RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 IGSF3O75054 1194 aa12.46□□□□□ -0.42
LMX1A-201ENST00000294816 HMGN5P82970 282 aaKnown RBP12.46□□□□□ -0.42
LMX1A-201ENST00000294816 RILPL2Q969X0 211 aa12.46□□□□□ -0.42
LMX1A-201ENST00000294816 KIF3AQ9Y496 699 aa12.46□□□□□ -0.42
LMX1A-201ENST00000294816 TRIM6-TRIM34B2RNG4 842 aa12.45□□□□□ -0.42
LMX1A-201ENST00000294816 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
LMX1A-201ENST00000294816 MCCP23508 829 aa12.45□□□□□ -0.42
LMX1A-201ENST00000294816 DMTNQ08495 405 aa12.45□□□□□ -0.42
LMX1A-201ENST00000294816 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
LMX1A-201ENST00000294816 SLC4A10Q6U841 1118 aa12.45□□□□□ -0.42
LMX1A-201ENST00000294816 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
LMX1A-201ENST00000294816 USP48Q86UV5 1035 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 ZNF710Q8N1W2 664 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 IFT57Q9NWB7 429 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 PTCH1Q13635 1447 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 BRD1O95696 1058 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
LMX1A-201ENST00000294816 PIBF1Q8WXW3 757 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 PRIMPOLQ96LW4 560 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 MROH2AA6NES4 1674 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 CEP85Q6P2H3 762 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 SPC24Q8NBT2 197 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 MEIS3Q99687 375 aa12.44□□□□□ -0.42
LMX1A-201ENST00000294816 MYO3AQ8NEV4 1616 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
LMX1A-201ENST00000294816 ZSCAN20P17040 1043 aaPredicted RBP12.43□□□□□ -0.42
LMX1A-201ENST00000294816 CHAF1AQ13111 956 aaPredicted RBP12.43□□□□□ -0.42
LMX1A-201ENST00000294816 PRAM1Q96QH2 718 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 ARHGAP31Q2M1Z3 1444 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.43□□□□□ -0.42
LMX1A-201ENST00000294816 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
LMX1A-201ENST00000294816 PALD1Q9ULE6 856 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 EMILIN1Q9Y6C2 1016 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 RIMBP3CA6NJZ7 1639 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 RIMBP3BA6NNM3 1639 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 RIMBP3Q9UFD9 1639 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 ATP7AQ04656 1500 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 TULP4Q9NRJ4 1543 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
LMX1A-201ENST00000294816 RPAP2Q8IXW5 612 aaPredicted RBP12.42□□□□□ -0.42
LMX1A-201ENST00000294816 PDCL2Q8N4E4 241 aa12.42□□□□□ -0.42
LMX1A-201ENST00000294816 PIK3R4Q99570 1358 aa12.42□□□□□ -0.42
LMX1A-201ENST00000294816 DTNBO60941 627 aa12.42□□□□□ -0.42
LMX1A-201ENST00000294816 LARP6Q9BRS8 491 aaKnown RBP12.42□□□□□ -0.42
LMX1A-201ENST00000294816 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
LMX1A-201ENST00000294816 EXOC6BQ9Y2D4 811 aa12.42□□□□□ -0.42
LMX1A-201ENST00000294816 COL3A1P02461 1466 aaPredicted RBP12.42□□□□□ -0.42
LMX1A-201ENST00000294816 FIBPO43427 364 aa12.41□□□□□ -0.42
LMX1A-201ENST00000294816 POLKQ9UBT6 870 aa12.41□□□□□ -0.42
LMX1A-201ENST00000294816 ERCC6L2Q5T890 1561 aa12.41□□□□□ -0.42
LMX1A-201ENST00000294816 NRXN1Q9ULB1 1477 aa12.41□□□□□ -0.42
LMX1A-201ENST00000294816 MCM2P49736 904 aa12.41□□□□□ -0.42
LMX1A-201ENST00000294816 CNPY2Q9Y2B0 182 aa12.41□□□□□ -0.42
LMX1A-201ENST00000294816 FAM184AQ8NB25 1140 aa12.4□□□□□ -0.42
LMX1A-201ENST00000294816 LRRC7Q96NW7 1537 aa12.4□□□□□ -0.42
LMX1A-201ENST00000294816 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
LMX1A-201ENST00000294816 HMMRO75330 724 aa12.4□□□□□ -0.42
LMX1A-201ENST00000294816 PDE1AP54750 535 aa12.4□□□□□ -0.42
LMX1A-201ENST00000294816 PUS7Q96PZ0 661 aaKnown RBP12.4□□□□□ -0.42
LMX1A-201ENST00000294816 U2AF2P26368 475 aaKnown RBP eCLIP12.39□□□□□ -0.43
LMX1A-201ENST00000294816 CCDC183Q5T5S1 534 aa12.39□□□□□ -0.43
LMX1A-201ENST00000294816 UTP14CQ5TAP6 766 aaKnown RBP12.39□□□□□ -0.43
LMX1A-201ENST00000294816 SETBP1Q9Y6X0 1596 aa12.39□□□□□ -0.43
LMX1A-201ENST00000294816 WDR33Q9C0J8 1336 aaKnown RBP12.39□□□□□ -0.43
LMX1A-201ENST00000294816 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
LMX1A-201ENST00000294816 GIMAP6Q6P9H5 292 aa12.39□□□□□ -0.43
LMX1A-201ENST00000294816 CDK19Q9BWU1 502 aa12.39□□□□□ -0.43
LMX1A-201ENST00000294816 CHMP3Q9Y3E7 222 aa12.39□□□□□ -0.43
LMX1A-201ENST00000294816 MSH6P52701 1360 aa12.39□□□□□ -0.43
LMX1A-201ENST00000294816 ADGRB1O14514 1584 aa12.39□□□□□ -0.43
LMX1A-201ENST00000294816 ESYT1Q9BSJ8 1104 aa12.39□□□□□ -0.43
LMX1A-201ENST00000294816 FANCAO15360 1455 aa12.39□□□□□ -0.43
LMX1A-201ENST00000294816 UVSSAQ2YD98 709 aa12.38□□□□□ -0.43
LMX1A-201ENST00000294816 RPGRIP1LQ68CZ1 1315 aa12.38□□□□□ -0.43
LMX1A-201ENST00000294816 F6X3S4 739 aa12.38□□□□□ -0.43
LMX1A-201ENST00000294816 RIOK3O14730 519 aaKnown RBP12.38□□□□□ -0.43
LMX1A-201ENST00000294816 DEPDC5O75140 1603 aa12.38□□□□□ -0.43
LMX1A-201ENST00000294816 EFCAB6Q5THR3 1501 aa12.38□□□□□ -0.43
LMX1A-201ENST00000294816 FAM135BQ49AJ0 1406 aa12.38□□□□□ -0.43
LMX1A-201ENST00000294816 SRCIN1Q9C0H9 1055 aa12.38□□□□□ -0.43
LMX1A-201ENST00000294816 DIAPH3Q9NSV4 1193 aa12.38□□□□□ -0.43
LMX1A-201ENST00000294816 RRS1Q15050 365 aaKnown RBP12.37□□□□□ -0.43
LMX1A-201ENST00000294816 ZNF771Q7L3S4 317 aaPredicted RBP12.37□□□□□ -0.43
LMX1A-201ENST00000294816 PYCARDQ9ULZ3 195 aa12.37□□□□□ -0.43
LMX1A-201ENST00000294816 PPRC1Q5VV67 1664 aaKnown RBP12.37□□□□□ -0.43
LMX1A-201ENST00000294816 ZNF853P0CG23 659 aa12.37□□□□□ -0.43
LMX1A-201ENST00000294816 FKBP5Q13451 457 aaPredicted RBP12.37□□□□□ -0.43
LMX1A-201ENST00000294816 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
LMX1A-201ENST00000294816 ADGRB3O60242 1522 aa12.37□□□□□ -0.43
LMX1A-201ENST00000294816 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 CUL4AQ13619 759 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 GTPBP4Q9BZE4 634 aaKnown RBP12.36□□□□□ -0.43
LMX1A-201ENST00000294816 RTL1A6NKG5 1358 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 GLI2P10070 1586 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 KDM4AO75164 1064 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
LMX1A-201ENST00000294816 MX1P20591 662 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 DRC7Q8IY82 874 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 ZC3H13Q5T200 1668 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms