RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 TSC1Q92574 1164 aa14.59□□□□□ -0.07
PDGFD-201ENST00000302251 PPRC1Q5VV67 1664 aaKnown RBP14.59□□□□□ -0.07
PDGFD-201ENST00000302251 HCLS1P14317 486 aaPredicted RBP14.59□□□□□ -0.07
PDGFD-201ENST00000302251 STK3Q13188 491 aa14.59□□□□□ -0.07
PDGFD-201ENST00000302251 WDR33Q9C0J8 1336 aaKnown RBP14.59□□□□□ -0.07
PDGFD-201ENST00000302251 MCM2P49736 904 aa14.59□□□□□ -0.07
PDGFD-201ENST00000302251 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
PDGFD-201ENST00000302251 IFIT2P09913 472 aaKnown RBP14.58□□□□□ -0.07
PDGFD-201ENST00000302251 GORABQ5T7V8 394 aa14.58□□□□□ -0.07
PDGFD-201ENST00000302251 MCM10Q7L590 875 aa14.58□□□□□ -0.07
PDGFD-201ENST00000302251 UBTFL1P0CB47 393 aaPredicted RBP14.58□□□□□ -0.08
PDGFD-201ENST00000302251 PPP4R3BQ5MIZ7 849 aa14.58□□□□□ -0.08
PDGFD-201ENST00000302251 SNX21Q969T3 373 aa14.58□□□□□ -0.08
PDGFD-201ENST00000302251 ZNF330Q9Y3S2 320 aaPredicted RBP14.58□□□□□ -0.08
PDGFD-201ENST00000302251 USP19O94966 1318 aa14.58□□□□□ -0.08
PDGFD-201ENST00000302251 SHPRHQ149N8 1683 aa14.58□□□□□ -0.08
PDGFD-201ENST00000302251 NUTM2GQ5VZR2 741 aa14.58□□□□□ -0.08
PDGFD-201ENST00000302251 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.58□□□□□ -0.08
PDGFD-201ENST00000302251 NUTM1Q86Y26 1132 aa14.57□□□□□ -0.08
PDGFD-201ENST00000302251 CDK19Q9BWU1 502 aa14.57□□□□□ -0.08
PDGFD-201ENST00000302251 ZBTB40Q9NUA8 1239 aa14.57□□□□□ -0.08
PDGFD-201ENST00000302251 FRMPD1Q5SYB0 1578 aa14.57□□□□□ -0.08
PDGFD-201ENST00000302251 FCHSD2O94868 740 aa14.57□□□□□ -0.08
PDGFD-201ENST00000302251 CWC27Q6UX04 472 aaKnown RBP14.57□□□□□ -0.08
PDGFD-201ENST00000302251 TSPYL6Q8N831 410 aa14.57□□□□□ -0.08
PDGFD-201ENST00000302251 ZKSCAN5Q9Y2L8 839 aa14.57□□□□□ -0.08
PDGFD-201ENST00000302251 ASXL1Q8IXJ9 1541 aa14.57□□□□□ -0.08
PDGFD-201ENST00000302251 ADCY5O95622 1261 aa14.57□□□□□ -0.08
PDGFD-201ENST00000302251 GNAI2P04899 355 aa14.56□□□□□ -0.08
PDGFD-201ENST00000302251 SDSP20132 328 aa14.56□□□□□ -0.08
PDGFD-201ENST00000302251 RUFY2Q8WXA3 655 aa14.56□□□□□ -0.08
PDGFD-201ENST00000302251 LRRCC1Q9C099 1032 aa14.56□□□□□ -0.08
PDGFD-201ENST00000302251 RAPGEF3O95398 923 aa14.56□□□□□ -0.08
PDGFD-201ENST00000302251 NFE2L2Q16236 605 aa14.56□□□□□ -0.08
PDGFD-201ENST00000302251 FILIP1Q7Z7B0 1213 aa14.56□□□□□ -0.08
PDGFD-201ENST00000302251 C17orf53Q8N3J3 647 aaPredicted RBP14.56□□□□□ -0.08
PDGFD-201ENST00000302251 EMILIN1Q9Y6C2 1016 aa14.56□□□□□ -0.08
PDGFD-201ENST00000302251 ZNF521Q96K83 1311 aa14.56□□□□□ -0.08
PDGFD-201ENST00000302251 ERICH4A6NGS2 130 aa14.56□□□□□ -0.08
PDGFD-201ENST00000302251 PPLO60437 1756 aa14.55□□□□□ -0.08
PDGFD-201ENST00000302251 UGGT1Q9NYU2 1555 aa14.55□□□□□ -0.08
PDGFD-201ENST00000302251 FSD2A1L4K1 749 aa14.55□□□□□ -0.08
PDGFD-201ENST00000302251 LRSAM1Q6UWE0 723 aa14.55□□□□□ -0.08
PDGFD-201ENST00000302251 TMX3Q96JJ7 454 aa14.55□□□□□ -0.08
PDGFD-201ENST00000302251 CCDC192P0DO97 292 aa14.55□□□□□ -0.08
PDGFD-201ENST00000302251 RPAP2Q8IXW5 612 aaPredicted RBP14.55□□□□□ -0.08
PDGFD-201ENST00000302251 PKP1Q13835 747 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 GIMAP6Q6P9H5 292 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 OTUD7AQ8TE49 926 aaPredicted RBP14.54□□□□□ -0.08
PDGFD-201ENST00000302251 C16orf45Q96MC5 204 aaPredicted RBP14.54□□□□□ -0.08
PDGFD-201ENST00000302251 TRERF1Q96PN7 1200 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 VIRMAQ69YN4 1812 aaKnown RBP14.54□□□□□ -0.08
PDGFD-201ENST00000302251 MAP3K4Q9Y6R4 1608 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 ALDH1L2Q3SY69 923 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 WAPLQ7Z5K2 1190 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 CKAP2LQ8IYA6 745 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 CCDC112Q8NEF3 446 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 DYNC1I1O14576 645 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 KDM4AO75164 1064 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 LARP1BQ659C4 914 aaKnown RBP14.54□□□□□ -0.08
PDGFD-201ENST00000302251 CCDC83Q8IWF9 413 aa14.54□□□□□ -0.08
PDGFD-201ENST00000302251 CD2BP2O95400 341 aaKnown RBP14.53□□□□□ -0.08
PDGFD-201ENST00000302251 TPM4P67936 248 aa14.53□□□□□ -0.08
PDGFD-201ENST00000302251 NRXN1Q9ULB1 1477 aa14.53□□□□□ -0.08
PDGFD-201ENST00000302251 SDF4Q9BRK5 362 aa14.53□□□□□ -0.08
PDGFD-201ENST00000302251 ERBB4Q15303 1308 aa14.53□□□□□ -0.08
PDGFD-201ENST00000302251 TTC22Q5TAA0 569 aa14.53□□□□□ -0.08
PDGFD-201ENST00000302251 TNMDQ9H2S6 317 aa14.53□□□□□ -0.08
PDGFD-201ENST00000302251 NOS1P29475 1434 aa14.52□□□□□ -0.08
PDGFD-201ENST00000302251 GNAI3P08754 354 aa14.52□□□□□ -0.08
PDGFD-201ENST00000302251 AIMP1Q12904 312 aaKnown RBP14.52□□□□□ -0.08
PDGFD-201ENST00000302251 KRT24Q2M2I5 525 aa14.52□□□□□ -0.08
PDGFD-201ENST00000302251 MBIPQ9NS73 344 aa14.52□□□□□ -0.08
PDGFD-201ENST00000302251 CGNQ9P2M7 1197 aaKnown RBP14.52□□□□□ -0.08
PDGFD-201ENST00000302251 ATP7AQ04656 1500 aa14.52□□□□□ -0.09
PDGFD-201ENST00000302251 ATAD2Q6PL18 1390 aa14.52□□□□□ -0.09
PDGFD-201ENST00000302251 RBM25P49756 843 aaKnown RBP14.52□□□□□ -0.09
PDGFD-201ENST00000302251 NOLC1Q14978 699 aaKnown RBP eCLIP14.52□□□□□ -0.09
PDGFD-201ENST00000302251 RTEL1-TNFRSF6BF6WH68 1400 aa14.52□□□□□ -0.09
PDGFD-201ENST00000302251 TULP1O00294 542 aaPredicted RBP14.51□□□□□ -0.09
PDGFD-201ENST00000302251 TXNDC2Q86VQ3 553 aa14.51□□□□□ -0.09
PDGFD-201ENST00000302251 JAKMIP1Q96N16 626 aaKnown RBP14.51□□□□□ -0.09
PDGFD-201ENST00000302251 KIF1BO60333 1816 aa14.51□□□□□ -0.09
PDGFD-201ENST00000302251 LETM1O95202 739 aaPredicted RBP14.51□□□□□ -0.09
PDGFD-201ENST00000302251 CNTROBQ8N137 903 aa14.51□□□□□ -0.09
PDGFD-201ENST00000302251 C8orf58Q8NAV2 365 aa14.51□□□□□ -0.09
PDGFD-201ENST00000302251 MEIS3Q99687 375 aa14.51□□□□□ -0.09
PDGFD-201ENST00000302251 TFIP11Q9UBB9 837 aaKnown RBP14.51□□□□□ -0.09
PDGFD-201ENST00000302251 PIK3C2GO75747 1445 aa14.5□□□□□ -0.09
PDGFD-201ENST00000302251 CASTP20810 708 aaKnown RBP14.5□□□□□ -0.09
PDGFD-201ENST00000302251 CLASRPQ8N2M8 674 aaKnown RBP14.5□□□□□ -0.09
PDGFD-201ENST00000302251 TEFQ10587 303 aa14.5□□□□□ -0.09
PDGFD-201ENST00000302251 FAM177A1Q8N128 213 aaPredicted RBP14.5□□□□□ -0.09
PDGFD-201ENST00000302251 EFCAB6Q5THR3 1501 aa14.5□□□□□ -0.09
PDGFD-201ENST00000302251 KDM5AP29375 1690 aaKnown RBP14.5□□□□□ -0.09
PDGFD-201ENST00000302251 MX1P20591 662 aa14.5□□□□□ -0.09
PDGFD-201ENST00000302251 CCDC73Q6ZRK6 1079 aa14.5□□□□□ -0.09
PDGFD-201ENST00000302251 USP48Q86UV5 1035 aa14.5□□□□□ -0.09
PDGFD-201ENST00000302251 SPG7Q9UQ90 795 aa14.5□□□□□ -0.09
PDGFD-201ENST00000302251 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms