RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 CCDC183Q5T5S1 534 aa9.85□□□□□ -0.83
CACNA1D-201ENST00000288139 EHBP1Q8NDI1 1231 aa9.85□□□□□ -0.83
CACNA1D-201ENST00000288139 SLC26A8Q96RN1 970 aa9.85□□□□□ -0.83
CACNA1D-201ENST00000288139 SF3B2Q13435 895 aaKnown RBP9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 CCDC171Q6TFL3 1326 aa9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 KDM5DQ9BY66 1539 aa9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 TOPBP1Q92547 1522 aa9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 FBXW7Q969H0 707 aa9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 PYM1Q9BRP8 204 aaKnown RBP9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 SSX2IPQ9Y2D8 614 aa9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 IKQ13123 557 aaPredicted RBP9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 MICALCLQ6ZW33 695 aa9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 PIK3C2GO75747 1445 aa9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 ARHGAP5Q13017 1502 aa9.84□□□□□ -0.83
CACNA1D-201ENST00000288139 MCTP1Q6DN14 999 aa9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 TDRD9Q8NDG6 1382 aaKnown RBP9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 TXLNAP40222 546 aa9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 CROCCQ5TZA2 2017 aa9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 ASXL1Q8IXJ9 1541 aa9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 SDF4Q9BRK5 362 aa9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 ARHGAP45Q92619 1136 aa9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 ANO2Q9NQ90 1003 aa9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 SOX12O15370 315 aa9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 SFPQP23246 707 aaKnown RBP eCLIP9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 SART3Q15020 963 aaKnown RBP9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 KCNH8Q96L42 1107 aa9.83□□□□□ -0.84
CACNA1D-201ENST00000288139 POTEJP0CG39 1038 aa9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 TCOF1Q13428 1488 aaKnown RBP9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 UGGT2Q9NYU1 1516 aa9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 SLC3A2P08195 630 aaKnown RBP9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 IFIT2P09913 472 aaKnown RBP9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 USP25Q9UHP3 1055 aa9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 SOS1Q07889 1333 aaPredicted RBP9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 UBXN4Q92575 508 aa9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 DDX19AQ9NUU7 478 aaKnown RBP9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 STIM1Q13586 685 aa9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 CCDC27Q2M243 656 aa9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 SMAP1Q8IYB5 467 aaPredicted RBP9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 CDK5RAP3Q96JB5 506 aa9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 PPP2R1AP30153 589 aa9.82□□□□□ -0.84
CACNA1D-201ENST00000288139 MAGI1Q96QZ7 1491 aaPredicted RBP9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 CETN2P41208 172 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 HSP90AB3PQ58FF7 597 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 TTLL5Q6EMB2 1281 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 TBC1D32Q96NH3 1257 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 PARD3Q8TEW0 1356 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 TMCO3Q6UWJ1 677 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 EID1Q9Y6B2 187 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 HDAC1Q13547 482 aaPredicted RBP9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 MAP3K11Q16584 847 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 TIGD1Q96MW7 591 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 PODXL2Q9NZ53 605 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 MYO1BO43795 1136 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 GABPB1Q06547 395 aaPredicted RBP9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 APBB1O00213 710 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 KRT222Q8N1A0 295 aa9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 PRPF31Q8WWY3 499 aaKnown RBP9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 SCAF11Q99590 1463 aaKnown RBP9.81□□□□□ -0.84
CACNA1D-201ENST00000288139 TUBB2AQ13885 445 aa9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 GAS2L2Q8NHY3 880 aa9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 TUBB2BQ9BVA1 445 aa9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 MAGEC2Q9UBF1 373 aaPredicted RBP9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 DNMT1P26358 1616 aaKnown RBP9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 IMMTQ16891 758 aaKnown RBP9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 CYP46A1Q9Y6A2 500 aa9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 NUMA1Q14980 2115 aa9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 FCHSD2O94868 740 aa9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 SH3BGRP55822 239 aaPredicted RBP9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 SOGA3Q5TF21 947 aa9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 RALYLQ86SE5 291 aaKnown RBP9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 G3BP1Q13283 466 aaKnown RBP eCLIP9.8□□□□□ -0.84
CACNA1D-201ENST00000288139 OPA1O60313 960 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 ATL3Q6DD88 541 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 WASF1Q92558 559 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 NOC2LQ9Y3T9 749 aaKnown RBP9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 TNMDQ9H2S6 317 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 SLFN5Q08AF3 891 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 BMS1Q14692 1282 aaKnown RBP9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 NFXL1Q6ZNB6 911 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 CCDC150Q8NCX0 1101 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 LRRC45Q96CN5 670 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 SLC52A1Q9NWF4 448 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 DDX12PQ92771 950 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 PHAXQ9H814 394 aaKnown RBP9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 RIPK4P57078 832 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 ZNF592Q92610 1267 aa9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 C9orf78Q9NZ63 289 aaPredicted RBP9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.79□□□□□ -0.84
CACNA1D-201ENST00000288139 RAB11FIP3O75154 756 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 TCP11L2Q8N4U5 519 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 RNF123Q5XPI4 1314 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 LRSAM1Q6UWE0 723 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 CHD1LQ86WJ1 897 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 COMMD10Q9Y6G5 202 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 FERP16591 822 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 PPP1R9BQ96SB3 815 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 CCDC94Q9BW85 323 aaPredicted RBP9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 FERMT1Q9BQL6 677 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 VPS37CA5D8V6 355 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms