RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 DOCK2Q92608 1830 aa10.31□□□□□ -0.76
CNOT4-201ENST00000315544 POLKQ9UBT6 870 aa10.31□□□□□ -0.76
CNOT4-201ENST00000315544 LAMB2P55268 1798 aa10.31□□□□□ -0.76
CNOT4-201ENST00000315544 TCHHQ07283 1943 aa10.31□□□□□ -0.76
CNOT4-201ENST00000315544 TOM1O60784 492 aa10.3□□□□□ -0.76
CNOT4-201ENST00000315544 CYP2E1P05181 493 aaPredicted RBP10.3□□□□□ -0.76
CNOT4-201ENST00000315544 LAMB1P07942 1786 aa10.3□□□□□ -0.76
CNOT4-201ENST00000315544 WASLO00401 505 aaPredicted RBP10.3□□□□□ -0.76
CNOT4-201ENST00000315544 CDCA8Q53HL2 280 aa10.3□□□□□ -0.76
CNOT4-201ENST00000315544 ANKRD36CQ5JPF3 1778 aa10.3□□□□□ -0.76
CNOT4-201ENST00000315544 FAM161AQ3B820 660 aa10.29□□□□□ -0.76
CNOT4-201ENST00000315544 SLC26A8Q96RN1 970 aa10.29□□□□□ -0.76
CNOT4-201ENST00000315544 OVOS2A0A0G2JMS6 1433 aa10.29□□□□□ -0.76
CNOT4-201ENST00000315544 TCP11L2Q8N4U5 519 aa10.29□□□□□ -0.76
CNOT4-201ENST00000315544 ZBTB7BO15156 539 aaPredicted RBP10.29□□□□□ -0.76
CNOT4-201ENST00000315544 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
CNOT4-201ENST00000315544 KIF16BQ96L93 1317 aa10.28□□□□□ -0.76
CNOT4-201ENST00000315544 AFDNP55196 1824 aaKnown RBP10.28□□□□□ -0.76
CNOT4-201ENST00000315544 TMEM132EQ6IEE7 984 aa10.28□□□□□ -0.76
CNOT4-201ENST00000315544 TRIM27P14373 513 aa10.27□□□□□ -0.76
CNOT4-201ENST00000315544 CEMIPQ8WUJ3 1361 aa10.27□□□□□ -0.76
CNOT4-201ENST00000315544 NEFLP07196 543 aa10.27□□□□□ -0.77
CNOT4-201ENST00000315544 CCDC136Q96JN2 1154 aa10.27□□□□□ -0.77
CNOT4-201ENST00000315544 MYT1LQ9UL68 1186 aa10.27□□□□□ -0.77
CNOT4-201ENST00000315544 DEKP35659 375 aaKnown RBP10.27□□□□□ -0.77
CNOT4-201ENST00000315544 MTHFSP49914 203 aa10.27□□□□□ -0.77
CNOT4-201ENST00000315544 TMPOP42166 694 aaKnown RBP10.26□□□□□ -0.77
CNOT4-201ENST00000315544 MVPQ14764 893 aaKnown RBP10.26□□□□□ -0.77
CNOT4-201ENST00000315544 VAMP4O75379 141 aa10.25□□□□□ -0.77
CNOT4-201ENST00000315544 CCDC146Q8IYE0 955 aa10.25□□□□□ -0.77
CNOT4-201ENST00000315544 SENP3-EIF4A1A0A087X0R7 540 aa10.25□□□□□ -0.77
CNOT4-201ENST00000315544 NUCB1Q02818 461 aa10.25□□□□□ -0.77
CNOT4-201ENST00000315544 ARHGAP45Q92619 1136 aa10.25□□□□□ -0.77
CNOT4-201ENST00000315544 PHACTR3Q96KR7 559 aa10.25□□□□□ -0.77
CNOT4-201ENST00000315544 TTC21AQ8NDW8 1320 aa10.24□□□□□ -0.77
CNOT4-201ENST00000315544 ALDH1L2Q3SY69 923 aa10.24□□□□□ -0.77
CNOT4-201ENST00000315544 MRPL50Q8N5N7 158 aaKnown RBP10.24□□□□□ -0.77
CNOT4-201ENST00000315544 ZNF326Q5BKZ1 582 aaKnown RBP10.24□□□□□ -0.77
CNOT4-201ENST00000315544 KNSTRNQ9Y448 316 aa10.24□□□□□ -0.77
CNOT4-201ENST00000315544 MYH7P12883 1935 aa10.23□□□□□ -0.77
CNOT4-201ENST00000315544 TNS2Q63HR2 1409 aa10.23□□□□□ -0.77
CNOT4-201ENST00000315544 NPHP3Q7Z494 1330 aa10.22□□□□□ -0.77
CNOT4-201ENST00000315544 CD2BP2O95400 341 aaKnown RBP10.22□□□□□ -0.77
CNOT4-201ENST00000315544 PANK1Q8TE04 598 aa10.22□□□□□ -0.77
CNOT4-201ENST00000315544 NFKBIBQ15653 356 aa10.22□□□□□ -0.77
CNOT4-201ENST00000315544 AKAP11Q9UKA4 1901 aa10.22□□□□□ -0.77
CNOT4-201ENST00000315544 EVC2Q86UK5 1308 aa10.22□□□□□ -0.77
CNOT4-201ENST00000315544 SSH1Q8WYL5 1049 aa10.21□□□□□ -0.77
CNOT4-201ENST00000315544 PROSER2Q86WR7 435 aaPredicted RBP10.21□□□□□ -0.77
CNOT4-201ENST00000315544 SNX21Q969T3 373 aa10.21□□□□□ -0.77
CNOT4-201ENST00000315544 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
CNOT4-201ENST00000315544 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
CNOT4-201ENST00000315544 MYO5AQ9Y4I1 1855 aaKnown RBP10.2□□□□□ -0.78
CNOT4-201ENST00000315544 WAPLQ7Z5K2 1190 aa10.19□□□□□ -0.78
CNOT4-201ENST00000315544 GSPT1P15170 499 aaKnown RBP10.19□□□□□ -0.78
CNOT4-201ENST00000315544 ARFGEF1Q9Y6D6 1849 aa10.19□□□□□ -0.78
CNOT4-201ENST00000315544 LRRC37AA6NMS7 1700 aa10.19□□□□□ -0.78
CNOT4-201ENST00000315544 CABP2Q9NPB3 220 aa10.18□□□□□ -0.78
CNOT4-201ENST00000315544 KCPQ6ZWJ8 1503 aa10.18□□□□□ -0.78
CNOT4-201ENST00000315544 FCHSD2O94868 740 aa10.18□□□□□ -0.78
CNOT4-201ENST00000315544 IGSF1Q8N6C5 1336 aa10.18□□□□□ -0.78
CNOT4-201ENST00000315544 MAPK8IP3Q9UPT6 1336 aa10.18□□□□□ -0.78
CNOT4-201ENST00000315544 INTS3Q68E01 1043 aaKnown RBP10.17□□□□□ -0.78
CNOT4-201ENST00000315544 TSPYL6Q8N831 410 aa10.17□□□□□ -0.78
CNOT4-201ENST00000315544 TRAK1Q9UPV9 953 aa10.17□□□□□ -0.78
CNOT4-201ENST00000315544 ZNF428Q96B54 188 aa10.17□□□□□ -0.78
CNOT4-201ENST00000315544 PDZRN3Q9UPQ7 1066 aa10.17□□□□□ -0.78
CNOT4-201ENST00000315544 EP400Q96L91 3159 aa10.16□□□□□ -0.78
CNOT4-201ENST00000315544 ORAI2Q96SN7 254 aa10.16□□□□□ -0.78
CNOT4-201ENST00000315544 OSBPL3Q9H4L5 887 aa10.16□□□□□ -0.78
CNOT4-201ENST00000315544 CHL1O00533 1208 aa10.16□□□□□ -0.78
CNOT4-201ENST00000315544 UBAP1LF5GYI3 381 aa10.16□□□□□ -0.78
CNOT4-201ENST00000315544 BARGINQ6ZT62 677 aa10.15□□□□□ -0.78
CNOT4-201ENST00000315544 LRRC59Q96AG4 307 aaKnown RBP10.15□□□□□ -0.78
CNOT4-201ENST00000315544 MYH3P11055 1940 aa10.15□□□□□ -0.78
CNOT4-201ENST00000315544 LRP10Q7Z4F1 713 aa10.15□□□□□ -0.79
CNOT4-201ENST00000315544 VPS72Q15906 364 aa10.14□□□□□ -0.79
CNOT4-201ENST00000315544 ATF7IPQ6VMQ6 1270 aa10.14□□□□□ -0.79
CNOT4-201ENST00000315544 CDK19Q9BWU1 502 aa10.14□□□□□ -0.79
CNOT4-201ENST00000315544 LTBP1Q14766 1721 aa10.14□□□□□ -0.79
CNOT4-201ENST00000315544 SPATA31A5Q5VU36 1347 aa10.14□□□□□ -0.79
CNOT4-201ENST00000315544 SPATA31A7Q8IWB4 1347 aa10.14□□□□□ -0.79
CNOT4-201ENST00000315544 IL27Q8NEV9 243 aa10.14□□□□□ -0.79
CNOT4-201ENST00000315544 COL4A1P02462 1669 aa10.13□□□□□ -0.79
CNOT4-201ENST00000315544 ILDR2Q71H61 639 aa10.13□□□□□ -0.79
CNOT4-201ENST00000315544 SNRKQ9NRH2 765 aa10.13□□□□□ -0.79
CNOT4-201ENST00000315544 IFT57Q9NWB7 429 aa10.13□□□□□ -0.79
CNOT4-201ENST00000315544 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.13□□□□□ -0.79
CNOT4-201ENST00000315544 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
CNOT4-201ENST00000315544 ZDHHC9Q9Y397 364 aa10.13□□□□□ -0.79
CNOT4-201ENST00000315544 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
CNOT4-201ENST00000315544 NUDT16Q96DE0 195 aaKnown RBP10.13□□□□□ -0.79
CNOT4-201ENST00000315544 PHF8Q9UPP1 1060 aa10.13□□□□□ -0.79
CNOT4-201ENST00000315544 TSR2Q969E8 191 aaKnown RBP10.12□□□□□ -0.79
CNOT4-201ENST00000315544 BMP2KLQ5H9B9 411 aa10.12□□□□□ -0.79
CNOT4-201ENST00000315544 TMEM57Q8N5G2 664 aa10.12□□□□□ -0.79
CNOT4-201ENST00000315544 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
CNOT4-201ENST00000315544 MBIPQ9NS73 344 aa10.12□□□□□ -0.79
CNOT4-201ENST00000315544 USP42Q9H9J4 1324 aaKnown RBP10.11□□□□□ -0.79
CNOT4-201ENST00000315544 CHD4Q14839 1912 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms