RNA–Protein interactions for RNA: ENST00000280780.6

FAM53B-201, Transcript of family with sequence similarity 53 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM53B, Length 1,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-201ENST00000280780 MEGF6O75095 1541 aa29.81■■■□□ 2.36
FAM53B-201ENST00000280780 ADAMTS8Q9UP79 889 aa29.8■■■□□ 2.36
FAM53B-201ENST00000280780 U2SURPO15042 1029 aaKnown RBP29.79■■■□□ 2.36
FAM53B-201ENST00000280780 WDR43Q15061 677 aaKnown RBP eCLIP29.78■■■□□ 2.36
FAM53B-201ENST00000280780 FAM196AQ6ZSG2 479 aa29.77■■■□□ 2.36
FAM53B-201ENST00000280780 NUDCQ9Y266 331 aa29.77■■■□□ 2.36
FAM53B-201ENST00000280780 IGSF1Q8N6C5 1336 aa29.76■■■□□ 2.36
FAM53B-201ENST00000280780 NCAPD2Q15021 1401 aa29.76■■■□□ 2.35
FAM53B-201ENST00000280780 TNS2Q63HR2 1409 aa29.76■■■□□ 2.35
FAM53B-201ENST00000280780 U2AF1L5P0DN76 240 aaPredicted RBP29.76■■■□□ 2.35
FAM53B-201ENST00000280780 U2AF1Q01081 240 aaKnown RBP eCLIP29.76■■■□□ 2.35
FAM53B-201ENST00000280780 TRIM37O94972 964 aa29.75■■■□□ 2.35
FAM53B-201ENST00000280780 PTF1AQ7RTS3 328 aa29.74■■■□□ 2.35
FAM53B-201ENST00000280780 AEBP1Q8IUX7 1158 aa29.74■■■□□ 2.35
FAM53B-201ENST00000280780 DEFB132Q7Z7B7 95 aa29.73■■■□□ 2.35
FAM53B-201ENST00000280780 SHANK3Q9BYB0 1731 aa29.72■■■□□ 2.35
FAM53B-201ENST00000280780 OVOS2A0A0G2JMS6 1433 aa29.72■■■□□ 2.35
FAM53B-201ENST00000280780 KDRP35968 1356 aa29.72■■■□□ 2.35
FAM53B-201ENST00000280780 HMOX1P09601 288 aa29.72■■■□□ 2.35
FAM53B-201ENST00000280780 CCDC125Q86Z20 511 aa29.72■■■□□ 2.35
FAM53B-201ENST00000280780 DDX54Q8TDD1 881 aaKnown RBP29.72■■■□□ 2.35
FAM53B-201ENST00000280780 ZCRB1Q8TBF4 217 aaKnown RBP29.71■■■□□ 2.35
FAM53B-201ENST00000280780 RAPGEF4Q8WZA2 1011 aa29.71■■■□□ 2.35
FAM53B-201ENST00000280780 SBF2Q86WG5 1849 aa29.7■■■□□ 2.35
FAM53B-201ENST00000280780 TATP17735 454 aaPredicted RBP29.69■■■□□ 2.34
FAM53B-201ENST00000280780 SULT6B1Q6IMI4 303 aa29.69■■■□□ 2.34
FAM53B-201ENST00000280780 RSPH6AQ9H0K4 717 aa29.69■■■□□ 2.34
FAM53B-201ENST00000280780 CCDC146Q8IYE0 955 aa29.67■■■□□ 2.34
FAM53B-201ENST00000280780 TNS1Q9HBL0 1735 aaKnown RBP29.67■■■□□ 2.34
FAM53B-201ENST00000280780 KCNQ2O43526 872 aa29.65■■■□□ 2.34
FAM53B-201ENST00000280780 PLEKHF1Q96S99 279 aa29.65■■■□□ 2.34
FAM53B-201ENST00000280780 FCHSD2O94868 740 aa29.64■■■□□ 2.34
FAM53B-201ENST00000280780 ACSBG1Q96GR2 724 aa29.64■■■□□ 2.34
FAM53B-201ENST00000280780 BCL9O00512 1426 aa29.64■■■□□ 2.34
FAM53B-201ENST00000280780 PRKAR2BP31323 418 aa29.63■■■□□ 2.33
FAM53B-201ENST00000280780 CYP27B1O15528 508 aa29.62■■■□□ 2.33
FAM53B-201ENST00000280780 EN1Q05925 392 aaPredicted RBP29.62■■■□□ 2.33
FAM53B-201ENST00000280780 SF3B2Q13435 895 aaKnown RBP29.62■■■□□ 2.33
FAM53B-201ENST00000280780 YTHDC1Q96MU7 727 aaKnown RBP29.62■■■□□ 2.33
FAM53B-201ENST00000280780 APBA3O96018 575 aa29.6■■■□□ 2.33
FAM53B-201ENST00000280780 KAT6BQ8WYB5 2073 aa29.6■■■□□ 2.33
FAM53B-201ENST00000280780 SENP3-EIF4A1A0A087X0R7 540 aa29.59■■■□□ 2.33
FAM53B-201ENST00000280780 PKD1L3Q7Z443 1732 aa29.59■■■□□ 2.33
FAM53B-201ENST00000280780 PHACTR3Q96KR7 559 aa29.59■■■□□ 2.33
FAM53B-201ENST00000280780 RUNDC1Q96C34 613 aa29.58■■■□□ 2.33
FAM53B-201ENST00000280780 BCL11BQ9C0K0 894 aaPredicted RBP29.58■■■□□ 2.33
FAM53B-201ENST00000280780 EZH2Q15910 746 aaKnown RBP29.56■■■□□ 2.32
FAM53B-201ENST00000280780 DLG5Q8TDM6 1919 aa29.56■■■□□ 2.32
FAM53B-201ENST00000280780 CENPBP07199 599 aaPredicted RBP29.56■■■□□ 2.32
FAM53B-201ENST00000280780 BAG6P46379 1132 aa29.55■■■□□ 2.32
FAM53B-201ENST00000280780 CAMKK2Q96RR4 588 aa29.55■■■□□ 2.32
FAM53B-201ENST00000280780 PCDH11XQ9BZA7 1347 aa29.54■■■□□ 2.32
FAM53B-201ENST00000280780 PCDH11YQ9BZA8 1340 aa29.54■■■□□ 2.32
FAM53B-201ENST00000280780 APAF1O14727 1248 aa29.53■■■□□ 2.32
FAM53B-201ENST00000280780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.53■■■□□ 2.32
FAM53B-201ENST00000280780 SPG7Q9UQ90 795 aa29.53■■■□□ 2.32
FAM53B-201ENST00000280780 PRIM1P49642 420 aaKnown RBP29.52■■■□□ 2.32
FAM53B-201ENST00000280780 PNNQ9H307 717 aaKnown RBP29.52■■■□□ 2.32
FAM53B-201ENST00000280780 NHSQ6T4R5 1651 aa29.52■■■□□ 2.32
FAM53B-201ENST00000280780 MAPK8IP3Q9UPT6 1336 aa29.51■■■□□ 2.31
FAM53B-201ENST00000280780 DOT1LQ8TEK3 1739 aa29.5■■■□□ 2.31
FAM53B-201ENST00000280780 PHKG2P15735 406 aa29.49■■■□□ 2.31
FAM53B-201ENST00000280780 HNRNPUQ00839 825 aaKnown RBP eCLIP29.48■■■□□ 2.31
FAM53B-201ENST00000280780 RRP7AQ9Y3A4 280 aaKnown RBP29.48■■■□□ 2.31
FAM53B-201ENST00000280780 NKX1-1Q15270 411 aaPredicted RBP29.47■■■□□ 2.31
FAM53B-201ENST00000280780 PROM2Q8N271 834 aa29.47■■■□□ 2.31
FAM53B-201ENST00000280780 MTHFSDQ2M296 383 aaKnown RBP29.47■■■□□ 2.31
FAM53B-201ENST00000280780 PLEKHO1Q53GL0 409 aaPredicted RBP29.47■■■□□ 2.31
FAM53B-201ENST00000280780 SYTL4Q96C24 671 aaPredicted RBP29.47■■■□□ 2.31
FAM53B-201ENST00000280780 TOGARAM1Q9Y4F4 1720 aa29.46■■■□□ 2.31
FAM53B-201ENST00000280780 BTAF1O14981 1849 aa29.46■■■□□ 2.31
FAM53B-201ENST00000280780 TMPOP42166 694 aaKnown RBP29.46■■■□□ 2.31
FAM53B-201ENST00000280780 IFNL2Q8IZJ0 200 aa29.46■■■□□ 2.31
FAM53B-201ENST00000280780 PLSCR1O15162 318 aa29.45■■■□□ 2.31
FAM53B-201ENST00000280780 PLEKHG2Q9H7P9 1386 aa29.45■■■□□ 2.3
FAM53B-201ENST00000280780 NFE2L2Q16236 605 aa29.44■■■□□ 2.3
FAM53B-201ENST00000280780 AMOTQ4VCS5 1084 aa29.43■■■□□ 2.3
FAM53B-201ENST00000280780 NEFMP07197 916 aa29.43■■■□□ 2.3
FAM53B-201ENST00000280780 ZNF530Q6P9A1 599 aaPredicted RBP29.43■■■□□ 2.3
FAM53B-201ENST00000280780 VIRMAQ69YN4 1812 aaKnown RBP29.43■■■□□ 2.3
FAM53B-201ENST00000280780 NEUROD2Q15784 382 aa29.42■■■□□ 2.3
FAM53B-201ENST00000280780 SALL2Q9Y467 1007 aaPredicted RBP29.42■■■□□ 2.3
FAM53B-201ENST00000280780 ITGB4P16144 1822 aa29.4■■■□□ 2.3
FAM53B-201ENST00000280780 SRCAPQ6ZRS2 3230 aa29.4■■■□□ 2.3
FAM53B-201ENST00000280780 RREB1Q92766 1687 aa29.39■■■□□ 2.29
FAM53B-201ENST00000280780 MPRIPQ6WCQ1 1025 aa29.39■■■□□ 2.29
FAM53B-201ENST00000280780 GAS2L2Q8NHY3 880 aa29.39■■■□□ 2.29
FAM53B-201ENST00000280780 RIPK4P57078 832 aa29.38■■■□□ 2.29
FAM53B-201ENST00000280780 TRIM35Q9UPQ4 493 aa29.38■■■□□ 2.29
FAM53B-201ENST00000280780 KDM6AO15550 1401 aaPredicted RBP29.36■■■□□ 2.29
FAM53B-201ENST00000280780 TXNRD1Q16881 649 aa29.36■■■□□ 2.29
FAM53B-201ENST00000280780 PIGBQ92521 554 aa29.36■■■□□ 2.29
FAM53B-201ENST00000280780 NUP188Q5SRE5 1749 aa29.35■■■□□ 2.29
FAM53B-201ENST00000280780 RGPD3A6NKT7 1758 aaPredicted RBP29.35■■■□□ 2.29
FAM53B-201ENST00000280780 RGPD4Q7Z3J3 1758 aa29.35■■■□□ 2.29
FAM53B-201ENST00000280780 ZBED9Q6R2W3 1325 aa29.34■■■□□ 2.29
FAM53B-201ENST00000280780 ZNF521Q96K83 1311 aa29.34■■■□□ 2.29
FAM53B-201ENST00000280780 ADAMTS7Q9UKP4 1686 aa29.34■■■□□ 2.29
FAM53B-201ENST00000280780 NCBP3Q53F19 620 aaKnown RBP29.34■■■□□ 2.29
FAM53B-201ENST00000280780 LGR6Q9HBX8 967 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms