RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 TRAK1Q9UPV9 953 aa7.75□□□□□ -1.17
SPATA9-202ENST00000316087 PNPLA6Q8IY17 1366 aa7.74□□□□□ -1.17
SPATA9-202ENST00000316087 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.74□□□□□ -1.17
SPATA9-202ENST00000316087 A6NJR5 290 aa7.74□□□□□ -1.17
SPATA9-202ENST00000316087 POTEJP0CG39 1038 aa7.74□□□□□ -1.17
SPATA9-202ENST00000316087 TRIM44Q96DX7 344 aaPredicted RBP7.74□□□□□ -1.17
SPATA9-202ENST00000316087 ZFP91Q96JP5 570 aaPredicted RBP7.74□□□□□ -1.17
SPATA9-202ENST00000316087 SCUBE2Q9NQ36 999 aa7.74□□□□□ -1.17
SPATA9-202ENST00000316087 ZBTB40Q9NUA8 1239 aa7.74□□□□□ -1.17
SPATA9-202ENST00000316087 COL3A1P02461 1466 aaPredicted RBP7.73□□□□□ -1.17
SPATA9-202ENST00000316087 KIF20BQ96Q89 1820 aa7.73□□□□□ -1.17
SPATA9-202ENST00000316087 DIAPH1O60610 1272 aaKnown RBP7.73□□□□□ -1.17
SPATA9-202ENST00000316087 RLBP1P12271 317 aa7.73□□□□□ -1.17
SPATA9-202ENST00000316087 TRIM27P14373 513 aa7.73□□□□□ -1.17
SPATA9-202ENST00000316087 PLEKHF1Q96S99 279 aa7.73□□□□□ -1.17
SPATA9-202ENST00000316087 PIK3R4Q99570 1358 aa7.72□□□□□ -1.17
SPATA9-202ENST00000316087 HSP90AA1P07900 732 aaKnown RBP7.72□□□□□ -1.17
SPATA9-202ENST00000316087 HSP90AB1P08238 724 aaKnown RBP7.72□□□□□ -1.17
SPATA9-202ENST00000316087 ATN1P54259 1190 aaPredicted RBP7.72□□□□□ -1.17
SPATA9-202ENST00000316087 EXOSC9Q06265 439 aaKnown RBP7.72□□□□□ -1.17
SPATA9-202ENST00000316087 PDE4DQ08499 809 aa7.72□□□□□ -1.17
SPATA9-202ENST00000316087 CASC1Q6TDU7 716 aa7.72□□□□□ -1.17
SPATA9-202ENST00000316087 CLEC17AQ6ZS10 378 aa7.72□□□□□ -1.17
SPATA9-202ENST00000316087 CHD1LQ86WJ1 897 aa7.72□□□□□ -1.17
SPATA9-202ENST00000316087 FAM117AQ9C073 453 aa7.72□□□□□ -1.17
SPATA9-202ENST00000316087 RRP7AQ9Y3A4 280 aaKnown RBP7.72□□□□□ -1.17
SPATA9-202ENST00000316087 CCDC61Q9Y6R9 512 aa7.72□□□□□ -1.17
SPATA9-202ENST00000316087 YEATS2Q9ULM3 1422 aa7.72□□□□□ -1.17
SPATA9-202ENST00000316087 ATP7BP35670 1465 aa7.72□□□□□ -1.17
SPATA9-202ENST00000316087 TRIM66O15016 1216 aa7.71□□□□□ -1.17
SPATA9-202ENST00000316087 GNAI1P63096 354 aa7.71□□□□□ -1.17
SPATA9-202ENST00000316087 E2F4Q16254 413 aa7.71□□□□□ -1.17
SPATA9-202ENST00000316087 SMYD5Q6GMV2 418 aa7.71□□□□□ -1.17
SPATA9-202ENST00000316087 SSH1Q8WYL5 1049 aa7.71□□□□□ -1.17
SPATA9-202ENST00000316087 API5Q9BZZ5 524 aaKnown RBP7.71□□□□□ -1.17
SPATA9-202ENST00000316087 GRPEL1Q9HAV7 217 aa7.71□□□□□ -1.17
SPATA9-202ENST00000316087 PTCH1Q13635 1447 aa7.71□□□□□ -1.17
SPATA9-202ENST00000316087 A0A1W2PP64 1363 aa7.71□□□□□ -1.18
SPATA9-202ENST00000316087 DLC1Q96QB1 1528 aa7.71□□□□□ -1.18
SPATA9-202ENST00000316087 U2SURPO15042 1029 aaKnown RBP7.71□□□□□ -1.18
SPATA9-202ENST00000316087 XRCC6P12956 609 aaKnown RBP eCLIP7.71□□□□□ -1.18
SPATA9-202ENST00000316087 DDIT3P35638 169 aa7.71□□□□□ -1.18
SPATA9-202ENST00000316087 RIPK4P57078 832 aa7.71□□□□□ -1.18
SPATA9-202ENST00000316087 NUCB2P80303 420 aa7.71□□□□□ -1.18
SPATA9-202ENST00000316087 DCAF8Q5TAQ9 597 aa7.71□□□□□ -1.18
SPATA9-202ENST00000316087 CD109Q6YHK3 1445 aa7.7□□□□□ -1.18
SPATA9-202ENST00000316087 RRP9O43818 475 aaKnown RBP7.7□□□□□ -1.18
SPATA9-202ENST00000316087 TNNT2P45379 298 aaPredicted RBP7.7□□□□□ -1.18
SPATA9-202ENST00000316087 SRPK2P78362 688 aaKnown RBP7.7□□□□□ -1.18
SPATA9-202ENST00000316087 CCDC173Q0VFZ6 552 aa7.7□□□□□ -1.18
SPATA9-202ENST00000316087 RAB3GAP1Q15042 981 aa7.7□□□□□ -1.18
SPATA9-202ENST00000316087 HS1BP3Q53T59 392 aa7.7□□□□□ -1.18
SPATA9-202ENST00000316087 KIF12Q96FN5 646 aa7.7□□□□□ -1.18
SPATA9-202ENST00000316087 FAM163AQ96GL9 167 aaPredicted RBP7.7□□□□□ -1.18
SPATA9-202ENST00000316087 SGIP1Q9BQI5 828 aa7.7□□□□□ -1.18
SPATA9-202ENST00000316087 CWC22Q9HCG8 908 aaKnown RBP7.7□□□□□ -1.18
SPATA9-202ENST00000316087 IFT57Q9NWB7 429 aa7.7□□□□□ -1.18
SPATA9-202ENST00000316087 NOB1Q9ULX3 412 aaKnown RBP7.7□□□□□ -1.18
SPATA9-202ENST00000316087 TRIM35Q9UPQ4 493 aa7.7□□□□□ -1.18
SPATA9-202ENST00000316087 FAM135BQ49AJ0 1406 aa7.69□□□□□ -1.18
SPATA9-202ENST00000316087 K7ELQ4 463 aaPredicted RBP7.69□□□□□ -1.18
SPATA9-202ENST00000316087 ONECUT3O60422 494 aaPredicted RBP7.69□□□□□ -1.18
SPATA9-202ENST00000316087 CDC45O75419 566 aa7.69□□□□□ -1.18
SPATA9-202ENST00000316087 TPM2P07951 284 aa7.69□□□□□ -1.18
SPATA9-202ENST00000316087 TERF1P54274 439 aa7.69□□□□□ -1.18
SPATA9-202ENST00000316087 RABEP1Q15276 862 aa7.69□□□□□ -1.18
SPATA9-202ENST00000316087 BCL2L13Q9BXK5 485 aa7.69□□□□□ -1.18
SPATA9-202ENST00000316087 PTPRMP28827 1452 aa7.68□□□□□ -1.18
SPATA9-202ENST00000316087 ESPNB1AK53 854 aa7.68□□□□□ -1.18
SPATA9-202ENST00000316087 TMEM57Q8N5G2 664 aa7.68□□□□□ -1.18
SPATA9-202ENST00000316087 YTHDC2Q9H6S0 1430 aaKnown RBP7.68□□□□□ -1.18
SPATA9-202ENST00000316087 CDK12Q9NYV4 1490 aaPredicted RBP7.68□□□□□ -1.18
SPATA9-202ENST00000316087 KLHL40Q2TBA0 621 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 RETREG2Q8NC44 543 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 BMP2KQ9NSY1 1161 aaPredicted RBP7.67□□□□□ -1.18
SPATA9-202ENST00000316087 TMEM131LA2VDJ0 1609 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 PREX1Q8TCU6 1659 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 AATKQ6ZMQ8 1374 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 LRRC7Q96NW7 1537 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 PLEKHG3A1L390 1219 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 FYB1O15117 783 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 ST18O60284 1047 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 MCM2P49736 904 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 NUBP1P53384 320 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 IRF5Q13568 498 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 NFE2L2Q16236 605 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 INTS3Q68E01 1043 aaKnown RBP7.67□□□□□ -1.18
SPATA9-202ENST00000316087 TMEM132EQ6IEE7 984 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 GGT6Q6P531 493 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 TNPO1Q92973 898 aaKnown RBP7.67□□□□□ -1.18
SPATA9-202ENST00000316087 TSR2Q969E8 191 aaKnown RBP7.67□□□□□ -1.18
SPATA9-202ENST00000316087 ABCC4O15439 1325 aa7.67□□□□□ -1.18
SPATA9-202ENST00000316087 CPSF1Q10570 1443 aaKnown RBP7.66□□□□□ -1.18
SPATA9-202ENST00000316087 DIP2CQ9Y2E4 1556 aa7.66□□□□□ -1.18
SPATA9-202ENST00000316087 SIGLEC1Q9BZZ2 1709 aa7.66□□□□□ -1.18
SPATA9-202ENST00000316087 ZBTB7BO15156 539 aaPredicted RBP7.66□□□□□ -1.18
SPATA9-202ENST00000316087 REC8O95072 547 aa7.66□□□□□ -1.18
SPATA9-202ENST00000316087 MCM5P33992 734 aa7.66□□□□□ -1.18
SPATA9-202ENST00000316087 RPAP2Q8IXW5 612 aaPredicted RBP7.66□□□□□ -1.18
SPATA9-202ENST00000316087 NAP1L5Q96NT1 182 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms