RNA–Protein interactions for RNA: ENST00000308153.8

H2AFV-202, Transcript of H2A histone family member V, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene H2AFV, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-202ENST00000308153 ZCRB1Q8TBF4 217 aaKnown RBP39.96■■■■□ 3.99
H2AFV-202ENST00000308153 ANKRD26Q9UPS8 1709 aa39.94■■■■□ 3.98
H2AFV-202ENST00000308153 KAT6BQ8WYB5 2073 aa39.92■■■■□ 3.98
H2AFV-202ENST00000308153 PDGFDQ9GZP0 370 aaPredicted RBP39.92■■■■□ 3.98
H2AFV-202ENST00000308153 PAPPAQ13219 1627 aa39.91■■■■□ 3.98
H2AFV-202ENST00000308153 SPON1Q9HCB6 807 aa39.91■■■■□ 3.98
H2AFV-202ENST00000308153 DOT1LQ8TEK3 1739 aa39.9■■■■□ 3.98
H2AFV-202ENST00000308153 SLC15A2Q16348 729 aa39.89■■■■□ 3.98
H2AFV-202ENST00000308153 STK32BQ9NY57 414 aa39.89■■■■□ 3.98
H2AFV-202ENST00000308153 RAPGEF4Q8WZA2 1011 aa39.88■■■■□ 3.97
H2AFV-202ENST00000308153 NSD2O96028 1365 aa39.85■■■■□ 3.97
H2AFV-202ENST00000308153 NCAPD2Q15021 1401 aa39.84■■■■□ 3.97
H2AFV-202ENST00000308153 PRIM1P49642 420 aaKnown RBP39.84■■■■□ 3.97
H2AFV-202ENST00000308153 LRRC4BQ9NT99 713 aa39.84■■■■□ 3.97
H2AFV-202ENST00000308153 MAP2P11137 1827 aaKnown RBP39.84■■■■□ 3.97
H2AFV-202ENST00000308153 PPM1GO15355 546 aaPredicted RBP39.83■■■■□ 3.97
H2AFV-202ENST00000308153 TATP17735 454 aaPredicted RBP39.83■■■■□ 3.97
H2AFV-202ENST00000308153 PANK3Q9H999 370 aa39.83■■■■□ 3.97
H2AFV-202ENST00000308153 WASHC2AQ641Q2 1341 aa39.83■■■■□ 3.97
H2AFV-202ENST00000308153 POLKQ9UBT6 870 aa39.82■■■■□ 3.97
H2AFV-202ENST00000308153 SYTL4Q96C24 671 aaPredicted RBP39.81■■■■□ 3.96
H2AFV-202ENST00000308153 ZBTB7AO95365 584 aa39.77■■■■□ 3.96
H2AFV-202ENST00000308153 PCDH11XQ9BZA7 1347 aa39.76■■■■□ 3.96
H2AFV-202ENST00000308153 PCDH11YQ9BZA8 1340 aa39.76■■■■□ 3.96
H2AFV-202ENST00000308153 ZNF827Q17R98 1081 aa39.76■■■■□ 3.96
H2AFV-202ENST00000308153 SLC27A3Q5K4L6 730 aa39.75■■■■□ 3.95
H2AFV-202ENST00000308153 PPP1R1BQ9UD71 204 aaPredicted RBP39.75■■■■□ 3.95
H2AFV-202ENST00000308153 LY75O60449 1722 aa39.74■■■■□ 3.95
H2AFV-202ENST00000308153 PKD1L3Q7Z443 1732 aa39.74■■■■□ 3.95
H2AFV-202ENST00000308153 TNNT2P45379 298 aaPredicted RBP39.73■■■■□ 3.95
H2AFV-202ENST00000308153 PTGER2P43116 358 aa39.72■■■■□ 3.95
H2AFV-202ENST00000308153 EYA1Q99502 592 aa39.72■■■■□ 3.95
H2AFV-202ENST00000308153 CYP27B1O15528 508 aa39.71■■■■□ 3.95
H2AFV-202ENST00000308153 AKT1S1Q96B36 256 aa39.69■■■■□ 3.94
H2AFV-202ENST00000308153 ATF5Q9Y2D1 282 aaPredicted RBP39.69■■■■□ 3.94
H2AFV-202ENST00000308153 KCNQ4P56696 695 aa39.67■■■■□ 3.94
H2AFV-202ENST00000308153 MTFR1LQ9H019 292 aa39.66■■■■□ 3.94
H2AFV-202ENST00000308153 EIF4A2Q14240 407 aaKnown RBP39.65■■■■□ 3.94
H2AFV-202ENST00000308153 TOGARAM1Q9Y4F4 1720 aa39.65■■■■□ 3.94
H2AFV-202ENST00000308153 SGIP1Q9BQI5 828 aa39.63■■■■□ 3.93
H2AFV-202ENST00000308153 QSER1Q2KHR3 1735 aa39.62■■■■□ 3.93
H2AFV-202ENST00000308153 KIF7Q2M1P5 1343 aa39.62■■■■□ 3.93
H2AFV-202ENST00000308153 CCNL1Q9UK58 526 aaPredicted RBP39.59■■■■□ 3.93
H2AFV-202ENST00000308153 NKX1-1Q15270 411 aaPredicted RBP39.58■■■■□ 3.93
H2AFV-202ENST00000308153 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP39.58■■■■□ 3.932e-6■□□□□ 8.4
H2AFV-202ENST00000308153 SPG7Q9UQ90 795 aa39.58■■■■□ 3.93
H2AFV-202ENST00000308153 TUBGCP6Q96RT7 1819 aa39.58■■■■□ 3.93
H2AFV-202ENST00000308153 KNSTRNQ9Y448 316 aa39.56■■■■□ 3.92
H2AFV-202ENST00000308153 PNPLA7Q6ZV29 1317 aa39.56■■■■□ 3.92
H2AFV-202ENST00000308153 MORC1Q86VD1 984 aa39.55■■■■□ 3.92
H2AFV-202ENST00000308153 ITGB4P16144 1822 aa39.55■■■■□ 3.92
H2AFV-202ENST00000308153 IGSF1Q8N6C5 1336 aa39.55■■■■□ 3.92
H2AFV-202ENST00000308153 MPRIPQ6WCQ1 1025 aa39.54■■■■□ 3.92
H2AFV-202ENST00000308153 PLEKHG2Q9H7P9 1386 aa39.52■■■■□ 3.92
H2AFV-202ENST00000308153 AMER1Q5JTC6 1135 aaPredicted RBP39.52■■■■□ 3.92
H2AFV-202ENST00000308153 PALLDQ8WX93 1383 aa39.51■■■■□ 3.92
H2AFV-202ENST00000308153 TFCP2L1Q9NZI6 479 aa39.51■■■■□ 3.92
H2AFV-202ENST00000308153 PHKG2P15735 406 aa39.48■■■■□ 3.91
H2AFV-202ENST00000308153 SLC16A10Q8TF71 515 aa39.48■■■■□ 3.91
H2AFV-202ENST00000308153 PIGBQ92521 554 aa39.47■■■■□ 3.91
H2AFV-202ENST00000308153 FHDC1Q9C0D6 1143 aaPredicted RBP39.47■■■■□ 3.91
H2AFV-202ENST00000308153 C5P01031 1676 aa39.46■■■■□ 3.91
H2AFV-202ENST00000308153 IFNL2Q8IZJ0 200 aa39.46■■■■□ 3.91
H2AFV-202ENST00000308153 COL24A1Q17RW2 1714 aa39.45■■■■□ 3.91
H2AFV-202ENST00000308153 ARXQ96QS3 562 aa39.43■■■■□ 3.9
H2AFV-202ENST00000308153 SYT17Q9BSW7 474 aa39.43■■■■□ 3.9
H2AFV-202ENST00000308153 TAF1LQ8IZX4 1826 aa39.42■■■■□ 3.9
H2AFV-202ENST00000308153 SMARCC1Q92922 1105 aaPredicted RBP39.42■■■■□ 3.9
H2AFV-202ENST00000308153 PER1O15534 1290 aaPredicted RBP39.41■■■■□ 3.9
H2AFV-202ENST00000308153 MAP3K5Q99683 1374 aa39.37■■■■□ 3.89
H2AFV-202ENST00000308153 AEBP1Q8IUX7 1158 aa39.37■■■■□ 3.89
H2AFV-202ENST00000308153 COL23A1Q86Y22 540 aaPredicted RBP39.36■■■■□ 3.89
H2AFV-202ENST00000308153 TMOD3Q9NYL9 352 aa39.36■■■■□ 3.89
H2AFV-202ENST00000308153 IL13P35225 146 aa39.34■■■■□ 3.89
H2AFV-202ENST00000308153 C4BP0C0L5 1744 aa39.34■■■■□ 3.89
H2AFV-202ENST00000308153 DCAF8L1A6NGE4 600 aa39.33■■■■□ 3.89
H2AFV-202ENST00000308153 HMGB2P26583 209 aaKnown RBP39.32■■■■□ 3.89
H2AFV-202ENST00000308153 PLEKHO1Q53GL0 409 aaPredicted RBP39.32■■■■□ 3.89
H2AFV-202ENST00000308153 ASAP1Q9ULH1 1129 aa39.32■■■■□ 3.89
H2AFV-202ENST00000308153 KDRP35968 1356 aa39.32■■■■□ 3.88
H2AFV-202ENST00000308153 UTRNP46939 3433 aa39.31■■■■□ 3.88
H2AFV-202ENST00000308153 POLD1P28340 1107 aa39.3■■■■□ 3.88
H2AFV-202ENST00000308153 LOC102724428A0A0B4J2F2 783 aa39.29■■■■□ 3.88
H2AFV-202ENST00000308153 SIK1P57059 783 aa39.29■■■■□ 3.88
H2AFV-202ENST00000308153 AMOTQ4VCS5 1084 aa39.29■■■■□ 3.88
H2AFV-202ENST00000308153 SULT6B1Q6IMI4 303 aa39.28■■■■□ 3.88
H2AFV-202ENST00000308153 KDM6AO15550 1401 aaPredicted RBP39.28■■■■□ 3.88
H2AFV-202ENST00000308153 MSH5O43196 834 aa39.27■■■■□ 3.88
H2AFV-202ENST00000308153 MTHFSP49914 203 aa39.27■■■■□ 3.88
H2AFV-202ENST00000308153 ZNF530Q6P9A1 599 aaPredicted RBP39.27■■■■□ 3.88
H2AFV-202ENST00000308153 ATG3Q9NT62 314 aa39.27■■■■□ 3.88
H2AFV-202ENST00000308153 HSP90AB1P08238 724 aaKnown RBP39.26■■■■□ 3.88
H2AFV-202ENST00000308153 CC2D1BQ5T0F9 858 aaKnown RBP39.26■■■■□ 3.88
H2AFV-202ENST00000308153 AMIGO3Q86WK7 504 aa39.26■■■■□ 3.88
H2AFV-202ENST00000308153 DCAF5Q96JK2 942 aa39.26■■■■□ 3.88
H2AFV-202ENST00000308153 ERVV-2B6SEH9 535 aa39.25■■■■□ 3.87
H2AFV-202ENST00000308153 YY1P25490 414 aa39.24■■■■□ 3.87
H2AFV-202ENST00000308153 FLAD1Q8NFF5 587 aa39.24■■■■□ 3.87
H2AFV-202ENST00000308153 NPC1L1Q9UHC9 1359 aa39.23■■■■□ 3.87
H2AFV-202ENST00000308153 LINC00116Q8NCU8 138 aa39.23■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms