RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 EIF5P55010 431 aaKnown RBP16.79■□□□□ 0.28
SPRED1-201ENST00000299084 ANKRD1Q15327 319 aa16.79■□□□□ 0.28
SPRED1-201ENST00000299084 STAC3Q96MF2 364 aa16.79■□□□□ 0.28
SPRED1-201ENST00000299084 TSG101Q99816 390 aa16.79■□□□□ 0.28
SPRED1-201ENST00000299084 PODXL2Q9NZ53 605 aa16.79■□□□□ 0.28
SPRED1-201ENST00000299084 RPGRQ92834 1020 aaKnown RBP16.79■□□□□ 0.28
SPRED1-201ENST00000299084 PKNOX2Q96KN3 472 aa16.79■□□□□ 0.28
SPRED1-201ENST00000299084 ERICH4A6NGS2 130 aa16.79■□□□□ 0.28
SPRED1-201ENST00000299084 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
SPRED1-201ENST00000299084 CBFA2T2O43439 604 aa16.78■□□□□ 0.28
SPRED1-201ENST00000299084 VPS36Q86VN1 386 aa16.78■□□□□ 0.28
SPRED1-201ENST00000299084 SH3BP5O60239 455 aa16.78■□□□□ 0.28
SPRED1-201ENST00000299084 MYL6BP14649 208 aa16.78■□□□□ 0.28
SPRED1-201ENST00000299084 UTP14AQ9BVJ6 771 aaKnown RBP16.78■□□□□ 0.28
SPRED1-201ENST00000299084 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
SPRED1-201ENST00000299084 UBA5Q9GZZ9 404 aa16.78■□□□□ 0.28
SPRED1-201ENST00000299084 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
SPRED1-201ENST00000299084 GNAI3P08754 354 aa16.77■□□□□ 0.28
SPRED1-201ENST00000299084 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
SPRED1-201ENST00000299084 GOPCQ9HD26 462 aa16.77■□□□□ 0.28
SPRED1-201ENST00000299084 CEP131Q9UPN4 1083 aa16.77■□□□□ 0.28
SPRED1-201ENST00000299084 PDE4AP27815 886 aa16.77■□□□□ 0.28
SPRED1-201ENST00000299084 ME1P48163 572 aa16.77■□□□□ 0.28
SPRED1-201ENST00000299084 MACROD2A1Z1Q3 448 aa16.77■□□□□ 0.28
SPRED1-201ENST00000299084 TAF12Q16514 161 aa16.77■□□□□ 0.28
SPRED1-201ENST00000299084 SREK1Q8WXA9 508 aaKnown RBP16.77■□□□□ 0.28
SPRED1-201ENST00000299084 CCDC96Q2M329 555 aa16.77■□□□□ 0.27
SPRED1-201ENST00000299084 CAVIN4Q5BKX8 364 aa16.77■□□□□ 0.27
SPRED1-201ENST00000299084 SLF2Q8IX21 1173 aa16.77■□□□□ 0.27
SPRED1-201ENST00000299084 MYO1BO43795 1136 aa16.76■□□□□ 0.27
SPRED1-201ENST00000299084 WASF1Q92558 559 aa16.76■□□□□ 0.27
SPRED1-201ENST00000299084 BIRC2Q13490 618 aa16.76■□□□□ 0.27
SPRED1-201ENST00000299084 CCDC102AQ96A19 550 aa16.76■□□□□ 0.27
SPRED1-201ENST00000299084 STARD3NLO95772 234 aa16.75■□□□□ 0.27
SPRED1-201ENST00000299084 GCOM1H8Y6P7 765 aaPredicted RBP16.75■□□□□ 0.27
SPRED1-201ENST00000299084 MYZAPP0CAP1 466 aa16.75■□□□□ 0.27
SPRED1-201ENST00000299084 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
SPRED1-201ENST00000299084 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
SPRED1-201ENST00000299084 MTHFSP49914 203 aa16.75■□□□□ 0.27
SPRED1-201ENST00000299084 BMS1Q14692 1282 aaKnown RBP16.75■□□□□ 0.27
SPRED1-201ENST00000299084 PRPF31Q8WWY3 499 aaKnown RBP16.75■□□□□ 0.27
SPRED1-201ENST00000299084 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
SPRED1-201ENST00000299084 SERPINA10Q9UK55 444 aa16.75■□□□□ 0.27
SPRED1-201ENST00000299084 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
SPRED1-201ENST00000299084 LNPKQ9C0E8 428 aa16.74■□□□□ 0.27
SPRED1-201ENST00000299084 CCDC175P0C221 793 aa16.74■□□□□ 0.27
SPRED1-201ENST00000299084 BIN2Q9UBW5 565 aaPredicted RBP16.74■□□□□ 0.27
SPRED1-201ENST00000299084 DZIP1Q86YF9 867 aaKnown RBP16.74■□□□□ 0.27
SPRED1-201ENST00000299084 SIL1Q9H173 461 aa16.74■□□□□ 0.27
SPRED1-201ENST00000299084 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
SPRED1-201ENST00000299084 CCDC117Q8IWD4 279 aaPredicted RBP16.74■□□□□ 0.27
SPRED1-201ENST00000299084 FGFR1OPO95684 399 aaKnown RBP16.74■□□□□ 0.27
SPRED1-201ENST00000299084 CETN1Q12798 172 aa16.73■□□□□ 0.27
SPRED1-201ENST00000299084 TIGD1Q96MW7 591 aa16.73■□□□□ 0.27
SPRED1-201ENST00000299084 ABCF2Q9UG63 623 aa16.73■□□□□ 0.27
SPRED1-201ENST00000299084 CCDC148Q8NFR7 591 aa16.73■□□□□ 0.27
SPRED1-201ENST00000299084 RAB34Q9BZG1 259 aa16.73■□□□□ 0.27
SPRED1-201ENST00000299084 STK3Q13188 491 aa16.73■□□□□ 0.27
SPRED1-201ENST00000299084 OTUD6BQ8N6M0 293 aa16.73■□□□□ 0.27
SPRED1-201ENST00000299084 CDC45O75419 566 aa16.72■□□□□ 0.27
SPRED1-201ENST00000299084 ODF2LQ9ULJ1 636 aa16.72■□□□□ 0.27
SPRED1-201ENST00000299084 PUF60Q9UHX1 559 aaKnown RBP16.72■□□□□ 0.27
SPRED1-201ENST00000299084 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
SPRED1-201ENST00000299084 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
SPRED1-201ENST00000299084 MCM2P49736 904 aa16.72■□□□□ 0.27
SPRED1-201ENST00000299084 IMMTQ16891 758 aaKnown RBP16.72■□□□□ 0.27
SPRED1-201ENST00000299084 CCDC178Q5BJE1 867 aa16.72■□□□□ 0.27
SPRED1-201ENST00000299084 BEGAINQ9BUH8 593 aa16.72■□□□□ 0.27
SPRED1-201ENST00000299084 TAOK3Q9H2K8 898 aa16.72■□□□□ 0.27
SPRED1-201ENST00000299084 RRBP1Q9P2E9 1410 aaKnown RBP16.71■□□□□ 0.27
SPRED1-201ENST00000299084 SPA17Q15506 151 aa16.71■□□□□ 0.27
SPRED1-201ENST00000299084 ATF7IPQ6VMQ6 1270 aa16.71■□□□□ 0.27
SPRED1-201ENST00000299084 CACNA2D4Q7Z3S7 1137 aa16.71■□□□□ 0.27
SPRED1-201ENST00000299084 RAB3GAP2Q9H2M9 1393 aa16.71■□□□□ 0.27
SPRED1-201ENST00000299084 CTNNA3Q9UI47 895 aa16.71■□□□□ 0.27
SPRED1-201ENST00000299084 TTC21AQ8NDW8 1320 aa16.71■□□□□ 0.27
SPRED1-201ENST00000299084 GNAI2P04899 355 aa16.71■□□□□ 0.26
SPRED1-201ENST00000299084 NCBP1Q09161 790 aaKnown RBP16.71■□□□□ 0.26
SPRED1-201ENST00000299084 TSPY26PQ9H489 355 aa16.71■□□□□ 0.26
SPRED1-201ENST00000299084 TMEM266Q2M3C6 531 aa16.7■□□□□ 0.26
SPRED1-201ENST00000299084 SAMM50Q9Y512 469 aa16.7■□□□□ 0.26
SPRED1-201ENST00000299084 FKBP15Q5T1M5 1219 aa16.7■□□□□ 0.26
SPRED1-201ENST00000299084 CAVIN1Q6NZI2 390 aaKnown RBP16.7■□□□□ 0.26
SPRED1-201ENST00000299084 CYP46A1Q9Y6A2 500 aa16.7■□□□□ 0.26
SPRED1-201ENST00000299084 ZNF444Q8N0Y2 327 aaPredicted RBP16.7■□□□□ 0.26
SPRED1-201ENST00000299084 SYNCQ9H7C4 482 aa16.7■□□□□ 0.26
SPRED1-201ENST00000299084 IFFO1Q0D2I5 559 aa16.7■□□□□ 0.26
SPRED1-201ENST00000299084 NOC2LQ9Y3T9 749 aaKnown RBP16.7■□□□□ 0.26
SPRED1-201ENST00000299084 NDC80O14777 642 aa16.7■□□□□ 0.26
SPRED1-201ENST00000299084 BAG4O95429 457 aaKnown RBP16.69■□□□□ 0.26
SPRED1-201ENST00000299084 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
SPRED1-201ENST00000299084 APAF1O14727 1248 aa16.69■□□□□ 0.26
SPRED1-201ENST00000299084 ACTN2P35609 894 aa16.69■□□□□ 0.26
SPRED1-201ENST00000299084 AEBP1Q8IUX7 1158 aa16.69■□□□□ 0.26
SPRED1-201ENST00000299084 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
SPRED1-201ENST00000299084 TXNDC2Q86VQ3 553 aa16.68■□□□□ 0.26
SPRED1-201ENST00000299084 PPP1R14CQ8TAE6 165 aa16.68■□□□□ 0.26
SPRED1-201ENST00000299084 ZNF428Q96B54 188 aa16.68■□□□□ 0.26
SPRED1-201ENST00000299084 BICD1Q96G01 975 aa16.68■□□□□ 0.26
SPRED1-201ENST00000299084 GPATCH11Q8N954 259 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms