RNA–Protein interactions for RNA: ENST00000307367.2

CLCN5-201, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-201ENST00000307367 FANCIQ9NVI1 1328 aa9.42□□□□□ -0.9
CLCN5-201ENST00000307367 UBAP1LF5GYI3 381 aa9.42□□□□□ -0.9
CLCN5-201ENST00000307367 RRP1P56182 461 aaKnown RBP9.42□□□□□ -0.9
CLCN5-201ENST00000307367 RTF1Q92541 710 aaKnown RBP9.42□□□□□ -0.9
CLCN5-201ENST00000307367 PIP4K2BP78356 416 aa9.41□□□□□ -0.9
CLCN5-201ENST00000307367 AMOTQ4VCS5 1084 aa9.41□□□□□ -0.9
CLCN5-201ENST00000307367 CFAP44Q96MT7 982 aa9.41□□□□□ -0.9
CLCN5-201ENST00000307367 COL14A1Q05707 1796 aaKnown RBP9.41□□□□□ -0.9
CLCN5-201ENST00000307367 FAM83GA6ND36 823 aa9.41□□□□□ -0.9
CLCN5-201ENST00000307367 ZNF853P0CG23 659 aa9.41□□□□□ -0.9
CLCN5-201ENST00000307367 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
CLCN5-201ENST00000307367 NLRP2Q9NX02 1062 aa9.41□□□□□ -0.9
CLCN5-201ENST00000307367 LRRC37A3O60309 1634 aa9.41□□□□□ -0.9
CLCN5-201ENST00000307367 COL5A2P05997 1499 aaPredicted RBP9.41□□□□□ -0.9
CLCN5-201ENST00000307367 MAP3K5Q99683 1374 aa9.41□□□□□ -0.9
CLCN5-201ENST00000307367 GNAT3A8MTJ3 354 aa9.4□□□□□ -0.9
CLCN5-201ENST00000307367 PLEKHO1Q53GL0 409 aaPredicted RBP9.4□□□□□ -0.9
CLCN5-201ENST00000307367 TSR2Q969E8 191 aaKnown RBP9.4□□□□□ -0.9
CLCN5-201ENST00000307367 THUMPD2Q9BTF0 503 aaKnown RBP9.4□□□□□ -0.9
CLCN5-201ENST00000307367 WDR17Q8IZU2 1322 aa9.4□□□□□ -0.9
CLCN5-201ENST00000307367 CERKQ8TCT0 537 aa9.4□□□□□ -0.9
CLCN5-201ENST00000307367 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.9
CLCN5-201ENST00000307367 DCTN1Q14203 1278 aa9.4□□□□□ -0.91
CLCN5-201ENST00000307367 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.4□□□□□ -0.91
CLCN5-201ENST00000307367 MCM10Q7L590 875 aa9.39□□□□□ -0.91
CLCN5-201ENST00000307367 RAPGEF4Q8WZA2 1011 aa9.39□□□□□ -0.91
CLCN5-201ENST00000307367 LAS1LQ9Y4W2 734 aaKnown RBP9.39□□□□□ -0.91
CLCN5-201ENST00000307367 IRX6P78412 446 aaPredicted RBP9.39□□□□□ -0.91
CLCN5-201ENST00000307367 EXOSC9Q06265 439 aaKnown RBP9.39□□□□□ -0.91
CLCN5-201ENST00000307367 CRB1P82279 1406 aa9.39□□□□□ -0.91
CLCN5-201ENST00000307367 PARP4Q9UKK3 1724 aaKnown RBP9.38□□□□□ -0.91
CLCN5-201ENST00000307367 TATP17735 454 aaPredicted RBP9.38□□□□□ -0.91
CLCN5-201ENST00000307367 AKAP4Q5JQC9 854 aa9.38□□□□□ -0.91
CLCN5-201ENST00000307367 ZNF428Q96B54 188 aa9.38□□□□□ -0.91
CLCN5-201ENST00000307367 MBIPQ9NS73 344 aa9.38□□□□□ -0.91
CLCN5-201ENST00000307367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLCN5-201ENST00000307367 PKD1L3Q7Z443 1732 aa9.38□□□□□ -0.91
CLCN5-201ENST00000307367 CHL1O00533 1208 aa9.38□□□□□ -0.91
CLCN5-201ENST00000307367 RARSP54136 660 aaKnown RBP9.38□□□□□ -0.91
CLCN5-201ENST00000307367 ZNF530Q6P9A1 599 aaPredicted RBP9.37□□□□□ -0.91
CLCN5-201ENST00000307367 CEMIPQ8WUJ3 1361 aa9.37□□□□□ -0.91
CLCN5-201ENST00000307367 C1orf141Q5JVX7 400 aa9.37□□□□□ -0.91
CLCN5-201ENST00000307367 TOM1L2Q6ZVM7 507 aa9.37□□□□□ -0.91
CLCN5-201ENST00000307367 MEGF6O75095 1541 aa9.37□□□□□ -0.91
CLCN5-201ENST00000307367 OVOS2A0A0G2JMS6 1433 aa9.37□□□□□ -0.91
CLCN5-201ENST00000307367 CARD10Q9BWT7 1032 aa9.36□□□□□ -0.91
CLCN5-201ENST00000307367 BABAM1Q9NWV8 329 aa9.36□□□□□ -0.91
CLCN5-201ENST00000307367 BCAR3O75815 825 aa9.36□□□□□ -0.91
CLCN5-201ENST00000307367 EVA1CP58658 441 aa9.36□□□□□ -0.91
CLCN5-201ENST00000307367 IL17REQ8NFR9 667 aa9.36□□□□□ -0.91
CLCN5-201ENST00000307367 SPG7Q9UQ90 795 aa9.36□□□□□ -0.91
CLCN5-201ENST00000307367 PLCH1Q4KWH8 1693 aa9.36□□□□□ -0.91
CLCN5-201ENST00000307367 ADAMTS7Q9UKP4 1686 aa9.36□□□□□ -0.91
CLCN5-201ENST00000307367 BTG4Q9NY30 223 aa9.36□□□□□ -0.91
CLCN5-201ENST00000307367 PLIN1O60240 522 aa9.35□□□□□ -0.91
CLCN5-201ENST00000307367 JCADQ9P266 1359 aa9.35□□□□□ -0.91
CLCN5-201ENST00000307367 SCN11AQ9UI33 1791 aa9.35□□□□□ -0.91
CLCN5-201ENST00000307367 ALDH1L2Q3SY69 923 aa9.35□□□□□ -0.91
CLCN5-201ENST00000307367 STRN4Q9NRL3 753 aa9.35□□□□□ -0.91
CLCN5-201ENST00000307367 TAF7Q15545 349 aaPredicted RBP9.34□□□□□ -0.91
CLCN5-201ENST00000307367 TSPYL4Q9UJ04 414 aa9.34□□□□□ -0.91
CLCN5-201ENST00000307367 NWD2Q9ULI1 1742 aa9.34□□□□□ -0.91
CLCN5-201ENST00000307367 LARP1Q6PKG0 1096 aaKnown RBP9.34□□□□□ -0.91
CLCN5-201ENST00000307367 PPP4R2Q9NY27 417 aa9.34□□□□□ -0.91
CLCN5-201ENST00000307367 SIPA1L3O60292 1781 aaPredicted RBP9.34□□□□□ -0.91
CLCN5-201ENST00000307367 VAMP4O75379 141 aa9.34□□□□□ -0.91
CLCN5-201ENST00000307367 TWISTNBQ3B726 338 aaPredicted RBP9.34□□□□□ -0.91
CLCN5-201ENST00000307367 NRAPQ86VF7 1730 aa9.33□□□□□ -0.92
CLCN5-201ENST00000307367 KDM3BQ7LBC6 1761 aa9.33□□□□□ -0.92
CLCN5-201ENST00000307367 RNMTO43148 476 aaKnown RBP9.33□□□□□ -0.92
CLCN5-201ENST00000307367 IL2RBP14784 551 aa9.33□□□□□ -0.92
CLCN5-201ENST00000307367 IFNL2Q8IZJ0 200 aa9.33□□□□□ -0.92
CLCN5-201ENST00000307367 PHKG2P15735 406 aa9.33□□□□□ -0.92
CLCN5-201ENST00000307367 CANXP27824 592 aaKnown RBP9.33□□□□□ -0.92
CLCN5-201ENST00000307367 BRPF1P55201 1214 aaPredicted RBP9.33□□□□□ -0.92
CLCN5-201ENST00000307367 TEFQ10587 303 aa9.33□□□□□ -0.92
CLCN5-201ENST00000307367 MPRIPQ6WCQ1 1025 aa9.33□□□□□ -0.92
CLCN5-201ENST00000307367 LGR6Q9HBX8 967 aa9.33□□□□□ -0.92
CLCN5-201ENST00000307367 SMC4Q9NTJ3 1288 aa9.33□□□□□ -0.92
CLCN5-201ENST00000307367 PDE3AQ14432 1141 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 TSPYL6Q8N831 410 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 C8orf58Q8NAV2 365 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 SSH1Q8WYL5 1049 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 ADAMTS2O95450 1211 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 HSP90AB1P08238 724 aaKnown RBP9.32□□□□□ -0.92
CLCN5-201ENST00000307367 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 KIF16BQ96L93 1317 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 WNK3Q9BYP7 1800 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 SHANK3Q9BYB0 1731 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 SOS1Q07889 1333 aaPredicted RBP9.32□□□□□ -0.92
CLCN5-201ENST00000307367 PCDH11XQ9BZA7 1347 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 PCDH11YQ9BZA8 1340 aa9.32□□□□□ -0.92
CLCN5-201ENST00000307367 FRAT1Q92837 279 aaPredicted RBP9.32□□□□□ -0.92
CLCN5-201ENST00000307367 CACNA1FO60840 1977 aa9.31□□□□□ -0.92
CLCN5-201ENST00000307367 SPATA31A6Q5VVP1 1343 aa9.31□□□□□ -0.92
CLCN5-201ENST00000307367 NUTM2BA6NNL0 878 aaPredicted RBP9.31□□□□□ -0.92
CLCN5-201ENST00000307367 NUTM2EB1AL46 878 aaPredicted RBP9.31□□□□□ -0.92
CLCN5-201ENST00000307367 NUTM2AQ8IVF1 878 aaPredicted RBP9.31□□□□□ -0.92
CLCN5-201ENST00000307367 ZCRB1Q8TBF4 217 aaKnown RBP9.31□□□□□ -0.92
CLCN5-201ENST00000307367 MIS18AQ9NYP9 233 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms