RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 NBPF1Q3BBV0 1214 aa14.54□□□□□ -0.08
SNRK-201ENST00000296088 GTF2A1P52655 376 aaPredicted RBP14.54□□□□□ -0.08
SNRK-201ENST00000296088 FAM114A1Q8IWE2 563 aa14.54□□□□□ -0.08
SNRK-201ENST00000296088 EHBP1Q8NDI1 1231 aa14.54□□□□□ -0.08
SNRK-201ENST00000296088 BLOC1S2Q6QNY1 142 aa14.54□□□□□ -0.08
SNRK-201ENST00000296088 GSTTP1A0A1W2PQM5 241 aa14.53□□□□□ -0.08
SNRK-201ENST00000296088 GRIPAP1Q4V328 841 aa14.53□□□□□ -0.08
SNRK-201ENST00000296088 CCT4P50991 539 aaKnown RBP14.53□□□□□ -0.08
SNRK-201ENST00000296088 CCDC183Q5T5S1 534 aa14.53□□□□□ -0.08
SNRK-201ENST00000296088 AEBP2Q6ZN18 517 aaPredicted RBP14.53□□□□□ -0.08
SNRK-201ENST00000296088 ALS2CR12Q96Q35 445 aa14.53□□□□□ -0.08
SNRK-201ENST00000296088 URI1O94763 535 aaPredicted RBP14.53□□□□□ -0.08
SNRK-201ENST00000296088 CBX1P83916 185 aa14.53□□□□□ -0.08
SNRK-201ENST00000296088 SPECC1Q5M775 1068 aa14.53□□□□□ -0.08
SNRK-201ENST00000296088 WDR66Q8TBY9 1149 aa14.53□□□□□ -0.08
SNRK-201ENST00000296088 FERP16591 822 aa14.52□□□□□ -0.08
SNRK-201ENST00000296088 CEP112Q8N8E3 955 aa14.52□□□□□ -0.08
SNRK-201ENST00000296088 GAS2L2Q8NHY3 880 aa14.52□□□□□ -0.08
SNRK-201ENST00000296088 TSG101Q99816 390 aa14.52□□□□□ -0.08
SNRK-201ENST00000296088 CCDC113Q9H0I3 377 aa14.52□□□□□ -0.08
SNRK-201ENST00000296088 FSD2A1L4K1 749 aa14.52□□□□□ -0.09
SNRK-201ENST00000296088 IPO4Q8TEX9 1081 aaKnown RBP14.52□□□□□ -0.09
SNRK-201ENST00000296088 UBE2Q2Q8WVN8 375 aa14.52□□□□□ -0.09
SNRK-201ENST00000296088 ZNF428Q96B54 188 aa14.52□□□□□ -0.09
SNRK-201ENST00000296088 SCAPERQ9BY12 1400 aa14.52□□□□□ -0.09
SNRK-201ENST00000296088 FBF1Q8TES7 1133 aa14.52□□□□□ -0.09
SNRK-201ENST00000296088 UVSSAQ2YD98 709 aa14.51□□□□□ -0.09
SNRK-201ENST00000296088 PANK1Q8TE04 598 aa14.51□□□□□ -0.09
SNRK-201ENST00000296088 DDX23Q9BUQ8 820 aaKnown RBP14.51□□□□□ -0.09
SNRK-201ENST00000296088 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
SNRK-201ENST00000296088 YEATS4O95619 227 aa14.51□□□□□ -0.09
SNRK-201ENST00000296088 TOP1P11387 765 aaKnown RBP14.51□□□□□ -0.09
SNRK-201ENST00000296088 RAPGEF4Q8WZA2 1011 aa14.51□□□□□ -0.09
SNRK-201ENST00000296088 SREK1Q8WXA9 508 aaKnown RBP14.51□□□□□ -0.09
SNRK-201ENST00000296088 HMGB1P1B2RPK0 211 aaPredicted RBP14.5□□□□□ -0.09
SNRK-201ENST00000296088 KRT222Q8N1A0 295 aa14.5□□□□□ -0.09
SNRK-201ENST00000296088 GTF2F1P35269 517 aaKnown RBP eCLIP14.5□□□□□ -0.09
SNRK-201ENST00000296088 CEBPZQ03701 1054 aaKnown RBP14.5□□□□□ -0.09
SNRK-201ENST00000296088 CCDC97Q96F63 343 aaPredicted RBP14.5□□□□□ -0.09
SNRK-201ENST00000296088 PYM1Q9BRP8 204 aaKnown RBP14.5□□□□□ -0.09
SNRK-201ENST00000296088 PDRG1Q9NUG6 133 aa14.5□□□□□ -0.09
SNRK-201ENST00000296088 TNNT1P13805 278 aa14.49□□□□□ -0.09
SNRK-201ENST00000296088 SSR1P43307 286 aaKnown RBP14.49□□□□□ -0.09
SNRK-201ENST00000296088 STMN4Q9H169 189 aaPredicted RBP14.49□□□□□ -0.09
SNRK-201ENST00000296088 ZHX3Q9H4I2 956 aa14.49□□□□□ -0.09
SNRK-201ENST00000296088 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
SNRK-201ENST00000296088 IFI16Q16666 785 aaKnown RBP14.48□□□□□ -0.09
SNRK-201ENST00000296088 LARP1Q6PKG0 1096 aaKnown RBP14.48□□□□□ -0.09
SNRK-201ENST00000296088 PNISRQ8TF01 805 aaKnown RBP14.48□□□□□ -0.09
SNRK-201ENST00000296088 TUBBP07437 444 aa14.48□□□□□ -0.09
SNRK-201ENST00000296088 CKAP4Q07065 602 aaKnown RBP14.48□□□□□ -0.09
SNRK-201ENST00000296088 TTC39AQ5SRH9 613 aa14.48□□□□□ -0.09
SNRK-201ENST00000296088 GTPBP4Q9BZE4 634 aaKnown RBP14.48□□□□□ -0.09
SNRK-201ENST00000296088 SH2B1Q9NRF2 756 aaPredicted RBP14.48□□□□□ -0.09
SNRK-201ENST00000296088 FYB1O15117 783 aa14.48□□□□□ -0.09
SNRK-201ENST00000296088 TTC14Q96N46 770 aa14.48□□□□□ -0.09
SNRK-201ENST00000296088 DDX19AQ9NUU7 478 aaKnown RBP14.48□□□□□ -0.09
SNRK-201ENST00000296088 CACNA2D4Q7Z3S7 1137 aa14.47□□□□□ -0.09
SNRK-201ENST00000296088 FERMT1Q9BQL6 677 aa14.47□□□□□ -0.09
SNRK-201ENST00000296088 IRX3P78415 501 aaPredicted RBP14.47□□□□□ -0.09
SNRK-201ENST00000296088 CCDC171Q6TFL3 1326 aa14.47□□□□□ -0.09
SNRK-201ENST00000296088 GOLIM4O00461 696 aa14.47□□□□□ -0.09
SNRK-201ENST00000296088 CCDC150Q8NCX0 1101 aa14.47□□□□□ -0.09
SNRK-201ENST00000296088 KIF4AO95239 1232 aa14.47□□□□□ -0.09
SNRK-201ENST00000296088 CCDC6Q16204 474 aa14.47□□□□□ -0.09
SNRK-201ENST00000296088 CCDC155Q8N6L0 562 aa14.47□□□□□ -0.09
SNRK-201ENST00000296088 SRRTQ9BXP5 876 aaKnown RBP14.47□□□□□ -0.09
SNRK-201ENST00000296088 HOMER2Q9NSB8 354 aa14.47□□□□□ -0.09
SNRK-201ENST00000296088 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
SNRK-201ENST00000296088 TSNARE1Q96NA8 513 aa14.46□□□□□ -0.09
SNRK-201ENST00000296088 NOL3O60936 208 aaKnown RBP14.46□□□□□ -0.09
SNRK-201ENST00000296088 RAB34Q9BZG1 259 aa14.46□□□□□ -0.09
SNRK-201ENST00000296088 PLVAPQ9BX97 442 aa14.46□□□□□ -0.09
SNRK-201ENST00000296088 CLIP2Q9UDT6 1046 aa14.46□□□□□ -0.09
SNRK-201ENST00000296088 HSF2BPO75031 334 aa14.46□□□□□ -0.1
SNRK-201ENST00000296088 UBE4AQ14139 1066 aa14.46□□□□□ -0.1
SNRK-201ENST00000296088 CCDC178Q5BJE1 867 aa14.46□□□□□ -0.1
SNRK-201ENST00000296088 RAPGEF2Q9Y4G8 1499 aa14.46□□□□□ -0.1
SNRK-201ENST00000296088 OPA1O60313 960 aa14.45□□□□□ -0.1
SNRK-201ENST00000296088 CEP83Q9Y592 693 aa14.45□□□□□ -0.1
SNRK-201ENST00000296088 LMAN1P49257 510 aa14.45□□□□□ -0.1
SNRK-201ENST00000296088 CCDC196A0A1B0GTZ2 297 aa14.45□□□□□ -0.1
SNRK-201ENST00000296088 CETN1Q12798 172 aa14.45□□□□□ -0.1
SNRK-201ENST00000296088 UBAC1Q9BSL1 405 aa14.45□□□□□ -0.1
SNRK-201ENST00000296088 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
SNRK-201ENST00000296088 ANKS4BQ8N8V4 417 aa14.45□□□□□ -0.1
SNRK-201ENST00000296088 HMGB1P09429 215 aaKnown RBP14.44□□□□□ -0.1
SNRK-201ENST00000296088 HMGB2P26583 209 aaKnown RBP14.44□□□□□ -0.1
SNRK-201ENST00000296088 RPAP2Q8IXW5 612 aaPredicted RBP14.44□□□□□ -0.1
SNRK-201ENST00000296088 TNIP1Q15025 636 aa14.44□□□□□ -0.1
SNRK-201ENST00000296088 PPP4R3BQ5MIZ7 849 aa14.44□□□□□ -0.1
SNRK-201ENST00000296088 ZNF287Q9HBT7 754 aa14.44□□□□□ -0.1
SNRK-201ENST00000296088 GOPCQ9HD26 462 aa14.44□□□□□ -0.1
SNRK-201ENST00000296088 KIF3CO14782 793 aa14.44□□□□□ -0.1
SNRK-201ENST00000296088 KIF6Q6ZMV9 814 aa14.44□□□□□ -0.1
SNRK-201ENST00000296088 WDR63Q8IWG1 891 aa14.44□□□□□ -0.1
SNRK-201ENST00000296088 NECTIN2Q92692 538 aa14.44□□□□□ -0.1
SNRK-201ENST00000296088 SYCE3A1L190 88 aa14.43□□□□□ -0.1
SNRK-201ENST00000296088 HLTFQ14527 1009 aaKnown RBP eCLIP14.43□□□□□ -0.1
SNRK-201ENST00000296088 CCDC77Q9BR77 488 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms