RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 TTC12Q9H892 705 aaPredicted RBP18.14■□□□□ 0.49
SPIDR-201ENST00000297423 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.13■□□□□ 0.49
SPIDR-201ENST00000297423 AAMPQ13685 434 aa18.13■□□□□ 0.49
SPIDR-201ENST00000297423 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
SPIDR-201ENST00000297423 NEK4P51957 841 aa18.13■□□□□ 0.49
SPIDR-201ENST00000297423 BBXQ8WY36 941 aaPredicted RBP18.13■□□□□ 0.49
SPIDR-201ENST00000297423 FYB1O15117 783 aa18.13■□□□□ 0.49
SPIDR-201ENST00000297423 USP25Q9UHP3 1055 aa18.13■□□□□ 0.49
SPIDR-201ENST00000297423 DTNBO60941 627 aa18.12■□□□□ 0.49
SPIDR-201ENST00000297423 NGEFQ8N5V2 710 aa18.12■□□□□ 0.49
SPIDR-201ENST00000297423 NGDNQ8NEJ9 315 aaKnown RBP18.12■□□□□ 0.49
SPIDR-201ENST00000297423 PPP1R9BQ96SB3 815 aa18.12■□□□□ 0.49
SPIDR-201ENST00000297423 NOL7Q9UMY1 257 aaKnown RBP18.12■□□□□ 0.49
SPIDR-201ENST00000297423 DYNC1I1O14576 645 aa18.12■□□□□ 0.49
SPIDR-201ENST00000297423 SNX21Q969T3 373 aa18.12■□□□□ 0.49
SPIDR-201ENST00000297423 COG3Q96JB2 828 aa18.12■□□□□ 0.49
SPIDR-201ENST00000297423 MYOM1P52179 1685 aa18.11■□□□□ 0.49
SPIDR-201ENST00000297423 MTERF4Q7Z6M4 381 aaKnown RBP18.11■□□□□ 0.49
SPIDR-201ENST00000297423 C16orf71Q8IYS4 520 aaPredicted RBP18.11■□□□□ 0.49
SPIDR-201ENST00000297423 PPIP5K1Q6PFW1 1433 aa18.11■□□□□ 0.49
SPIDR-201ENST00000297423 DLC1Q96QB1 1528 aa18.1■□□□□ 0.49
SPIDR-201ENST00000297423 FAM135BQ49AJ0 1406 aa18.1■□□□□ 0.49
SPIDR-201ENST00000297423 SMARCA5O60264 1052 aaPredicted RBP18.1■□□□□ 0.49
SPIDR-201ENST00000297423 HMOX1P09601 288 aa18.1■□□□□ 0.49
SPIDR-201ENST00000297423 TSPY26PQ9H489 355 aa18.1■□□□□ 0.49
SPIDR-201ENST00000297423 ROBO2Q9HCK4 1378 aa18.1■□□□□ 0.49
SPIDR-201ENST00000297423 ZNF592Q92610 1267 aa18.09■□□□□ 0.49
SPIDR-201ENST00000297423 TRIM6-TRIM34B2RNG4 842 aa18.09■□□□□ 0.49
SPIDR-201ENST00000297423 NCKAP5LQ9HCH0 1330 aa18.09■□□□□ 0.49
SPIDR-201ENST00000297423 NUCB1Q02818 461 aa18.09■□□□□ 0.49
SPIDR-201ENST00000297423 CGNQ9P2M7 1197 aaKnown RBP18.09■□□□□ 0.49
SPIDR-201ENST00000297423 POLR3AO14802 1390 aaPredicted RBP18.09■□□□□ 0.49
SPIDR-201ENST00000297423 RBM25P49756 843 aaKnown RBP18.08■□□□□ 0.49
SPIDR-201ENST00000297423 RABEP1Q15276 862 aa18.08■□□□□ 0.49
SPIDR-201ENST00000297423 CCDC27Q2M243 656 aa18.08■□□□□ 0.49
SPIDR-201ENST00000297423 RILPL2Q969X0 211 aa18.08■□□□□ 0.48
SPIDR-201ENST00000297423 SYAP1Q96A49 352 aaPredicted RBP18.08■□□□□ 0.48
SPIDR-201ENST00000297423 ADAMTS13Q76LX8 1427 aa18.08■□□□□ 0.48
SPIDR-201ENST00000297423 C3P01024 1663 aa18.08■□□□□ 0.48
SPIDR-201ENST00000297423 UBR1Q8IWV7 1749 aa18.07■□□□□ 0.48
SPIDR-201ENST00000297423 SLC4A10Q6U841 1118 aa18.07■□□□□ 0.48
SPIDR-201ENST00000297423 SOX12O15370 315 aa18.07■□□□□ 0.48
SPIDR-201ENST00000297423 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.07■□□□□ 0.48
SPIDR-201ENST00000297423 HDAC1Q13547 482 aaPredicted RBP18.07■□□□□ 0.48
SPIDR-201ENST00000297423 LARP6Q9BRS8 491 aaKnown RBP18.07■□□□□ 0.48
SPIDR-201ENST00000297423 TMEM63CQ9P1W3 806 aa18.07■□□□□ 0.48
SPIDR-201ENST00000297423 PRDM4Q9UKN5 801 aa18.07■□□□□ 0.48
SPIDR-201ENST00000297423 NSFL1CQ9UNZ2 370 aaKnown RBP18.06■□□□□ 0.48
SPIDR-201ENST00000297423 DIAPH1O60610 1272 aaKnown RBP18.06■□□□□ 0.48
SPIDR-201ENST00000297423 LMBRD1Q9NUN5 540 aa18.06■□□□□ 0.48
SPIDR-201ENST00000297423 INSRP06213 1382 aa18.06■□□□□ 0.48
SPIDR-201ENST00000297423 BMP2KLQ5H9B9 411 aa18.06■□□□□ 0.48
SPIDR-201ENST00000297423 NME9Q86XW9 330 aa18.06■□□□□ 0.48
SPIDR-201ENST00000297423 VGLL3A8MV65 326 aa18.06■□□□□ 0.48
SPIDR-201ENST00000297423 FBLN1P23142 703 aa18.06■□□□□ 0.48
SPIDR-201ENST00000297423 TMPOP42166 694 aaKnown RBP18.06■□□□□ 0.48
SPIDR-201ENST00000297423 KIF3AQ9Y496 699 aa18.06■□□□□ 0.48
SPIDR-201ENST00000297423 KCNA6P17658 529 aa18.05■□□□□ 0.48
SPIDR-201ENST00000297423 SMAP1Q8IYB5 467 aaPredicted RBP18.05■□□□□ 0.48
SPIDR-201ENST00000297423 NPHP1O15259 732 aa18.05■□□□□ 0.48
SPIDR-201ENST00000297423 PDCL2Q8N4E4 241 aa18.05■□□□□ 0.48
SPIDR-201ENST00000297423 CCDC94Q9BW85 323 aaPredicted RBP18.05■□□□□ 0.48
SPIDR-201ENST00000297423 RIMS1Q86UR5 1692 aaKnown RBP18.04■□□□□ 0.48
SPIDR-201ENST00000297423 ANO2Q9NQ90 1003 aa18.04■□□□□ 0.48
SPIDR-201ENST00000297423 TSHZ3Q63HK5 1081 aa18.04■□□□□ 0.48
SPIDR-201ENST00000297423 GPT2Q8TD30 523 aa18.04■□□□□ 0.48
SPIDR-201ENST00000297423 TRERF1Q96PN7 1200 aa18.04■□□□□ 0.48
SPIDR-201ENST00000297423 UPF3BQ9BZI7 483 aaKnown RBP18.04■□□□□ 0.48
SPIDR-201ENST00000297423 INTS3Q68E01 1043 aaKnown RBP18.03■□□□□ 0.48
SPIDR-201ENST00000297423 LRSAM1Q6UWE0 723 aa18.03■□□□□ 0.48
SPIDR-201ENST00000297423 ZBTB40Q9NUA8 1239 aa18.03■□□□□ 0.48
SPIDR-201ENST00000297423 ACEP12821 1306 aa18.02■□□□□ 0.48
SPIDR-201ENST00000297423 TECPR2O15040 1411 aa18.02■□□□□ 0.47
SPIDR-201ENST00000297423 FIBPO43427 364 aa18.02■□□□□ 0.47
SPIDR-201ENST00000297423 OTUD7AQ8TE49 926 aaPredicted RBP18.02■□□□□ 0.47
SPIDR-201ENST00000297423 TAOK2Q9UL54 1235 aa18.02■□□□□ 0.47
SPIDR-201ENST00000297423 HCLS1P14317 486 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-201ENST00000297423 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.47
SPIDR-201ENST00000297423 RBM33Q96EV2 1170 aaKnown RBP18■□□□□ 0.47
SPIDR-201ENST00000297423 ZNF445P59923 1031 aa18■□□□□ 0.47
SPIDR-201ENST00000297423 PLCD3Q8N3E9 789 aa18■□□□□ 0.47
SPIDR-201ENST00000297423 ATP7BP35670 1465 aa18■□□□□ 0.47
SPIDR-201ENST00000297423 U2AF2P26368 475 aaKnown RBP eCLIP18■□□□□ 0.47
SPIDR-201ENST00000297423 GCC1Q96CN9 775 aa17.99■□□□□ 0.47
SPIDR-201ENST00000297423 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
SPIDR-201ENST00000297423 SLIT1O75093 1534 aa17.99■□□□□ 0.47
SPIDR-201ENST00000297423 PRR36Q9H6K5 1346 aa17.99■□□□□ 0.47
SPIDR-201ENST00000297423 ERICH4A6NGS2 130 aa17.99■□□□□ 0.47
SPIDR-201ENST00000297423 ZNF500O60304 480 aaPredicted RBP17.99■□□□□ 0.47
SPIDR-201ENST00000297423 ADCY5O95622 1261 aa17.99■□□□□ 0.47
SPIDR-201ENST00000297423 ARHGAP23Q9P227 1491 aa17.99■□□□□ 0.47
SPIDR-201ENST00000297423 EDC4Q6P2E9 1401 aaKnown RBP17.99■□□□□ 0.47
SPIDR-201ENST00000297423 IFT57Q9NWB7 429 aa17.98■□□□□ 0.47
SPIDR-201ENST00000297423 ZRANB1Q9UGI0 708 aa17.98■□□□□ 0.47
SPIDR-201ENST00000297423 MBD3O95983 291 aa17.98■□□□□ 0.47
SPIDR-201ENST00000297423 HMGN5P82970 282 aaKnown RBP17.98■□□□□ 0.47
SPIDR-201ENST00000297423 KIF2CQ99661 725 aa17.98■□□□□ 0.47
SPIDR-201ENST00000297423 CEP170BQ9Y4F5 1589 aaPredicted RBP17.98■□□□□ 0.47
SPIDR-201ENST00000297423 NRXN3Q9Y4C0 1643 aa17.98■□□□□ 0.47
SPIDR-201ENST00000297423 PHF14O94880 888 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms