RNA–Protein interactions for RNA: ENST00000316824.3

ALX1-201, Transcript of ALX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX1-201ENST00000316824 TRIM35Q9UPQ4 493 aa17.14■□□□□ 0.33
ALX1-201ENST00000316824 JCADQ9P266 1359 aa17.14■□□□□ 0.33
ALX1-201ENST00000316824 ABCB7O75027 752 aa17.13■□□□□ 0.33
ALX1-201ENST00000316824 CSB-PGBD3P0DP91 1061 aa17.13■□□□□ 0.33
ALX1-201ENST00000316824 CDCA7LQ96GN5 454 aa17.13■□□□□ 0.33
ALX1-201ENST00000316824 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
ALX1-201ENST00000316824 WDR17Q8IZU2 1322 aa17.12■□□□□ 0.33
ALX1-201ENST00000316824 PLCH1Q4KWH8 1693 aa17.12■□□□□ 0.33
ALX1-201ENST00000316824 PARP4Q9UKK3 1724 aaKnown RBP17.12■□□□□ 0.33
ALX1-201ENST00000316824 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
ALX1-201ENST00000316824 TRMT2AQ8IZ69 625 aaKnown RBP17.12■□□□□ 0.33
ALX1-201ENST00000316824 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
ALX1-201ENST00000316824 LRRC37A3O60309 1634 aa17.12■□□□□ 0.33
ALX1-201ENST00000316824 AMOTQ4VCS5 1084 aa17.11■□□□□ 0.33
ALX1-201ENST00000316824 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
ALX1-201ENST00000316824 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
ALX1-201ENST00000316824 HTATSF1O43719 755 aaKnown RBP17.1■□□□□ 0.33
ALX1-201ENST00000316824 PKD1L3Q7Z443 1732 aa17.1■□□□□ 0.33
ALX1-201ENST00000316824 MAP3K5Q99683 1374 aa17.09■□□□□ 0.33
ALX1-201ENST00000316824 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
ALX1-201ENST00000316824 NRAPQ86VF7 1730 aa17.08■□□□□ 0.33
ALX1-201ENST00000316824 FAM83GA6ND36 823 aa17.08■□□□□ 0.32
ALX1-201ENST00000316824 RAPGEF4Q8WZA2 1011 aa17.08■□□□□ 0.32
ALX1-201ENST00000316824 CRB1P82279 1406 aa17.08■□□□□ 0.32
ALX1-201ENST00000316824 SPATA31A6Q5VVP1 1343 aa17.07■□□□□ 0.32
ALX1-201ENST00000316824 POLA2Q14181 598 aa17.07■□□□□ 0.32
ALX1-201ENST00000316824 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
ALX1-201ENST00000316824 RTF1Q92541 710 aaKnown RBP17.07■□□□□ 0.32
ALX1-201ENST00000316824 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
ALX1-201ENST00000316824 MEGF6O75095 1541 aa17.06■□□□□ 0.32
ALX1-201ENST00000316824 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
ALX1-201ENST00000316824 IFT57Q9NWB7 429 aa17.06■□□□□ 0.32
ALX1-201ENST00000316824 GNAT3A8MTJ3 354 aa17.05■□□□□ 0.32
ALX1-201ENST00000316824 TATP17735 454 aaPredicted RBP17.05■□□□□ 0.32
ALX1-201ENST00000316824 EVA1CP58658 441 aa17.05■□□□□ 0.32
ALX1-201ENST00000316824 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
ALX1-201ENST00000316824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.32
ALX1-201ENST00000316824 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
ALX1-201ENST00000316824 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
ALX1-201ENST00000316824 GNAI1P63096 354 aa17.04■□□□□ 0.32
ALX1-201ENST00000316824 BTG4Q9NY30 223 aa17.04■□□□□ 0.32
ALX1-201ENST00000316824 NEFLP07196 543 aa17.04■□□□□ 0.32
ALX1-201ENST00000316824 CT47B1P0C2W7 299 aaPredicted RBP17.04■□□□□ 0.32
ALX1-201ENST00000316824 WNK3Q9BYP7 1800 aa17.03■□□□□ 0.32
ALX1-201ENST00000316824 AKAP4Q5JQC9 854 aa17.03■□□□□ 0.32
ALX1-201ENST00000316824 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
ALX1-201ENST00000316824 STRN4Q9NRL3 753 aa17.03■□□□□ 0.32
ALX1-201ENST00000316824 SPG7Q9UQ90 795 aa17.03■□□□□ 0.32
ALX1-201ENST00000316824 ADAMTS7Q9UKP4 1686 aa17.03■□□□□ 0.32
ALX1-201ENST00000316824 SLIT2O94813 1529 aa17.03■□□□□ 0.32
ALX1-201ENST00000316824 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.31
ALX1-201ENST00000316824 CFAP44Q96MT7 982 aa17.02■□□□□ 0.31
ALX1-201ENST00000316824 SUPT16HQ9Y5B9 1047 aaKnown RBP17.02■□□□□ 0.31
ALX1-201ENST00000316824 RNF123Q5XPI4 1314 aa17.01■□□□□ 0.31
ALX1-201ENST00000316824 ADAMTS2O95450 1211 aa17.01■□□□□ 0.31
ALX1-201ENST00000316824 ZNF853P0CG23 659 aa17.01■□□□□ 0.31
ALX1-201ENST00000316824 LARP1Q6PKG0 1096 aaKnown RBP17.01■□□□□ 0.31
ALX1-201ENST00000316824 CEMIPQ8WUJ3 1361 aa17.01■□□□□ 0.31
ALX1-201ENST00000316824 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
ALX1-201ENST00000316824 NUTM2BA6NNL0 878 aaPredicted RBP17■□□□□ 0.31
ALX1-201ENST00000316824 NUTM2EB1AL46 878 aaPredicted RBP17■□□□□ 0.31
ALX1-201ENST00000316824 ILDR1Q86SU0 546 aaPredicted RBP17■□□□□ 0.31
ALX1-201ENST00000316824 NUTM2AQ8IVF1 878 aaPredicted RBP17■□□□□ 0.31
ALX1-201ENST00000316824 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
ALX1-201ENST00000316824 TNKS1BP1Q9C0C2 1729 aaKnown RBP17■□□□□ 0.31
ALX1-201ENST00000316824 IL2RBP14784 551 aa16.99■□□□□ 0.31
ALX1-201ENST00000316824 HSPA1LP34931 641 aa16.99■□□□□ 0.31
ALX1-201ENST00000316824 MCM10Q7L590 875 aa16.99■□□□□ 0.31
ALX1-201ENST00000316824 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
ALX1-201ENST00000316824 DCTN1Q14203 1278 aa16.98■□□□□ 0.31
ALX1-201ENST00000316824 TSR2Q969E8 191 aaKnown RBP16.98■□□□□ 0.31
ALX1-201ENST00000316824 LRP6O75581 1613 aa16.98■□□□□ 0.31
ALX1-201ENST00000316824 PCDH11XQ9BZA7 1347 aa16.98■□□□□ 0.31
ALX1-201ENST00000316824 PCDH11YQ9BZA8 1340 aa16.98■□□□□ 0.31
ALX1-201ENST00000316824 SCN11AQ9UI33 1791 aa16.97■□□□□ 0.31
ALX1-201ENST00000316824 GTF3C3Q9Y5Q9 886 aa16.97■□□□□ 0.31
ALX1-201ENST00000316824 DISP2A7MBM2 1401 aa16.97■□□□□ 0.31
ALX1-201ENST00000316824 SHANK3Q9BYB0 1731 aa16.97■□□□□ 0.31
ALX1-201ENST00000316824 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
ALX1-201ENST00000316824 ZNF428Q96B54 188 aa16.96■□□□□ 0.31
ALX1-201ENST00000316824 MBIPQ9NS73 344 aa16.96■□□□□ 0.31
ALX1-201ENST00000316824 LAS1LQ9Y4W2 734 aaKnown RBP16.96■□□□□ 0.31
ALX1-201ENST00000316824 MRC1P22897 1456 aa16.96■□□□□ 0.31
ALX1-201ENST00000316824 CHL1O00533 1208 aa16.96■□□□□ 0.3
ALX1-201ENST00000316824 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.3
ALX1-201ENST00000316824 FBXO41Q8TF61 875 aa16.96■□□□□ 0.3
ALX1-201ENST00000316824 THRAP3Q9Y2W1 955 aaKnown RBP16.96■□□□□ 0.3
ALX1-201ENST00000316824 SIPA1L3O60292 1781 aaPredicted RBP16.95■□□□□ 0.3
ALX1-201ENST00000316824 PHKG2P15735 406 aa16.95■□□□□ 0.3
ALX1-201ENST00000316824 RRP1P56182 461 aaKnown RBP16.95■□□□□ 0.3
ALX1-201ENST00000316824 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.95■□□□□ 0.3
ALX1-201ENST00000316824 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
ALX1-201ENST00000316824 CDCA7Q9BWT1 371 aaPredicted RBP16.95■□□□□ 0.3
ALX1-201ENST00000316824 KDM3BQ7LBC6 1761 aa16.94■□□□□ 0.3
ALX1-201ENST00000316824 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
ALX1-201ENST00000316824 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
ALX1-201ENST00000316824 TSPYL4Q9UJ04 414 aa16.93■□□□□ 0.3
ALX1-201ENST00000316824 KDM6AO15550 1401 aaPredicted RBP16.92■□□□□ 0.3
ALX1-201ENST00000316824 TNS2Q63HR2 1409 aa16.92■□□□□ 0.3
ALX1-201ENST00000316824 RNMTO43148 476 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms