RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 USP26Q9BXU7 913 aa19.56■□□□□ 0.72
SOX30-202ENST00000311371 HNRNPH2P55795 449 aaKnown RBP19.55■□□□□ 0.72
SOX30-202ENST00000311371 SYNMO15061 1565 aa19.55■□□□□ 0.72
SOX30-202ENST00000311371 CARD14Q9BXL6 1004 aa19.54■□□□□ 0.72
SOX30-202ENST00000311371 TSPYL1Q9H0U9 437 aa19.54■□□□□ 0.72
SOX30-202ENST00000311371 GSPT1P15170 499 aaKnown RBP19.54■□□□□ 0.72
SOX30-202ENST00000311371 AP5Z1O43299 807 aa19.53■□□□□ 0.72
SOX30-202ENST00000311371 ANKRD36BQ8N2N9 1353 aa19.53■□□□□ 0.72
SOX30-202ENST00000311371 SMTNL1A8MU46 457 aa19.53■□□□□ 0.72
SOX30-202ENST00000311371 U2SURPO15042 1029 aaKnown RBP19.53■□□□□ 0.72
SOX30-202ENST00000311371 SYCP1Q15431 976 aa19.53■□□□□ 0.72
SOX30-202ENST00000311371 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.53■□□□□ 0.72
SOX30-202ENST00000311371 V9GYY5 206 aaPredicted RBP19.53■□□□□ 0.72
SOX30-202ENST00000311371 KIF3BO15066 747 aa19.53■□□□□ 0.72
SOX30-202ENST00000311371 NOL8Q76FK4 1167 aaKnown RBP19.53■□□□□ 0.72
SOX30-202ENST00000311371 USP48Q86UV5 1035 aa19.53■□□□□ 0.72
SOX30-202ENST00000311371 CCDC112Q8NEF3 446 aa19.53■□□□□ 0.72
SOX30-202ENST00000311371 POLR3AO14802 1390 aaPredicted RBP19.52■□□□□ 0.72
SOX30-202ENST00000311371 EIF2AK4Q9P2K8 1649 aaKnown RBP19.52■□□□□ 0.71
SOX30-202ENST00000311371 KMT5BQ4FZB7 885 aa19.52■□□□□ 0.71
SOX30-202ENST00000311371 ZNF592Q92610 1267 aa19.52■□□□□ 0.71
SOX30-202ENST00000311371 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
SOX30-202ENST00000311371 BRD1O95696 1058 aa19.51■□□□□ 0.71
SOX30-202ENST00000311371 TNNT1P13805 278 aa19.51■□□□□ 0.71
SOX30-202ENST00000311371 PTGS1P23219 599 aa19.51■□□□□ 0.71
SOX30-202ENST00000311371 TMX1Q9H3N1 280 aa19.51■□□□□ 0.71
SOX30-202ENST00000311371 IFT57Q9NWB7 429 aa19.51■□□□□ 0.71
SOX30-202ENST00000311371 GCC1Q96CN9 775 aa19.51■□□□□ 0.71
SOX30-202ENST00000311371 RAD51AP2Q09MP3 1159 aa19.5■□□□□ 0.71
SOX30-202ENST00000311371 RSPH14Q9UHP6 348 aa19.5■□□□□ 0.71
SOX30-202ENST00000311371 IQGAP3Q86VI3 1631 aa19.49■□□□□ 0.71
SOX30-202ENST00000311371 MORC1Q86VD1 984 aa19.49■□□□□ 0.71
SOX30-202ENST00000311371 GOLGA6L6A8MZA4 724 aa19.49■□□□□ 0.71
SOX30-202ENST00000311371 CCDC27Q2M243 656 aa19.49■□□□□ 0.71
SOX30-202ENST00000311371 CCDC183Q5T5S1 534 aa19.49■□□□□ 0.71
SOX30-202ENST00000311371 MROH1Q8NDA8 1641 aa19.49■□□□□ 0.71
SOX30-202ENST00000311371 IQSEC2Q5JU85 1478 aa19.49■□□□□ 0.71
SOX30-202ENST00000311371 KANK1Q14678 1352 aa19.48■□□□□ 0.71
SOX30-202ENST00000311371 PPIP5K1Q6PFW1 1433 aa19.48■□□□□ 0.71
SOX30-202ENST00000311371 TPM3P06753 285 aa19.48■□□□□ 0.71
SOX30-202ENST00000311371 SRPK2P78362 688 aaKnown RBP19.48■□□□□ 0.71
SOX30-202ENST00000311371 MLECQ14165 292 aa19.48■□□□□ 0.71
SOX30-202ENST00000311371 ZNF397Q8NF99 534 aaPredicted RBP19.48■□□□□ 0.71
SOX30-202ENST00000311371 TMX3Q96JJ7 454 aa19.48■□□□□ 0.71
SOX30-202ENST00000311371 RTF1Q92541 710 aaKnown RBP19.48■□□□□ 0.71
SOX30-202ENST00000311371 NOL10Q9BSC4 688 aaKnown RBP19.48■□□□□ 0.71
SOX30-202ENST00000311371 SIGLEC1Q9BZZ2 1709 aa19.48■□□□□ 0.71
SOX30-202ENST00000311371 PLA2R1Q13018 1463 aa19.47■□□□□ 0.71
SOX30-202ENST00000311371 IPO8O15397 1037 aaKnown RBP19.47■□□□□ 0.71
SOX30-202ENST00000311371 LRMPQ12912 555 aa19.47■□□□□ 0.71
SOX30-202ENST00000311371 NEK4P51957 841 aa19.46■□□□□ 0.71
SOX30-202ENST00000311371 GIMAP6Q6P9H5 292 aa19.46■□□□□ 0.71
SOX30-202ENST00000311371 CT47B1P0C2W7 299 aaPredicted RBP19.45■□□□□ 0.7
SOX30-202ENST00000311371 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
SOX30-202ENST00000311371 CYP2C19P33261 490 aa19.45■□□□□ 0.7
SOX30-202ENST00000311371 RBM6P78332 1123 aaKnown RBP19.45■□□□□ 0.7
SOX30-202ENST00000311371 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
SOX30-202ENST00000311371 INTS3Q68E01 1043 aaKnown RBP19.45■□□□□ 0.7
SOX30-202ENST00000311371 NPHP1O15259 732 aa19.45■□□□□ 0.7
SOX30-202ENST00000311371 MX1P20591 662 aa19.45■□□□□ 0.7
SOX30-202ENST00000311371 FBXO38Q6PIJ6 1188 aa19.45■□□□□ 0.7
SOX30-202ENST00000311371 RNF17Q9BXT8 1623 aaKnown RBP19.44■□□□□ 0.7
SOX30-202ENST00000311371 SOX12O15370 315 aa19.44■□□□□ 0.7
SOX30-202ENST00000311371 PLEKHM2Q8IWE5 1019 aa19.44■□□□□ 0.7
SOX30-202ENST00000311371 C16orf71Q8IYS4 520 aaPredicted RBP19.44■□□□□ 0.7
SOX30-202ENST00000311371 GTF3C6Q969F1 213 aa19.44■□□□□ 0.7
SOX30-202ENST00000311371 EFCC1Q9HA90 598 aa19.44■□□□□ 0.7
SOX30-202ENST00000311371 PAXBP1Q9Y5B6 917 aa19.44■□□□□ 0.7
SOX30-202ENST00000311371 CEP152O94986 1710 aa19.44■□□□□ 0.7
SOX30-202ENST00000311371 ARHGEF40Q8TER5 1519 aa19.43■□□□□ 0.7
SOX30-202ENST00000311371 ATP10AO60312 1499 aa19.43■□□□□ 0.7
SOX30-202ENST00000311371 LOC102724159A0A0B4J2E5 919 aa19.43■□□□□ 0.7
SOX30-202ENST00000311371 PWP2Q15269 919 aaKnown RBP19.43■□□□□ 0.7
SOX30-202ENST00000311371 TPD52L1Q16890 204 aaPredicted RBP19.43■□□□□ 0.7
SOX30-202ENST00000311371 GGT6Q6P531 493 aa19.43■□□□□ 0.7
SOX30-202ENST00000311371 CCDC186Q7Z3E2 898 aa19.43■□□□□ 0.7
SOX30-202ENST00000311371 SIRT2Q8IXJ6 389 aa19.43■□□□□ 0.7
SOX30-202ENST00000311371 DHX37Q8IY37 1157 aaKnown RBP19.43■□□□□ 0.7
SOX30-202ENST00000311371 DRC7Q8IY82 874 aa19.43■□□□□ 0.7
SOX30-202ENST00000311371 ZNF215Q9UL58 517 aaPredicted RBP19.43■□□□□ 0.7
SOX30-202ENST00000311371 MTHFSP49914 203 aa19.42■□□□□ 0.7
SOX30-202ENST00000311371 MYOM1P52179 1685 aa19.42■□□□□ 0.7
SOX30-202ENST00000311371 ELF2Q15723 593 aa19.42■□□□□ 0.7
SOX30-202ENST00000311371 HDAC5Q9UQL6 1122 aa19.42■□□□□ 0.7
SOX30-202ENST00000311371 TTC22Q5TAA0 569 aa19.41■□□□□ 0.7
SOX30-202ENST00000311371 VWDEQ8N2E2 1590 aa19.41■□□□□ 0.7
SOX30-202ENST00000311371 FAM53CQ9NYF3 392 aa19.41■□□□□ 0.7
SOX30-202ENST00000311371 CNPY2Q9Y2B0 182 aa19.41■□□□□ 0.7
SOX30-202ENST00000311371 ZBTB7BO15156 539 aaPredicted RBP19.4■□□□□ 0.7
SOX30-202ENST00000311371 NEK11Q8NG66 645 aa19.4■□□□□ 0.7
SOX30-202ENST00000311371 RASSF4Q9H2L5 321 aa19.4■□□□□ 0.7
SOX30-202ENST00000311371 CFAP65Q6ZU64 1925 aaKnown RBP19.4■□□□□ 0.7
SOX30-202ENST00000311371 BRD2P25440 801 aaKnown RBP19.4■□□□□ 0.7
SOX30-202ENST00000311371 SLC52A1Q9NWF4 448 aa19.4■□□□□ 0.7
SOX30-202ENST00000311371 RNF216Q9NWF9 866 aaPredicted RBP19.4■□□□□ 0.7
SOX30-202ENST00000311371 NRBP1Q9UHY1 535 aa19.4■□□□□ 0.7
SOX30-202ENST00000311371 GTF2A1P52655 376 aaPredicted RBP19.39■□□□□ 0.7
SOX30-202ENST00000311371 CASC1Q6TDU7 716 aa19.39■□□□□ 0.7
SOX30-202ENST00000311371 GEMIN8Q9NWZ8 242 aaKnown RBP19.39■□□□□ 0.7
SOX30-202ENST00000311371 SHPRHQ149N8 1683 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms