RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 HMOX1P09601 288 aa23.44■■□□□ 1.34
SWSAP1-201ENST00000312423 ZCRB1Q8TBF4 217 aaKnown RBP23.44■■□□□ 1.34
SWSAP1-201ENST00000312423 DDX54Q8TDD1 881 aaKnown RBP23.43■■□□□ 1.34
SWSAP1-201ENST00000312423 MARCH10Q8NA82 808 aaPredicted RBP23.41■■□□□ 1.34
SWSAP1-201ENST00000312423 SHANK3Q9BYB0 1731 aa23.4■■□□□ 1.34
SWSAP1-201ENST00000312423 KDRP35968 1356 aa23.4■■□□□ 1.34
SWSAP1-201ENST00000312423 PKD1L3Q7Z443 1732 aa23.39■■□□□ 1.34
SWSAP1-201ENST00000312423 U2AF1L5P0DN76 240 aaPredicted RBP23.39■■□□□ 1.34
SWSAP1-201ENST00000312423 U2AF1Q01081 240 aaKnown RBP eCLIP23.39■■□□□ 1.34
SWSAP1-201ENST00000312423 FAM196AQ6ZSG2 479 aa23.39■■□□□ 1.34
SWSAP1-201ENST00000312423 SPG7Q9UQ90 795 aa23.39■■□□□ 1.34
SWSAP1-201ENST00000312423 PCDH11XQ9BZA7 1347 aa23.37■■□□□ 1.33
SWSAP1-201ENST00000312423 PCDH11YQ9BZA8 1340 aa23.37■■□□□ 1.33
SWSAP1-201ENST00000312423 SOCS7O14512 581 aa23.36■■□□□ 1.33
SWSAP1-201ENST00000312423 EP400Q96L91 3159 aa23.35■■□□□ 1.33
SWSAP1-201ENST00000312423 PLEKHO1Q53GL0 409 aaPredicted RBP23.35■■□□□ 1.33
SWSAP1-201ENST00000312423 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.34■■□□□ 1.33
SWSAP1-201ENST00000312423 PLEKHG2Q9H7P9 1386 aa23.33■■□□□ 1.33
SWSAP1-201ENST00000312423 AMOTQ4VCS5 1084 aa23.33■■□□□ 1.33
SWSAP1-201ENST00000312423 UPF1Q92900 1129 aaKnown RBP eCLIP23.33■■□□□ 1.33
SWSAP1-201ENST00000312423 TRIM37O94972 964 aa23.32■■□□□ 1.32
SWSAP1-201ENST00000312423 PRKAR2BP31323 418 aa23.32■■□□□ 1.32
SWSAP1-201ENST00000312423 ZNF530Q6P9A1 599 aaPredicted RBP23.32■■□□□ 1.32
SWSAP1-201ENST00000312423 SBF2Q86WG5 1849 aa23.31■■□□□ 1.32
SWSAP1-201ENST00000312423 CYP27B1O15528 508 aa23.31■■□□□ 1.32
SWSAP1-201ENST00000312423 SF3B2Q13435 895 aaKnown RBP23.31■■□□□ 1.32
SWSAP1-201ENST00000312423 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
SWSAP1-201ENST00000312423 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
SWSAP1-201ENST00000312423 WDR43Q15061 677 aaKnown RBP eCLIP23.3■■□□□ 1.32
SWSAP1-201ENST00000312423 ACSBG1Q96GR2 724 aa23.3■■□□□ 1.32
SWSAP1-201ENST00000312423 IFNL2Q8IZJ0 200 aa23.29■■□□□ 1.32
SWSAP1-201ENST00000312423 DOT1LQ8TEK3 1739 aa23.29■■□□□ 1.32
SWSAP1-201ENST00000312423 BCL9O00512 1426 aa23.29■■□□□ 1.32
SWSAP1-201ENST00000312423 FCHSD2O94868 740 aa23.28■■□□□ 1.32
SWSAP1-201ENST00000312423 C1orf141Q5JVX7 400 aa23.28■■□□□ 1.32
SWSAP1-201ENST00000312423 DIEXFQ68CQ4 756 aaKnown RBP23.28■■□□□ 1.32
SWSAP1-201ENST00000312423 PHKG2P15735 406 aa23.28■■□□□ 1.32
SWSAP1-201ENST00000312423 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
SWSAP1-201ENST00000312423 TNS1Q9HBL0 1735 aaKnown RBP23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 NEFMP07197 916 aa23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 CCDC184Q52MB2 194 aa23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 CCDC125Q86Z20 511 aa23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 SYTL4Q96C24 671 aaPredicted RBP23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 NHSQ6T4R5 1651 aa23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 MTHFSDQ2M296 383 aaKnown RBP23.25■■□□□ 1.31
SWSAP1-201ENST00000312423 PNNQ9H307 717 aaKnown RBP23.24■■□□□ 1.31
SWSAP1-201ENST00000312423 KCNQ2O43526 872 aa23.23■■□□□ 1.31
SWSAP1-201ENST00000312423 PHACTR3Q96KR7 559 aa23.23■■□□□ 1.31
SWSAP1-201ENST00000312423 BCL11BQ9C0K0 894 aaPredicted RBP23.23■■□□□ 1.31
SWSAP1-201ENST00000312423 HSP90AB1P08238 724 aaKnown RBP23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 TOGARAM1Q9Y4F4 1720 aa23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 APBA3O96018 575 aa23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 PRIM1P49642 420 aaKnown RBP23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 NKX1-1Q15270 411 aaPredicted RBP23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 PTF1AQ7RTS3 328 aa23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
SWSAP1-201ENST00000312423 BAG6P46379 1132 aa23.2■■□□□ 1.3
SWSAP1-201ENST00000312423 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
SWSAP1-201ENST00000312423 MPRIPQ6WCQ1 1025 aa23.19■■□□□ 1.3
SWSAP1-201ENST00000312423 DCAF5Q96JK2 942 aa23.19■■□□□ 1.3
SWSAP1-201ENST00000312423 BTAF1O14981 1849 aa23.19■■□□□ 1.3
SWSAP1-201ENST00000312423 DEFB132Q7Z7B7 95 aa23.19■■□□□ 1.3
SWSAP1-201ENST00000312423 ITGB4P16144 1822 aa23.18■■□□□ 1.3
SWSAP1-201ENST00000312423 CCDC146Q8IYE0 955 aa23.18■■□□□ 1.3
SWSAP1-201ENST00000312423 PLEKHF1Q96S99 279 aa23.18■■□□□ 1.3
SWSAP1-201ENST00000312423 MAP3K5Q99683 1374 aa23.17■■□□□ 1.3
SWSAP1-201ENST00000312423 KDM6AO15550 1401 aaPredicted RBP23.17■■□□□ 1.3
SWSAP1-201ENST00000312423 VIRMAQ69YN4 1812 aaKnown RBP23.16■■□□□ 1.3
SWSAP1-201ENST00000312423 SCN11AQ9UI33 1791 aa23.16■■□□□ 1.3
SWSAP1-201ENST00000312423 GNAT3A8MTJ3 354 aa23.16■■□□□ 1.3
SWSAP1-201ENST00000312423 EN1Q05925 392 aaPredicted RBP23.16■■□□□ 1.3
SWSAP1-201ENST00000312423 TMOD3Q9NYL9 352 aa23.15■■□□□ 1.3
SWSAP1-201ENST00000312423 CABP4P57796 275 aa23.13■■□□□ 1.29
SWSAP1-201ENST00000312423 ERVV-2B6SEH9 535 aa23.13■■□□□ 1.29
SWSAP1-201ENST00000312423 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
SWSAP1-201ENST00000312423 RUNDC1Q96C34 613 aa23.13■■□□□ 1.29
SWSAP1-201ENST00000312423 LGR6Q9HBX8 967 aa23.13■■□□□ 1.29
SWSAP1-201ENST00000312423 RNMTO43148 476 aaKnown RBP23.12■■□□□ 1.29
SWSAP1-201ENST00000312423 RTF1Q92541 710 aaKnown RBP23.12■■□□□ 1.29
SWSAP1-201ENST00000312423 DLG5Q8TDM6 1919 aa23.12■■□□□ 1.29
SWSAP1-201ENST00000312423 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
SWSAP1-201ENST00000312423 EZH2Q15910 746 aaKnown RBP23.1■■□□□ 1.29
SWSAP1-201ENST00000312423 PIGBQ92521 554 aa23.1■■□□□ 1.29
SWSAP1-201ENST00000312423 FAM9BQ8IZU0 186 aa23.09■■□□□ 1.29
SWSAP1-201ENST00000312423 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
SWSAP1-201ENST00000312423 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
SWSAP1-201ENST00000312423 PLSCR1O15162 318 aa23.09■■□□□ 1.29
SWSAP1-201ENST00000312423 MIER1Q8N108 512 aa23.09■■□□□ 1.29
SWSAP1-201ENST00000312423 ADAMTS7Q9UKP4 1686 aa23.08■■□□□ 1.29
SWSAP1-201ENST00000312423 NFATC2IPQ8NCF5 419 aa23.08■■□□□ 1.29
SWSAP1-201ENST00000312423 CAMKK2Q96RR4 588 aa23.08■■□□□ 1.29
SWSAP1-201ENST00000312423 NEUROD2Q15784 382 aa23.07■■□□□ 1.28
SWSAP1-201ENST00000312423 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
SWSAP1-201ENST00000312423 CCER2I3L3R5 266 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 TEFQ10587 303 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 MCM10Q7L590 875 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 SLC52A2Q9HAB3 445 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms