RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CDCA7Q9BWT1 371 aaPredicted RBP11.05□□□□□ -0.64
PTPDC1-201ENST00000288976 ATRNO75882 1429 aa11.05□□□□□ -0.64
PTPDC1-201ENST00000288976 TCP11L2Q8N4U5 519 aa11.05□□□□□ -0.64
PTPDC1-201ENST00000288976 TMPOP42166 694 aaKnown RBP11.05□□□□□ -0.64
PTPDC1-201ENST00000288976 WDR63Q8IWG1 891 aa11.05□□□□□ -0.64
PTPDC1-201ENST00000288976 BTG4Q9NY30 223 aa11.05□□□□□ -0.64
PTPDC1-201ENST00000288976 HMOX1P09601 288 aa11.04□□□□□ -0.64
PTPDC1-201ENST00000288976 AEBP1Q8IUX7 1158 aa11.04□□□□□ -0.64
PTPDC1-201ENST00000288976 CCDC146Q8IYE0 955 aa11.04□□□□□ -0.64
PTPDC1-201ENST00000288976 PAPPAQ13219 1627 aa11.04□□□□□ -0.64
PTPDC1-201ENST00000288976 CALD1Q05682 793 aaKnown RBP11.04□□□□□ -0.64
PTPDC1-201ENST00000288976 UNC5CLQ8IV45 518 aa11.04□□□□□ -0.64
PTPDC1-201ENST00000288976 MAP3K5Q99683 1374 aa11.04□□□□□ -0.64
PTPDC1-201ENST00000288976 KDM3BQ7LBC6 1761 aa11.04□□□□□ -0.64
PTPDC1-201ENST00000288976 TNS2Q63HR2 1409 aa11.04□□□□□ -0.64
PTPDC1-201ENST00000288976 CSB-PGBD3P0DP91 1061 aa11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 VPS72Q15906 364 aa11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 SPATA31A5Q5VU36 1347 aa11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 SPATA31A7Q8IWB4 1347 aa11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 APAF1O14727 1248 aa11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 PLEKHO1Q53GL0 409 aaPredicted RBP11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 BARGINQ6ZT62 677 aa11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 SPATA31A1Q5TZJ5 1347 aa11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 EVA1CP58658 441 aa11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 LTV1Q96GA3 475 aaPredicted RBP11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 GLI3P10071 1580 aa11.03□□□□□ -0.64
PTPDC1-201ENST00000288976 TATP17735 454 aaPredicted RBP11.02□□□□□ -0.64
PTPDC1-201ENST00000288976 TOM1L2Q6ZVM7 507 aa11.02□□□□□ -0.65
PTPDC1-201ENST00000288976 NLRP2Q9NX02 1062 aa11.02□□□□□ -0.65
PTPDC1-201ENST00000288976 SPG7Q9UQ90 795 aa11.02□□□□□ -0.65
PTPDC1-201ENST00000288976 RAPGEF4Q8WZA2 1011 aa11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 PHACTR3Q96KR7 559 aa11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 WWC1Q8IX03 1113 aa11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 IL2RBP14784 551 aa11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 AKAP4Q5JQC9 854 aa11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 LARP1Q6PKG0 1096 aaKnown RBP11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 BABAM1Q9NWV8 329 aa11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 TRIM35Q9UPQ4 493 aa11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 PCDH11XQ9BZA7 1347 aa11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 PCDH11YQ9BZA8 1340 aa11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 CEMIPQ8WUJ3 1361 aa11.01□□□□□ -0.65
PTPDC1-201ENST00000288976 ADAMTS2O95450 1211 aa11□□□□□ -0.65
PTPDC1-201ENST00000288976 MTHFSDQ2M296 383 aaKnown RBP11□□□□□ -0.65
PTPDC1-201ENST00000288976 TOGARAM1Q9Y4F4 1720 aa11□□□□□ -0.65
PTPDC1-201ENST00000288976 E9PSI1 815 aa11□□□□□ -0.65
PTPDC1-201ENST00000288976 RIPK4P57078 832 aa11□□□□□ -0.65
PTPDC1-201ENST00000288976 MEX3CQ5U5Q3 659 aaKnown RBP11□□□□□ -0.65
PTPDC1-201ENST00000288976 TRMT2AQ8IZ69 625 aaKnown RBP11□□□□□ -0.65
PTPDC1-201ENST00000288976 CICQ96RK0 1608 aaPredicted RBP10.99□□□□□ -0.65
PTPDC1-201ENST00000288976 GNAT3A8MTJ3 354 aa10.99□□□□□ -0.65
PTPDC1-201ENST00000288976 USHBP1Q8N6Y0 703 aa10.99□□□□□ -0.65
PTPDC1-201ENST00000288976 SENP3-EIF4A1A0A087X0R7 540 aa10.99□□□□□ -0.65
PTPDC1-201ENST00000288976 HSP90AB1P08238 724 aaKnown RBP10.99□□□□□ -0.65
PTPDC1-201ENST00000288976 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
PTPDC1-201ENST00000288976 NPHP1O15259 732 aa10.99□□□□□ -0.65
PTPDC1-201ENST00000288976 BCL9O00512 1426 aa10.99□□□□□ -0.65
PTPDC1-201ENST00000288976 UBR2Q8IWV8 1755 aa10.98□□□□□ -0.65
PTPDC1-201ENST00000288976 STRN4Q9NRL3 753 aa10.98□□□□□ -0.65
PTPDC1-201ENST00000288976 IFT57Q9NWB7 429 aa10.98□□□□□ -0.65
PTPDC1-201ENST00000288976 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
PTPDC1-201ENST00000288976 NGLY1Q96IV0 654 aa10.98□□□□□ -0.65
PTPDC1-201ENST00000288976 C8orf37Q96NL8 207 aa10.98□□□□□ -0.65
PTPDC1-201ENST00000288976 SLFN5Q08AF3 891 aa10.97□□□□□ -0.65
PTPDC1-201ENST00000288976 MYH16Q9H6N6 1097 aa10.97□□□□□ -0.65
PTPDC1-201ENST00000288976 USP21Q9UK80 565 aa10.97□□□□□ -0.65
PTPDC1-201ENST00000288976 AFF2P51816 1311 aa10.97□□□□□ -0.65
PTPDC1-201ENST00000288976 ZNF831Q5JPB2 1677 aa10.97□□□□□ -0.65
PTPDC1-201ENST00000288976 C1orf141Q5JVX7 400 aa10.97□□□□□ -0.65
PTPDC1-201ENST00000288976 DOT1LQ8TEK3 1739 aa10.97□□□□□ -0.65
PTPDC1-201ENST00000288976 KDM6AO15550 1401 aaPredicted RBP10.96□□□□□ -0.65
PTPDC1-201ENST00000288976 NHSQ6T4R5 1651 aa10.96□□□□□ -0.65
PTPDC1-201ENST00000288976 CT47B1P0C2W7 299 aaPredicted RBP10.96□□□□□ -0.65
PTPDC1-201ENST00000288976 ZNF853P0CG23 659 aa10.96□□□□□ -0.65
PTPDC1-201ENST00000288976 IFNL2Q8IZJ0 200 aa10.96□□□□□ -0.65
PTPDC1-201ENST00000288976 RTF1Q92541 710 aaKnown RBP10.96□□□□□ -0.65
PTPDC1-201ENST00000288976 TRPC5Q9UL62 973 aaPredicted RBP10.96□□□□□ -0.65
PTPDC1-201ENST00000288976 LAMB4A4D0S4 1761 aa10.96□□□□□ -0.66
PTPDC1-201ENST00000288976 PHKG2P15735 406 aa10.96□□□□□ -0.66
PTPDC1-201ENST00000288976 ZNF772Q68DY9 489 aaPredicted RBP10.96□□□□□ -0.66
PTPDC1-201ENST00000288976 SOS1Q07889 1333 aaPredicted RBP10.96□□□□□ -0.66
PTPDC1-201ENST00000288976 ZNF530Q6P9A1 599 aaPredicted RBP10.95□□□□□ -0.66
PTPDC1-201ENST00000288976 ZCRB1Q8TBF4 217 aaKnown RBP10.95□□□□□ -0.66
PTPDC1-201ENST00000288976 GNAI1P63096 354 aa10.95□□□□□ -0.66
PTPDC1-201ENST00000288976 ITGB4P16144 1822 aa10.95□□□□□ -0.66
PTPDC1-201ENST00000288976 RRP7AQ9Y3A4 280 aaKnown RBP10.95□□□□□ -0.66
PTPDC1-201ENST00000288976 DCAF5Q96JK2 942 aa10.95□□□□□ -0.66
PTPDC1-201ENST00000288976 CFAP44Q96MT7 982 aa10.94□□□□□ -0.66
PTPDC1-201ENST00000288976 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
PTPDC1-201ENST00000288976 RNMTO43148 476 aaKnown RBP10.93□□□□□ -0.66
PTPDC1-201ENST00000288976 DUSP27Q5VZP5 1158 aa10.93□□□□□ -0.66
PTPDC1-201ENST00000288976 ERVV-2B6SEH9 535 aa10.92□□□□□ -0.66
PTPDC1-201ENST00000288976 GJD4Q96KN9 370 aaPredicted RBP10.92□□□□□ -0.66
PTPDC1-201ENST00000288976 FANCIQ9NVI1 1328 aa10.92□□□□□ -0.66
PTPDC1-201ENST00000288976 CYP27B1O15528 508 aa10.92□□□□□ -0.66
PTPDC1-201ENST00000288976 CHL1O00533 1208 aa10.91□□□□□ -0.66
PTPDC1-201ENST00000288976 NEUROD2Q15784 382 aa10.91□□□□□ -0.66
PTPDC1-201ENST00000288976 ZNF428Q96B54 188 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms