RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 LRRC7Q96NW7 1537 aa7.46□□□□□ -1.22
SEC22A-201ENST00000309934 CLUAP1Q96AJ1 413 aa7.46□□□□□ -1.22
SEC22A-201ENST00000309934 GPATCH3Q96I76 525 aa7.46□□□□□ -1.22
SEC22A-201ENST00000309934 RRS1Q15050 365 aaKnown RBP7.46□□□□□ -1.22
SEC22A-201ENST00000309934 TAF7Q15545 349 aaPredicted RBP7.46□□□□□ -1.22
SEC22A-201ENST00000309934 PLCD3Q8N3E9 789 aa7.46□□□□□ -1.22
SEC22A-201ENST00000309934 KIF1AQ12756 1690 aa7.46□□□□□ -1.22
SEC22A-201ENST00000309934 ZNF530Q6P9A1 599 aaPredicted RBP7.45□□□□□ -1.22
SEC22A-201ENST00000309934 LRRC59Q96AG4 307 aaKnown RBP7.45□□□□□ -1.22
SEC22A-201ENST00000309934 MEX3CQ5U5Q3 659 aaKnown RBP7.45□□□□□ -1.22
SEC22A-201ENST00000309934 TMEM94Q12767 1356 aa7.45□□□□□ -1.22
SEC22A-201ENST00000309934 RNF123Q5XPI4 1314 aa7.45□□□□□ -1.22
SEC22A-201ENST00000309934 RRP9O43818 475 aaKnown RBP7.45□□□□□ -1.22
SEC22A-201ENST00000309934 EXOSC9Q06265 439 aaKnown RBP7.45□□□□□ -1.22
SEC22A-201ENST00000309934 EIF4A2Q14240 407 aaKnown RBP7.45□□□□□ -1.22
SEC22A-201ENST00000309934 AKAP4Q5JQC9 854 aa7.45□□□□□ -1.22
SEC22A-201ENST00000309934 ATF7IPQ6VMQ6 1270 aa7.45□□□□□ -1.22
SEC22A-201ENST00000309934 GCC1Q96CN9 775 aa7.45□□□□□ -1.22
SEC22A-201ENST00000309934 TEX13AQ9BXU3 409 aaPredicted RBP7.45□□□□□ -1.22
SEC22A-201ENST00000309934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.45□□□□□ -1.223e-9■■■■□ 19.5
SEC22A-201ENST00000309934 KIF20BQ96Q89 1820 aa7.45□□□□□ -1.22
SEC22A-201ENST00000309934 KIAA0232Q92628 1395 aa7.45□□□□□ -1.22
SEC22A-201ENST00000309934 MYOM1P52179 1685 aa7.44□□□□□ -1.22
SEC22A-201ENST00000309934 PTMAP06454 111 aaKnown RBP7.44□□□□□ -1.22
SEC22A-201ENST00000309934 HOXC9P31274 260 aa7.44□□□□□ -1.22
SEC22A-201ENST00000309934 NCAPD2Q15021 1401 aa7.44□□□□□ -1.22
SEC22A-201ENST00000309934 FOXO3O43524 673 aa7.44□□□□□ -1.22
SEC22A-201ENST00000309934 MAP3K5Q99683 1374 aa7.44□□□□□ -1.22
SEC22A-201ENST00000309934 FANCIQ9NVI1 1328 aa7.44□□□□□ -1.22
SEC22A-201ENST00000309934 CRBNQ96SW2 442 aa7.44□□□□□ -1.22
SEC22A-201ENST00000309934 MAP3K19Q56UN5 1328 aa7.44□□□□□ -1.22
SEC22A-201ENST00000309934 B4GALNT3Q6L9W6 998 aa7.44□□□□□ -1.22
SEC22A-201ENST00000309934 ANKRD26Q9UPS8 1709 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 GCP02774 474 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 RARSP54136 660 aaKnown RBP7.43□□□□□ -1.22
SEC22A-201ENST00000309934 MVPQ14764 893 aaKnown RBP7.43□□□□□ -1.22
SEC22A-201ENST00000309934 IFNL2Q8IZJ0 200 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 ARID3AQ99856 593 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 PRR36Q9H6K5 1346 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 UBAP1LF5GYI3 381 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 ANKRD24Q8TF21 1146 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 MYO5BQ9ULV0 1848 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 MCCP23508 829 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 OVOS2A0A0J9YW53 1432 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 OVOS2Q6IE36 1432 aa7.43□□□□□ -1.22
SEC22A-201ENST00000309934 CDCA7LQ96GN5 454 aa7.42□□□□□ -1.22
SEC22A-201ENST00000309934 BRPF1P55201 1214 aaPredicted RBP7.42□□□□□ -1.22
SEC22A-201ENST00000309934 TOM1L2Q6ZVM7 507 aa7.42□□□□□ -1.22
SEC22A-201ENST00000309934 RPAP2Q8IXW5 612 aaPredicted RBP7.42□□□□□ -1.22
SEC22A-201ENST00000309934 TNNT3P45378 269 aaPredicted RBP7.42□□□□□ -1.22
SEC22A-201ENST00000309934 ILDR1Q86SU0 546 aaPredicted RBP7.42□□□□□ -1.22
SEC22A-201ENST00000309934 EXOC6Q8TAG9 804 aa7.42□□□□□ -1.22
SEC22A-201ENST00000309934 VIRMAQ69YN4 1812 aaKnown RBP7.42□□□□□ -1.22
SEC22A-201ENST00000309934 OS9Q13438 667 aaPredicted RBP7.41□□□□□ -1.22
SEC22A-201ENST00000309934 LRRFIP1Q32MZ4 808 aaKnown RBP7.41□□□□□ -1.22
SEC22A-201ENST00000309934 TRMT2AQ8IZ69 625 aaKnown RBP7.41□□□□□ -1.22
SEC22A-201ENST00000309934 IGSF1Q8N6C5 1336 aa7.41□□□□□ -1.22
SEC22A-201ENST00000309934 ZNF521Q96K83 1311 aa7.41□□□□□ -1.22
SEC22A-201ENST00000309934 NUTM2GQ5VZR2 741 aa7.41□□□□□ -1.22
SEC22A-201ENST00000309934 SLAIN2Q9P270 581 aa7.41□□□□□ -1.22
SEC22A-201ENST00000309934 ERC1Q8IUD2 1116 aa7.41□□□□□ -1.22
SEC22A-201ENST00000309934 BCCIPQ9P287 314 aaKnown RBP eCLIP7.41□□□□□ -1.22
SEC22A-201ENST00000309934 C1orf167Q5SNV9 1468 aa7.41□□□□□ -1.22
SEC22A-201ENST00000309934 CABP4P57796 275 aa7.41□□□□□ -1.22
SEC22A-201ENST00000309934 XRN1Q8IZH2 1706 aaKnown RBP7.41□□□□□ -1.22
SEC22A-201ENST00000309934 TNS3Q68CZ2 1445 aa7.4□□□□□ -1.22
SEC22A-201ENST00000309934 HYPKQ9NX55 129 aa7.4□□□□□ -1.22
SEC22A-201ENST00000309934 LMTK3Q96Q04 1460 aa7.4□□□□□ -1.22
SEC22A-201ENST00000309934 BTBD11A6QL63 1104 aa7.4□□□□□ -1.22
SEC22A-201ENST00000309934 FAM161AQ3B820 660 aa7.4□□□□□ -1.22
SEC22A-201ENST00000309934 CHMP4CQ96CF2 233 aa7.4□□□□□ -1.22
SEC22A-201ENST00000309934 NWD1Q149M9 1564 aa7.4□□□□□ -1.23
SEC22A-201ENST00000309934 SHPRHQ149N8 1683 aa7.4□□□□□ -1.23
SEC22A-201ENST00000309934 FKBP5Q13451 457 aaPredicted RBP7.4□□□□□ -1.23
SEC22A-201ENST00000309934 HDGFL1Q5TGJ6 251 aa7.4□□□□□ -1.23
SEC22A-201ENST00000309934 HSP90AB2PQ58FF8 381 aa7.39□□□□□ -1.23
SEC22A-201ENST00000309934 PLEKHF1Q96S99 279 aa7.39□□□□□ -1.23
SEC22A-201ENST00000309934 PRDM10Q9NQV6 1147 aa7.39□□□□□ -1.23
SEC22A-201ENST00000309934 COG6Q9Y2V7 657 aa7.39□□□□□ -1.23
SEC22A-201ENST00000309934 PCDH11XQ9BZA7 1347 aa7.39□□□□□ -1.23
SEC22A-201ENST00000309934 PCDH11YQ9BZA8 1340 aa7.39□□□□□ -1.23
SEC22A-201ENST00000309934 NRXN3Q9Y4C0 1643 aa7.39□□□□□ -1.23
SEC22A-201ENST00000309934 SF3B2Q13435 895 aaKnown RBP7.39□□□□□ -1.23
SEC22A-201ENST00000309934 USP54Q70EL1 1684 aa7.39□□□□□ -1.23
SEC22A-201ENST00000309934 DCAF5Q96JK2 942 aa7.39□□□□□ -1.23
SEC22A-201ENST00000309934 EYA1Q99502 592 aa7.39□□□□□ -1.23
SEC22A-201ENST00000309934 DBF4Q9UBU7 674 aaPredicted RBP7.39□□□□□ -1.23
SEC22A-201ENST00000309934 ABCC6O95255 1503 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 GNAI2P04899 355 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 PLCB2Q00722 1185 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 ARHGEF25Q86VW2 580 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 SRCIN1Q9C0H9 1055 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 FBXO3Q9UK99 471 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 NOB1Q9ULX3 412 aaKnown RBP7.38□□□□□ -1.23
SEC22A-201ENST00000309934 OVOS2A0A0G2JMS6 1433 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 ERBB4Q15303 1308 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 MON2Q7Z3U7 1717 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 FMN2Q9NZ56 1722 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 HSP90AB3PQ58FF7 597 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 FMNL2Q96PY5 1086 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms