RBP13.1□□□□□ -0.31
GINS3-201ENST00000318129 SLFN5Q08AF3 891 aa13.1□□□□□ -0.31
GINS3-201ENST00000318129 TOM1L2Q6ZVM7 507 aa13.1□□□□□ -0.31
GINS3-201ENST00000318129 NUTM2AQ8IVF1 878 aaPredicted RBP13.1□□□□□ -0.31
GINS3-201ENST00000318129 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
GINS3-201ENST00000318129 BTG4Q9NY30 223 aa13.1□□□□□ -0.31
GINS3-201ENST00000318129 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
GINS3-201ENST00000318129 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
GINS3-201ENST00000318129 RAPGEF4Q8WZA2 1011 aa13.09□□□□□ -0.31
GINS3-201ENST00000318129 CDCA7LQ96GN5 454 aa13.09□□□□□ -0.31
GINS3-201ENST00000318129 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.32
GINS3-201ENST00000318129 TRMT2AQ8IZ69 625 aaKnown RBP13.08□□□□□ -0.32
GINS3-201ENST00000318129 STRN4Q9NRL3 753 aa13.08□□□□□ -0.32
GINS3-201ENST00000318129 DLG5Q8TDM6 1919 aa13.08□□□□□ -0.32
GINS3-201ENST00000318129 MYH16Q9H6N6 1097 aa13.08□□□□□ -0.32
GINS3-201ENST00000318129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
GINS3-201ENST00000318129 NPM2Q86SE8 214 aaKnown RBP13.07□□□□□ -0.32
GINS3-201ENST00000318129 RTF1Q92541 710 aaKnown RBP13.07□□□□□ -0.32
GINS3-201ENST00000318129 CRB1P82279 1406 aa13.07□□□□□ -0.32
GINS3-201ENST00000318129 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
GINS3-201ENST00000318129 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
GINS3-201ENST00000318129 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
GINS3-201ENST00000318129 SPG7Q9UQ90 795 aa13.06□□□□□ -0.32
GINS3-201ENST00000318129 NWD2Q9ULI1 1742 aa13.05□□□□□ -0.32
GINS3-201ENST00000318129 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
GINS3-201ENST00000318129 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
GINS3-201ENST00000318129 MAP3K5Q99683 1374 aa13.04□□□□□ -0.32
GINS3-201ENST00000318129 GNAI1P63096 354 aa13.04□□□□□ -0.32
GINS3-201ENST00000318129 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
GINS3-201ENST00000318129 ZNF530Q6P9A1 599 aaPredicted RBP13.04□□□□□ -0.32
GINS3-201ENST00000318129 IL2RBP14784 551 aa13.04□□□□□ -0.32
GINS3-201ENST00000318129 PDE4AP27815 886 aa13.04□□□□□ -0.32
GINS3-201ENST00000318129 C1orf141Q5JVX7 400 aa13.04□□□□□ -0.32
GINS3-201ENST00000318129 FAM43AQ8N2R8 423 aa13.04□□□□□ -0.32
GINS3-201ENST00000318129 NGLY1Q96IV0 654 aa13.04□□□□□ -0.32
GINS3-201ENST00000318129 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
GINS3-201ENST00000318129 IFT57Q9NWB7 429 aa13.04□□□□□ -0.32
GINS3-201ENST00000318129 SLIT2O94813 1529 aa13.04□□□□□ -0.32
GINS3-201ENST00000318129 BACH2Q9BYV9 841 aa13.03□□□□□ -0.32
GINS3-201ENST00000318129 FRAT1Q92837 279 aaPredicted RBP13.02□□□□□ -0.32
GINS3-201ENST00000318129 MEGF6O75095 1541 aa13.02□□□□□ -0.32
GINS3-201ENST00000318129 UTRNP46939 3433 aa13.02□□□□□ -0.33
GINS3-201ENST00000318129 PARP4Q9UKK3 1724 aaKnown RBP13.02□□□□□ -0.33
GINS3-201ENST00000318129 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.33
GINS3-201ENST00000318129 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.33
GINS3-201ENST00000318129 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
GINS3-201ENST00000318129 THRAP3Q9Y2W1 955 aaKnown RBP13.02□□□□□ -0.33
GINS3-201ENST00000318129 OVOS2A0A0G2JMS6 1433 aa13.02□□□□□ -0.33
GINS3-201ENST00000318129 NRAPQ86VF7 1730 aa13.02□□□□□ -0.33
GINS3-201ENST00000318129 MEX3CQ5U5Q3 659 aaKnown RBP13.01□□□□□ -0.33
GINS3-201ENST00000318129 MCM10Q7L590 875 aa13.01□□□□□ -0.33
GINS3-201ENST00000318129 CDCA7Q9BWT1 371 aaPredicted RBP13.01□□□□□ -0.33
GINS3-201ENST00000318129 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
GINS3-201ENST00000318129 ZNF853P0CG23 659 aa13.01□□□□□ -0.33
GINS3-201ENST00000318129 DCTN1Q14203 1278 aa13.01□□□□□ -0.33
GINS3-201ENST00000318129 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
GINS3-201ENST00000318129 C8orf37Q96NL8 207 aa13.01□□□□□ -0.33
GINS3-201ENST00000318129 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
GINS3-201ENST00000318129 CT47B1P0C2W7 299 aaPredicted RBP13□□□□□ -0.33
GINS3-201ENST00000318129 NFKBIBQ15653 356 aa13□□□□□ -0.33
GINS3-201ENST00000318129 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
GINS3-201ENST00000318129 BABAM1Q9NWV8 329 aa13□□□□□ -0.33
GINS3-201ENST00000318129 PKD1L3Q7Z443 1732 aa13□□□□□ -0.33
GINS3-201ENST00000318129 MS4A1P11836 297 aa13□□□□□ -0.33
GINS3-201ENST00000318129 RCAN3Q9UKA8 241 aa13□□□□□ -0.33
GINS3-201ENST00000318129 LRP6O75581 1613 aa12.99□□□□□ -0.33
GINS3-201ENST00000318129 SPATA31A1Q5TZJ5 1347 aa12.99□□□□□ -0.33
GINS3-201ENST00000318129 IL17REQ8NFR9 667 aa12.99□□□□□ -0.33
GINS3-201ENST00000318129 SPATA31A5Q5VU36 1347 aa12.99□□□□□ -0.33
GINS3-201ENST00000318129 SPATA31A7Q8IWB4 1347 aa12.99□□□□□ -0.33
GINS3-201ENST00000318129 PCDH11XQ9BZA7 1347 aa12.99□□□□□ -0.33
GINS3-201ENST00000318129 PCDH11YQ9BZA8 1340 aa12.99□□□□□ -0.33
GINS3-201ENST00000318129 CHL1O00533 1208 aa12.99□□□□□ -0.33
GINS3-201ENST00000318129 PHKG2P15735 406 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms