RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 CDCA7Q9BWT1 371 aaPredicted RBP20.85■□□□□ 0.93
TUBA3E-201ENST00000312988 MEGF6O75095 1541 aa20.85■□□□□ 0.93
TUBA3E-201ENST00000312988 MAPK8IP3Q9UPT6 1336 aa20.85■□□□□ 0.93
TUBA3E-201ENST00000312988 PARP4Q9UKK3 1724 aaKnown RBP20.83■□□□□ 0.93
TUBA3E-201ENST00000312988 WNK3Q9BYP7 1800 aa20.83■□□□□ 0.92
TUBA3E-201ENST00000312988 DISP2A7MBM2 1401 aa20.83■□□□□ 0.92
TUBA3E-201ENST00000312988 OVOS2A0A0G2JMS6 1433 aa20.82■□□□□ 0.92
TUBA3E-201ENST00000312988 PLEKHO1Q53GL0 409 aaPredicted RBP20.82■□□□□ 0.92
TUBA3E-201ENST00000312988 RUNDC1Q96C34 613 aa20.81■□□□□ 0.92
TUBA3E-201ENST00000312988 SPG7Q9UQ90 795 aa20.81■□□□□ 0.92
TUBA3E-201ENST00000312988 EXOC5O00471 708 aa20.8■□□□□ 0.92
TUBA3E-201ENST00000312988 DDB1Q16531 1140 aa20.8■□□□□ 0.92
TUBA3E-201ENST00000312988 AMOTQ4VCS5 1084 aa20.8■□□□□ 0.92
TUBA3E-201ENST00000312988 ZCRB1Q8TBF4 217 aaKnown RBP20.8■□□□□ 0.92
TUBA3E-201ENST00000312988 PHACTR3Q96KR7 559 aa20.8■□□□□ 0.92
TUBA3E-201ENST00000312988 PLEKHF1Q96S99 279 aa20.8■□□□□ 0.92
TUBA3E-201ENST00000312988 SEPT12Q8IYM1 358 aa20.79■□□□□ 0.92
TUBA3E-201ENST00000312988 ZNF530Q6P9A1 599 aaPredicted RBP20.78■□□□□ 0.92
TUBA3E-201ENST00000312988 THSD7AQ9UPZ6 1657 aa20.77■□□□□ 0.92
TUBA3E-201ENST00000312988 PLEKHG2Q9H7P9 1386 aa20.77■□□□□ 0.92
TUBA3E-201ENST00000312988 ONECUT3O60422 494 aaPredicted RBP20.77■□□□□ 0.92
TUBA3E-201ENST00000312988 MTHFSDQ2M296 383 aaKnown RBP20.77■□□□□ 0.92
TUBA3E-201ENST00000312988 GAS2L2Q8NHY3 880 aa20.77■□□□□ 0.92
TUBA3E-201ENST00000312988 DDX54Q8TDD1 881 aaKnown RBP20.77■□□□□ 0.92
TUBA3E-201ENST00000312988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.77■□□□□ 0.92
TUBA3E-201ENST00000312988 TNS2Q63HR2 1409 aa20.77■□□□□ 0.91
TUBA3E-201ENST00000312988 LRRC37A3O60309 1634 aa20.76■□□□□ 0.91
TUBA3E-201ENST00000312988 PDE3BQ13370 1112 aa20.76■□□□□ 0.91
TUBA3E-201ENST00000312988 PCDH11XQ9BZA7 1347 aa20.76■□□□□ 0.91
TUBA3E-201ENST00000312988 PCDH11YQ9BZA8 1340 aa20.76■□□□□ 0.91
TUBA3E-201ENST00000312988 C1orf141Q5JVX7 400 aa20.75■□□□□ 0.91
TUBA3E-201ENST00000312988 PKD1L3Q7Z443 1732 aa20.75■□□□□ 0.91
TUBA3E-201ENST00000312988 SENP3-EIF4A1A0A087X0R7 540 aa20.74■□□□□ 0.91
TUBA3E-201ENST00000312988 APAF1O14727 1248 aa20.74■□□□□ 0.91
TUBA3E-201ENST00000312988 NEUROD2Q15784 382 aa20.73■□□□□ 0.91
TUBA3E-201ENST00000312988 NFE2L2Q16236 605 aa20.73■□□□□ 0.91
TUBA3E-201ENST00000312988 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
TUBA3E-201ENST00000312988 RGS12O14924 1447 aa20.73■□□□□ 0.91
TUBA3E-201ENST00000312988 IFNL2Q8IZJ0 200 aa20.72■□□□□ 0.91
TUBA3E-201ENST00000312988 CYP27B1O15528 508 aa20.71■□□□□ 0.91
TUBA3E-201ENST00000312988 PHKG2P15735 406 aa20.71■□□□□ 0.91
TUBA3E-201ENST00000312988 TMPOP42166 694 aaKnown RBP20.71■□□□□ 0.91
TUBA3E-201ENST00000312988 RIPK4P57078 832 aa20.7■□□□□ 0.9
TUBA3E-201ENST00000312988 AKAP4Q5JQC9 854 aa20.7■□□□□ 0.9
TUBA3E-201ENST00000312988 SHANK3Q9BYB0 1731 aa20.7■□□□□ 0.9
TUBA3E-201ENST00000312988 KRT27Q7Z3Y8 459 aa20.69■□□□□ 0.9
TUBA3E-201ENST00000312988 MAP3K5Q99683 1374 aa20.69■□□□□ 0.9
TUBA3E-201ENST00000312988 GNAT3A8MTJ3 354 aa20.68■□□□□ 0.9
TUBA3E-201ENST00000312988 MARCH10Q8NA82 808 aaPredicted RBP20.68■□□□□ 0.9
TUBA3E-201ENST00000312988 RTF1Q92541 710 aaKnown RBP20.68■□□□□ 0.9
TUBA3E-201ENST00000312988 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
TUBA3E-201ENST00000312988 HSP90AB1P08238 724 aaKnown RBP20.68■□□□□ 0.9
TUBA3E-201ENST00000312988 BRWD3Q6RI45 1802 aa20.67■□□□□ 0.9
TUBA3E-201ENST00000312988 LMOD3Q0VAK6 560 aa20.67■□□□□ 0.9
TUBA3E-201ENST00000312988 MPRIPQ6WCQ1 1025 aa20.67■□□□□ 0.9
TUBA3E-201ENST00000312988 FAM182BQ5T319 152 aa20.66■□□□□ 0.9
TUBA3E-201ENST00000312988 HNRNPUQ00839 825 aaKnown RBP eCLIP20.65■□□□□ 0.9
TUBA3E-201ENST00000312988 DLG5Q8TDM6 1919 aa20.65■□□□□ 0.9
TUBA3E-201ENST00000312988 DCAF5Q96JK2 942 aa20.64■□□□□ 0.9
TUBA3E-201ENST00000312988 MCM10Q7L590 875 aa20.63■□□□□ 0.89
TUBA3E-201ENST00000312988 HTATSF1O43719 755 aaKnown RBP20.63■□□□□ 0.89
TUBA3E-201ENST00000312988 DCTN1Q14203 1278 aa20.63■□□□□ 0.89
TUBA3E-201ENST00000312988 NKX1-1Q15270 411 aaPredicted RBP20.63■□□□□ 0.89
TUBA3E-201ENST00000312988 RNMTO43148 476 aaKnown RBP20.62■□□□□ 0.89
TUBA3E-201ENST00000312988 LGR6Q9HBX8 967 aa20.62■□□□□ 0.89
TUBA3E-201ENST00000312988 KAT6BQ8WYB5 2073 aa20.62■□□□□ 0.89
TUBA3E-201ENST00000312988 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
TUBA3E-201ENST00000312988 NGEFQ8N5V2 710 aa20.61■□□□□ 0.89
TUBA3E-201ENST00000312988 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
TUBA3E-201ENST00000312988 TRIM35Q9UPQ4 493 aa20.61■□□□□ 0.89
TUBA3E-201ENST00000312988 IL17REQ8NFR9 667 aa20.6■□□□□ 0.89
TUBA3E-201ENST00000312988 ACSBG1Q96GR2 724 aa20.6■□□□□ 0.89
TUBA3E-201ENST00000312988 THUMPD2Q9BTF0 503 aaKnown RBP20.6■□□□□ 0.89
TUBA3E-201ENST00000312988 FAM196AQ6ZSG2 479 aa20.59■□□□□ 0.89
TUBA3E-201ENST00000312988 SYTL4Q96C24 671 aaPredicted RBP20.59■□□□□ 0.89
TUBA3E-201ENST00000312988 CABP4P57796 275 aa20.58■□□□□ 0.89
TUBA3E-201ENST00000312988 TEFQ10587 303 aa20.58■□□□□ 0.89
TUBA3E-201ENST00000312988 CCDC27Q2M243 656 aa20.58■□□□□ 0.89
TUBA3E-201ENST00000312988 WWC1Q8IX03 1113 aa20.58■□□□□ 0.88
TUBA3E-201ENST00000312988 SCN11AQ9UI33 1791 aa20.58■□□□□ 0.88
TUBA3E-201ENST00000312988 ERVV-2B6SEH9 535 aa20.57■□□□□ 0.88
TUBA3E-201ENST00000312988 PRIM1P49642 420 aaKnown RBP20.57■□□□□ 0.88
TUBA3E-201ENST00000312988 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
TUBA3E-201ENST00000312988 VIRMAQ69YN4 1812 aaKnown RBP20.57■□□□□ 0.88
TUBA3E-201ENST00000312988 DOT1LQ8TEK3 1739 aa20.57■□□□□ 0.88
TUBA3E-201ENST00000312988 CALD1Q05682 793 aaKnown RBP20.56■□□□□ 0.88
TUBA3E-201ENST00000312988 TMOD3Q9NYL9 352 aa20.56■□□□□ 0.88
TUBA3E-201ENST00000312988 TOGARAM1Q9Y4F4 1720 aa20.55■□□□□ 0.88
TUBA3E-201ENST00000312988 CEMIPQ8WUJ3 1361 aa20.55■□□□□ 0.88
TUBA3E-201ENST00000312988 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
TUBA3E-201ENST00000312988 BCL9O00512 1426 aa20.55■□□□□ 0.88
TUBA3E-201ENST00000312988 NFATC2IPQ8NCF5 419 aa20.54■□□□□ 0.88
TUBA3E-201ENST00000312988 LAS1LQ9Y4W2 734 aaKnown RBP20.54■□□□□ 0.88
TUBA3E-201ENST00000312988 ADAMTS7Q9UKP4 1686 aa20.54■□□□□ 0.88
TUBA3E-201ENST00000312988 KCNQ2O43526 872 aa20.53■□□□□ 0.88
TUBA3E-201ENST00000312988 TAF7Q15545 349 aaPredicted RBP20.52■□□□□ 0.87
TUBA3E-201ENST00000312988 MRC1P22897 1456 aa20.51■□□□□ 0.87
TUBA3E-201ENST00000312988 TRIM37O94972 964 aa20.51■□□□□ 0.87
TUBA3E-201ENST00000312988 WDR63Q8IWG1 891 aa20.51■□□□□ 0.87
TUBA3E-201ENST00000312988 PIGBQ92521 554 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms