RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 RAPGEF4Q8WZA2 1011 aa21.53■■□□□ 1.04
FANCA-201ENST00000305699 BTAF1O14981 1849 aa21.52■■□□□ 1.04
FANCA-201ENST00000305699 TATP17735 454 aaPredicted RBP21.5■■□□□ 1.03
FANCA-201ENST00000305699 SYTL4Q96C24 671 aaPredicted RBP21.5■■□□□ 1.03
FANCA-201ENST00000305699 PANK3Q9H999 370 aa21.5■■□□□ 1.03
FANCA-201ENST00000305699 STK32BQ9NY57 414 aa21.5■■□□□ 1.03
FANCA-201ENST00000305699 MAP2P11137 1827 aaKnown RBP21.48■■□□□ 1.03
FANCA-201ENST00000305699 TNNT2P45379 298 aaPredicted RBP21.48■■□□□ 1.03
FANCA-201ENST00000305699 SHANK3Q9BYB0 1731 aa21.48■■□□□ 1.03
FANCA-201ENST00000305699 SPON1Q9HCB6 807 aa21.47■■□□□ 1.03
FANCA-201ENST00000305699 DOT1LQ8TEK3 1739 aa21.47■■□□□ 1.03
FANCA-201ENST00000305699 ANKRD26Q9UPS8 1709 aa21.47■■□□□ 1.03
FANCA-201ENST00000305699 PRIM1P49642 420 aaKnown RBP21.46■■□□□ 1.03
FANCA-201ENST00000305699 SLC15A2Q16348 729 aa21.46■■□□□ 1.03
FANCA-201ENST00000305699 PPP1R1BQ9UD71 204 aaPredicted RBP21.46■■□□□ 1.03
FANCA-201ENST00000305699 WASHC2AQ641Q2 1341 aa21.45■■□□□ 1.02
FANCA-201ENST00000305699 POLKQ9UBT6 870 aa21.45■■□□□ 1.02
FANCA-201ENST00000305699 CASZ1Q86V15 1759 aa21.43■■□□□ 1.02
FANCA-201ENST00000305699 PCDH11XQ9BZA7 1347 aa21.43■■□□□ 1.02
FANCA-201ENST00000305699 PCDH11YQ9BZA8 1340 aa21.43■■□□□ 1.02
FANCA-201ENST00000305699 PDGFDQ9GZP0 370 aaPredicted RBP21.43■■□□□ 1.02
FANCA-201ENST00000305699 ZBTB7AO95365 584 aa21.41■■□□□ 1.02
FANCA-201ENST00000305699 NSD2O96028 1365 aa21.41■■□□□ 1.02
FANCA-201ENST00000305699 PAPPAQ13219 1627 aa21.4■■□□□ 1.02
FANCA-201ENST00000305699 SLC27A3Q5K4L6 730 aa21.39■■□□□ 1.02
FANCA-201ENST00000305699 LRRC4BQ9NT99 713 aa21.39■■□□□ 1.02
FANCA-201ENST00000305699 KNSTRNQ9Y448 316 aa21.39■■□□□ 1.02
FANCA-201ENST00000305699 MORC1Q86VD1 984 aa21.38■■□□□ 1.01
FANCA-201ENST00000305699 EYA1Q99502 592 aa21.38■■□□□ 1.01
FANCA-201ENST00000305699 KIF7Q2M1P5 1343 aa21.37■■□□□ 1.01
FANCA-201ENST00000305699 NCAPD2Q15021 1401 aa21.37■■□□□ 1.01
FANCA-201ENST00000305699 EIF4A2Q14240 407 aaKnown RBP21.37■■□□□ 1.01
FANCA-201ENST00000305699 ZNF827Q17R98 1081 aa21.37■■□□□ 1.01
FANCA-201ENST00000305699 ATF5Q9Y2D1 282 aaPredicted RBP21.37■■□□□ 1.01
FANCA-201ENST00000305699 PKD1L3Q7Z443 1732 aa21.36■■□□□ 1.01
FANCA-201ENST00000305699 CYP27B1O15528 508 aa21.36■■□□□ 1.01
FANCA-201ENST00000305699 KCNQ4P56696 695 aa21.36■■□□□ 1.01
FANCA-201ENST00000305699 SPG7Q9UQ90 795 aa21.36■■□□□ 1.01
FANCA-201ENST00000305699 LY75O60449 1722 aa21.34■■□□□ 1.01
FANCA-201ENST00000305699 CCNL1Q9UK58 526 aaPredicted RBP21.34■■□□□ 1.01
FANCA-201ENST00000305699 MPRIPQ6WCQ1 1025 aa21.33■■□□□ 1.01
FANCA-201ENST00000305699 MTFR1LQ9H019 292 aa21.33■■□□□ 1.01
FANCA-201ENST00000305699 AKT1S1Q96B36 256 aa21.31■■□□□ 1
FANCA-201ENST00000305699 TFCP2L1Q9NZI6 479 aa21.3■■□□□ 1
FANCA-201ENST00000305699 TOGARAM1Q9Y4F4 1720 aa21.3■■□□□ 1
FANCA-201ENST00000305699 PTGER2P43116 358 aa21.29■■□□□ 1
FANCA-201ENST00000305699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.29■■□□□ 12e-7■■□□□ 12.4
FANCA-201ENST00000305699 ITGB4P16144 1822 aa21.29■■□□□ 1
FANCA-201ENST00000305699 IGSF1Q8N6C5 1336 aa21.28■■□□□ 1
FANCA-201ENST00000305699 PALLDQ8WX93 1383 aa21.28■■□□□ 1
FANCA-201ENST00000305699 AMER1Q5JTC6 1135 aaPredicted RBP21.28■■□□□ 1
FANCA-201ENST00000305699 QSER1Q2KHR3 1735 aa21.27■■□□□ 1
FANCA-201ENST00000305699 NKX1-1Q15270 411 aaPredicted RBP21.27■■□□□ 1
FANCA-201ENST00000305699 IFNL2Q8IZJ0 200 aa21.27■■□□□ 1
FANCA-201ENST00000305699 TUBGCP6Q96RT7 1819 aa21.26■□□□□ 0.99
FANCA-201ENST00000305699 DCAF8L1A6NGE4 600 aa21.26■□□□□ 0.99
FANCA-201ENST00000305699 PHKG2P15735 406 aa21.26■□□□□ 0.99
FANCA-201ENST00000305699 PNPLA7Q6ZV29 1317 aa21.26■□□□□ 0.99
FANCA-201ENST00000305699 PIGBQ92521 554 aa21.25■□□□□ 0.99
FANCA-201ENST00000305699 SMARCC1Q92922 1105 aaPredicted RBP21.25■□□□□ 0.99
FANCA-201ENST00000305699 TMOD3Q9NYL9 352 aa21.24■□□□□ 0.99
FANCA-201ENST00000305699 SLC16A10Q8TF71 515 aa21.23■□□□□ 0.99
FANCA-201ENST00000305699 C5P01031 1676 aa21.23■□□□□ 0.99
FANCA-201ENST00000305699 MSH5O43196 834 aa21.22■□□□□ 0.99
FANCA-201ENST00000305699 PLEKHO1Q53GL0 409 aaPredicted RBP21.22■□□□□ 0.99
FANCA-201ENST00000305699 CC2D1BQ5T0F9 858 aaKnown RBP21.22■□□□□ 0.99
FANCA-201ENST00000305699 ARXQ96QS3 562 aa21.22■□□□□ 0.99
FANCA-201ENST00000305699 SGIP1Q9BQI5 828 aa21.22■□□□□ 0.99
FANCA-201ENST00000305699 FHDC1Q9C0D6 1143 aaPredicted RBP21.22■□□□□ 0.99
FANCA-201ENST00000305699 PLEKHG2Q9H7P9 1386 aa21.22■□□□□ 0.99
FANCA-201ENST00000305699 HMGB2P26583 209 aaKnown RBP21.21■□□□□ 0.99
FANCA-201ENST00000305699 AEBP1Q8IUX7 1158 aa21.21■□□□□ 0.99
FANCA-201ENST00000305699 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
FANCA-201ENST00000305699 PER1O15534 1290 aaPredicted RBP21.2■□□□□ 0.98
FANCA-201ENST00000305699 POLD1P28340 1107 aa21.2■□□□□ 0.98
FANCA-201ENST00000305699 SULT6B1Q6IMI4 303 aa21.2■□□□□ 0.98
FANCA-201ENST00000305699 ZNF530Q6P9A1 599 aaPredicted RBP21.2■□□□□ 0.98
FANCA-201ENST00000305699 TAF1LQ8IZX4 1826 aa21.19■□□□□ 0.98
FANCA-201ENST00000305699 IL13P35225 146 aa21.19■□□□□ 0.98
FANCA-201ENST00000305699 MTHFSP49914 203 aa21.19■□□□□ 0.98
FANCA-201ENST00000305699 AMOTQ4VCS5 1084 aa21.19■□□□□ 0.98
FANCA-201ENST00000305699 SYT17Q9BSW7 474 aa21.19■□□□□ 0.98
FANCA-201ENST00000305699 HSP90AB1P08238 724 aaKnown RBP21.18■□□□□ 0.98
FANCA-201ENST00000305699 COL23A1Q86Y22 540 aaPredicted RBP21.17■□□□□ 0.98
FANCA-201ENST00000305699 KLHL34Q8N239 644 aa21.17■□□□□ 0.98
FANCA-201ENST00000305699 ASAP1Q9ULH1 1129 aa21.17■□□□□ 0.98
FANCA-201ENST00000305699 LOC102724428A0A0B4J2F2 783 aa21.16■□□□□ 0.98
FANCA-201ENST00000305699 SIK1P57059 783 aa21.16■□□□□ 0.98
FANCA-201ENST00000305699 C1orf141Q5JVX7 400 aa21.16■□□□□ 0.98
FANCA-201ENST00000305699 DCAF5Q96JK2 942 aa21.16■□□□□ 0.98
FANCA-201ENST00000305699 AK7Q96M32 723 aa21.16■□□□□ 0.98
FANCA-201ENST00000305699 C4BP0C0L5 1744 aa21.16■□□□□ 0.98
FANCA-201ENST00000305699 ERVV-2B6SEH9 535 aa21.15■□□□□ 0.98
FANCA-201ENST00000305699 FLAD1Q8NFF5 587 aa21.14■□□□□ 0.98
FANCA-201ENST00000305699 KDRP35968 1356 aa21.13■□□□□ 0.97
FANCA-201ENST00000305699 ATP6V1AP38606 617 aa21.12■□□□□ 0.97
FANCA-201ENST00000305699 CABP4P57796 275 aa21.12■□□□□ 0.97
FANCA-201ENST00000305699 MSL1Q68DK7 614 aa21.12■□□□□ 0.97
FANCA-201ENST00000305699 ATG3Q9NT62 314 aa21.12■□□□□ 0.97
FANCA-201ENST00000305699 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms