RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 IP6K1Q92551 441 aa17.08■□□□□ 0.32
SPC25-201ENST00000282074 COL24A1Q17RW2 1714 aa17.08■□□□□ 0.32
SPC25-201ENST00000282074 SHANK3Q9BYB0 1731 aa17.08■□□□□ 0.32
SPC25-201ENST00000282074 CEP350Q5VT06 3117 aa17.08■□□□□ 0.32
SPC25-201ENST00000282074 GPBP1L1Q9HC44 474 aaPredicted RBP17.07■□□□□ 0.32
SPC25-201ENST00000282074 CCNL1Q9UK58 526 aaPredicted RBP17.07■□□□□ 0.32
SPC25-201ENST00000282074 GOLGB1Q14789 3259 aaKnown RBP17.07■□□□□ 0.32
SPC25-201ENST00000282074 ANKRD36BQ8N2N9 1353 aa17.07■□□□□ 0.32
SPC25-201ENST00000282074 LTV1Q96GA3 475 aaPredicted RBP17.05■□□□□ 0.32
SPC25-201ENST00000282074 MON2Q7Z3U7 1717 aa17.05■□□□□ 0.32
SPC25-201ENST00000282074 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
SPC25-201ENST00000282074 ATP10DQ9P241 1426 aa17.05■□□□□ 0.32
SPC25-201ENST00000282074 LTN1O94822 1766 aa17.04■□□□□ 0.32
SPC25-201ENST00000282074 COL23A1Q86Y22 540 aaPredicted RBP17.04■□□□□ 0.32
SPC25-201ENST00000282074 TERF2IPQ9NYB0 399 aa17.04■□□□□ 0.32
SPC25-201ENST00000282074 CD2APQ9Y5K6 639 aa17.04■□□□□ 0.32
SPC25-201ENST00000282074 HSPA6P17066 643 aa17.03■□□□□ 0.32
SPC25-201ENST00000282074 ZCRB1Q8TBF4 217 aaKnown RBP17.03■□□□□ 0.32
SPC25-201ENST00000282074 USP54Q70EL1 1684 aa17.03■□□□□ 0.32
SPC25-201ENST00000282074 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.32
SPC25-201ENST00000282074 FLAD1Q8NFF5 587 aa17.02■□□□□ 0.32
SPC25-201ENST00000282074 USP47Q96K76 1375 aa17.02■□□□□ 0.32
SPC25-201ENST00000282074 SLC12A5Q9H2X9 1139 aa17.02■□□□□ 0.32
SPC25-201ENST00000282074 MSL1Q68DK7 614 aa17.02■□□□□ 0.31
SPC25-201ENST00000282074 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
SPC25-201ENST00000282074 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
SPC25-201ENST00000282074 AMPHP49418 695 aa17■□□□□ 0.31
SPC25-201ENST00000282074 NSD2O96028 1365 aa16.99■□□□□ 0.31
SPC25-201ENST00000282074 ZNF526Q8TF50 670 aaPredicted RBP16.99■□□□□ 0.31
SPC25-201ENST00000282074 LY75O60449 1722 aa16.98■□□□□ 0.31
SPC25-201ENST00000282074 COG3Q96JB2 828 aa16.98■□□□□ 0.31
SPC25-201ENST00000282074 FAM208AQ9UK61 1670 aaKnown RBP16.98■□□□□ 0.31
SPC25-201ENST00000282074 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
SPC25-201ENST00000282074 HOXC9P31274 260 aa16.97■□□□□ 0.31
SPC25-201ENST00000282074 NEUROD1Q13562 356 aa16.97■□□□□ 0.31
SPC25-201ENST00000282074 PUS7Q96PZ0 661 aaKnown RBP16.97■□□□□ 0.31
SPC25-201ENST00000282074 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.31
SPC25-201ENST00000282074 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.31
SPC25-201ENST00000282074 CARD11Q9BXL7 1154 aa16.96■□□□□ 0.31
SPC25-201ENST00000282074 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.3
SPC25-201ENST00000282074 ADCY9O60503 1353 aa16.96■□□□□ 0.3
SPC25-201ENST00000282074 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
SPC25-201ENST00000282074 A0A1W2PP64 1363 aa16.95■□□□□ 0.3
SPC25-201ENST00000282074 TATP17735 454 aaPredicted RBP16.92■□□□□ 0.3
SPC25-201ENST00000282074 AK7Q96M32 723 aa16.92■□□□□ 0.3
SPC25-201ENST00000282074 MEGF6O75095 1541 aa16.92■□□□□ 0.3
SPC25-201ENST00000282074 NBPF6Q5VWK0 638 aa16.91■□□□□ 0.3
SPC25-201ENST00000282074 SMARCC1Q92922 1105 aaPredicted RBP16.91■□□□□ 0.3
SPC25-201ENST00000282074 NBPF4Q96M43 638 aa16.91■□□□□ 0.3
SPC25-201ENST00000282074 IGSF1Q8N6C5 1336 aa16.91■□□□□ 0.3
SPC25-201ENST00000282074 PALLDQ8WX93 1383 aa16.9■□□□□ 0.3
SPC25-201ENST00000282074 FBLN1P23142 703 aa16.89■□□□□ 0.3
SPC25-201ENST00000282074 APLP1P51693 650 aa16.89■□□□□ 0.3
SPC25-201ENST00000282074 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.3
SPC25-201ENST00000282074 PCDH11XQ9BZA7 1347 aa16.89■□□□□ 0.29
SPC25-201ENST00000282074 PCDH11YQ9BZA8 1340 aa16.89■□□□□ 0.29
SPC25-201ENST00000282074 RTL1A6NKG5 1358 aa16.89■□□□□ 0.29
SPC25-201ENST00000282074 KIF3CO14782 793 aa16.89■□□□□ 0.29
SPC25-201ENST00000282074 SMG6Q86US8 1419 aaKnown RBP16.88■□□□□ 0.29
SPC25-201ENST00000282074 C5P01031 1676 aa16.88■□□□□ 0.29
SPC25-201ENST00000282074 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
SPC25-201ENST00000282074 USHBP1Q8N6Y0 703 aa16.88■□□□□ 0.29
SPC25-201ENST00000282074 WWC3Q9ULE0 1092 aa16.88■□□□□ 0.29
SPC25-201ENST00000282074 NSD3Q9BZ95 1437 aa16.88■□□□□ 0.29
SPC25-201ENST00000282074 PHF14O94880 888 aa16.87■□□□□ 0.29
SPC25-201ENST00000282074 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.86■□□□□ 0.29
SPC25-201ENST00000282074 SSFA2P28290 1259 aa16.86■□□□□ 0.29
SPC25-201ENST00000282074 RRS1Q15050 365 aaKnown RBP16.86■□□□□ 0.29
SPC25-201ENST00000282074 TOMM70O94826 608 aa16.85■□□□□ 0.29
SPC25-201ENST00000282074 RGPD2P0DJD1 1756 aa16.84■□□□□ 0.29
SPC25-201ENST00000282074 TAF1LQ8IZX4 1826 aa16.82■□□□□ 0.28
SPC25-201ENST00000282074 CYP27B1O15528 508 aa16.82■□□□□ 0.28
SPC25-201ENST00000282074 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
SPC25-201ENST00000282074 PIGBQ92521 554 aa16.82■□□□□ 0.28
SPC25-201ENST00000282074 C4BP0C0L5 1744 aa16.82■□□□□ 0.28
SPC25-201ENST00000282074 FYB1O15117 783 aa16.81■□□□□ 0.28
SPC25-201ENST00000282074 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
SPC25-201ENST00000282074 DNAJC5GQ8N7S2 189 aa16.81■□□□□ 0.28
SPC25-201ENST00000282074 LOC102724428A0A0B4J2F2 783 aa16.8■□□□□ 0.28
SPC25-201ENST00000282074 SIK1P57059 783 aa16.8■□□□□ 0.28
SPC25-201ENST00000282074 TGFB2P61812 414 aa16.8■□□□□ 0.28
SPC25-201ENST00000282074 HSP90AB2PQ58FF8 381 aa16.8■□□□□ 0.28
SPC25-201ENST00000282074 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
SPC25-201ENST00000282074 GGNBP2Q9H3C7 697 aa16.8■□□□□ 0.28
SPC25-201ENST00000282074 INSRP06213 1382 aa16.8■□□□□ 0.28
SPC25-201ENST00000282074 GNPATO15228 680 aa16.78■□□□□ 0.28
SPC25-201ENST00000282074 MMP10P09238 476 aa16.78■□□□□ 0.28
SPC25-201ENST00000282074 DSG3P32926 999 aa16.78■□□□□ 0.28
SPC25-201ENST00000282074 NKX1-1Q15270 411 aaPredicted RBP16.78■□□□□ 0.28
SPC25-201ENST00000282074 TESK2Q96S53 571 aa16.78■□□□□ 0.28
SPC25-201ENST00000282074 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
SPC25-201ENST00000282074 FLT4P35916 1363 aa16.78■□□□□ 0.28
SPC25-201ENST00000282074 KIF24Q5T7B8 1368 aa16.78■□□□□ 0.28
SPC25-201ENST00000282074 ST20-MTHFSA0A0A6YYL1 179 aa16.77■□□□□ 0.28
SPC25-201ENST00000282074 ARHGAP27Q6ZUM4 889 aa16.77■□□□□ 0.28
SPC25-201ENST00000282074 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.28
SPC25-201ENST00000282074 BCS1LQ9Y276 419 aa16.77■□□□□ 0.28
SPC25-201ENST00000282074 UBR3Q6ZT12 1888 aa16.77■□□□□ 0.28
SPC25-201ENST00000282074 ATP6V1AP38606 617 aa16.77■□□□□ 0.27
SPC25-201ENST00000282074 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms