RNA–Protein interactions for RNA: ENST00000294635.4

LRRC53-201, Transcript of leucine rich repeat containing 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC53, Length 3,859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53-201ENST00000294635 PCDH11YQ9BZA8 1340 aa6.79□□□□□ -1.32
LRRC53-201ENST00000294635 ZBTB7CA1YPR0 619 aa6.78□□□□□ -1.32
LRRC53-201ENST00000294635 NKX1-1Q15270 411 aaPredicted RBP6.78□□□□□ -1.32
LRRC53-201ENST00000294635 CICQ96RK0 1608 aaPredicted RBP6.78□□□□□ -1.32
LRRC53-201ENST00000294635 SBF2Q86WG5 1849 aa6.78□□□□□ -1.32
LRRC53-201ENST00000294635 FBLN1P23142 703 aa6.78□□□□□ -1.32
LRRC53-201ENST00000294635 TNNT2P45379 298 aaPredicted RBP6.78□□□□□ -1.32
LRRC53-201ENST00000294635 CCDC125Q86Z20 511 aa6.78□□□□□ -1.32
LRRC53-201ENST00000294635 SEPT12Q8IYM1 358 aa6.78□□□□□ -1.32
LRRC53-201ENST00000294635 RAPGEF4Q8WZA2 1011 aa6.78□□□□□ -1.32
LRRC53-201ENST00000294635 SPG7Q9UQ90 795 aa6.78□□□□□ -1.32
LRRC53-201ENST00000294635 TNS1Q9HBL0 1735 aaKnown RBP6.78□□□□□ -1.32
LRRC53-201ENST00000294635 PPM1GO15355 546 aaPredicted RBP6.77□□□□□ -1.33
LRRC53-201ENST00000294635 HSP90AB1P08238 724 aaKnown RBP6.77□□□□□ -1.33
LRRC53-201ENST00000294635 HMGB2P26583 209 aaKnown RBP6.77□□□□□ -1.33
LRRC53-201ENST00000294635 PLEKHO1Q53GL0 409 aaPredicted RBP6.77□□□□□ -1.33
LRRC53-201ENST00000294635 CCDC9Q9Y3X0 531 aaKnown RBP6.77□□□□□ -1.33
LRRC53-201ENST00000294635 SCN11AQ9UI33 1791 aa6.77□□□□□ -1.33
LRRC53-201ENST00000294635 EXOC5O00471 708 aa6.77□□□□□ -1.33
LRRC53-201ENST00000294635 HTATSF1O43719 755 aaKnown RBP6.77□□□□□ -1.33
LRRC53-201ENST00000294635 DDB1Q16531 1140 aa6.77□□□□□ -1.33
LRRC53-201ENST00000294635 ZCRB1Q8TBF4 217 aaKnown RBP6.77□□□□□ -1.33
LRRC53-201ENST00000294635 RSPH6AQ9H0K4 717 aa6.77□□□□□ -1.33
LRRC53-201ENST00000294635 FAM98CQ17RN3 349 aaKnown RBP6.76□□□□□ -1.33
LRRC53-201ENST00000294635 KRT27Q7Z3Y8 459 aa6.76□□□□□ -1.33
LRRC53-201ENST00000294635 NGEFQ8N5V2 710 aa6.76□□□□□ -1.33
LRRC53-201ENST00000294635 PAPPAQ13219 1627 aa6.76□□□□□ -1.33
LRRC53-201ENST00000294635 PLEKHG5O94827 1062 aa6.76□□□□□ -1.33
LRRC53-201ENST00000294635 FAM196AQ6ZSG2 479 aa6.76□□□□□ -1.33
LRRC53-201ENST00000294635 SIPA1L3O60292 1781 aaPredicted RBP6.76□□□□□ -1.33
LRRC53-201ENST00000294635 DOT1LQ8TEK3 1739 aa6.76□□□□□ -1.33
LRRC53-201ENST00000294635 CCDC184Q52MB2 194 aa6.76□□□□□ -1.33
LRRC53-201ENST00000294635 LTV1Q96GA3 475 aaPredicted RBP6.76□□□□□ -1.33
LRRC53-201ENST00000294635 MRS2Q9HD23 443 aa6.76□□□□□ -1.33
LRRC53-201ENST00000294635 TOGARAM1Q9Y4F4 1720 aa6.76□□□□□ -1.33
LRRC53-201ENST00000294635 GAS2L2Q8NHY3 880 aa6.76□□□□□ -1.33
LRRC53-201ENST00000294635 SF3B2Q13435 895 aaKnown RBP6.75□□□□□ -1.33
LRRC53-201ENST00000294635 PLEKHF1Q96S99 279 aa6.75□□□□□ -1.33
LRRC53-201ENST00000294635 VIRMAQ69YN4 1812 aaKnown RBP6.75□□□□□ -1.33
LRRC53-201ENST00000294635 PDE3BQ13370 1112 aa6.75□□□□□ -1.33
LRRC53-201ENST00000294635 SULT6B1Q6IMI4 303 aa6.75□□□□□ -1.33
LRRC53-201ENST00000294635 AKAP4Q5JQC9 854 aa6.75□□□□□ -1.33
LRRC53-201ENST00000294635 IFNL2Q8IZJ0 200 aa6.75□□□□□ -1.33
LRRC53-201ENST00000294635 RREB1Q92766 1687 aa6.74□□□□□ -1.33
LRRC53-201ENST00000294635 WDR43Q15061 677 aaKnown RBP eCLIP6.74□□□□□ -1.33
LRRC53-201ENST00000294635 PNISRQ8TF01 805 aaKnown RBP6.74□□□□□ -1.33
LRRC53-201ENST00000294635 LY75O60449 1722 aa6.74□□□□□ -1.33
LRRC53-201ENST00000294635 ERVV-2B6SEH9 535 aa6.74□□□□□ -1.33
LRRC53-201ENST00000294635 PHKG2P15735 406 aa6.74□□□□□ -1.33
LRRC53-201ENST00000294635 MARCH10Q8NA82 808 aaPredicted RBP6.74□□□□□ -1.33
LRRC53-201ENST00000294635 DCAF5Q96JK2 942 aa6.74□□□□□ -1.33
LRRC53-201ENST00000294635 ITGB4P16144 1822 aa6.74□□□□□ -1.33
LRRC53-201ENST00000294635 MAP3K5Q99683 1374 aa6.73□□□□□ -1.33
LRRC53-201ENST00000294635 NEFMP07197 916 aa6.73□□□□□ -1.33
LRRC53-201ENST00000294635 U2AF1L5P0DN76 240 aaPredicted RBP6.73□□□□□ -1.33
LRRC53-201ENST00000294635 U2AF1Q01081 240 aaKnown RBP eCLIP6.73□□□□□ -1.33
LRRC53-201ENST00000294635 RUNDC1Q96C34 613 aa6.73□□□□□ -1.33
LRRC53-201ENST00000294635 LMOD3Q0VAK6 560 aa6.73□□□□□ -1.33
LRRC53-201ENST00000294635 BCL11BQ9C0K0 894 aaPredicted RBP6.73□□□□□ -1.33
LRRC53-201ENST00000294635 BABAM1Q9NWV8 329 aa6.73□□□□□ -1.33
LRRC53-201ENST00000294635 CEMIPQ8WUJ3 1361 aa6.73□□□□□ -1.33
LRRC53-201ENST00000294635 UBR2Q8IWV8 1755 aa6.73□□□□□ -1.33
LRRC53-201ENST00000294635 U2SURPO15042 1029 aaKnown RBP6.73□□□□□ -1.33
LRRC53-201ENST00000294635 USHBP1Q8N6Y0 703 aa6.73□□□□□ -1.33
LRRC53-201ENST00000294635 DLG5Q8TDM6 1919 aa6.73□□□□□ -1.33
LRRC53-201ENST00000294635 BTAF1O14981 1849 aa6.72□□□□□ -1.33
LRRC53-201ENST00000294635 C1orf141Q5JVX7 400 aa6.72□□□□□ -1.33
LRRC53-201ENST00000294635 AEBP1Q8IUX7 1158 aa6.72□□□□□ -1.33
LRRC53-201ENST00000294635 QSER1Q2KHR3 1735 aa6.72□□□□□ -1.33
LRRC53-201ENST00000294635 CYP27B1O15528 508 aa6.72□□□□□ -1.33
LRRC53-201ENST00000294635 PRKAR2BP31323 418 aa6.72□□□□□ -1.33
LRRC53-201ENST00000294635 CCDC27Q2M243 656 aa6.72□□□□□ -1.33
LRRC53-201ENST00000294635 USP35Q9P2H5 1018 aa6.72□□□□□ -1.33
LRRC53-201ENST00000294635 KDM6AO15550 1401 aaPredicted RBP6.72□□□□□ -1.33
LRRC53-201ENST00000294635 NFE2L2Q16236 605 aa6.72□□□□□ -1.33
LRRC53-201ENST00000294635 C5P01031 1676 aa6.71□□□□□ -1.33
LRRC53-201ENST00000294635 ZNF530Q6P9A1 599 aaPredicted RBP6.71□□□□□ -1.33
LRRC53-201ENST00000294635 KDM3BQ7LBC6 1761 aa6.71□□□□□ -1.33
LRRC53-201ENST00000294635 MAPK8IP3Q9UPT6 1336 aa6.71□□□□□ -1.34
LRRC53-201ENST00000294635 GNAT3A8MTJ3 354 aa6.71□□□□□ -1.34
LRRC53-201ENST00000294635 FAM9BQ8IZU0 186 aa6.71□□□□□ -1.34
LRRC53-201ENST00000294635 PLSCR1O15162 318 aa6.71□□□□□ -1.34
LRRC53-201ENST00000294635 MTHFSDQ2M296 383 aaKnown RBP6.71□□□□□ -1.34
LRRC53-201ENST00000294635 HMOX1P09601 288 aa6.7□□□□□ -1.34
LRRC53-201ENST00000294635 SMARCC1Q92922 1105 aaPredicted RBP6.7□□□□□ -1.34
LRRC53-201ENST00000294635 ADAMTS8Q9UP79 889 aa6.7□□□□□ -1.34
LRRC53-201ENST00000294635 RNMTO43148 476 aaKnown RBP6.7□□□□□ -1.34
LRRC53-201ENST00000294635 CALD1Q05682 793 aaKnown RBP6.7□□□□□ -1.34
LRRC53-201ENST00000294635 ILDR2Q71H61 639 aa6.7□□□□□ -1.34
LRRC53-201ENST00000294635 NUP188Q5SRE5 1749 aa6.7□□□□□ -1.34
LRRC53-201ENST00000294635 YTHDC1Q96MU7 727 aaKnown RBP6.69□□□□□ -1.34
LRRC53-201ENST00000294635 PHACTR3Q96KR7 559 aa6.69□□□□□ -1.34
LRRC53-201ENST00000294635 IL16Q14005 1332 aa6.69□□□□□ -1.34
LRRC53-201ENST00000294635 SOCS7O14512 581 aa6.69□□□□□ -1.34
LRRC53-201ENST00000294635 SLC27A3Q5K4L6 730 aa6.69□□□□□ -1.34
LRRC53-201ENST00000294635 UPF1Q92900 1129 aaKnown RBP eCLIP6.69□□□□□ -1.34
LRRC53-201ENST00000294635 SLC52A2Q9HAB3 445 aa6.69□□□□□ -1.34
LRRC53-201ENST00000294635 COL5A3P25940 1745 aaPredicted RBP6.69□□□□□ -1.34
LRRC53-201ENST00000294635 LAMB4A4D0S4 1761 aa6.68□□□□□ -1.34
LRRC53-201ENST00000294635 TMPOP42166 694 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms