RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 MCM10Q7L590 875 aa15.78■□□□□ 0.12
COL8A1-202ENST00000273342 EXOC6BQ9Y2D4 811 aa15.78■□□□□ 0.12
COL8A1-202ENST00000273342 MED14O60244 1454 aa15.78■□□□□ 0.12
COL8A1-202ENST00000273342 GLI2P10070 1586 aa15.77■□□□□ 0.12
COL8A1-202ENST00000273342 LRRC7Q96NW7 1537 aa15.77■□□□□ 0.12
COL8A1-202ENST00000273342 CEP85Q6P2H3 762 aa15.77■□□□□ 0.12
COL8A1-202ENST00000273342 RILPL2Q969X0 211 aa15.77■□□□□ 0.12
COL8A1-202ENST00000273342 CWC22Q9HCG8 908 aaKnown RBP15.77■□□□□ 0.12
COL8A1-202ENST00000273342 SETBP1Q9Y6X0 1596 aa15.77■□□□□ 0.12
COL8A1-202ENST00000273342 RPGRIP1LQ68CZ1 1315 aa15.77■□□□□ 0.11
COL8A1-202ENST00000273342 ZNF500O60304 480 aaPredicted RBP15.77■□□□□ 0.11
COL8A1-202ENST00000273342 GADD45BO75293 160 aaPredicted RBP15.77■□□□□ 0.11
COL8A1-202ENST00000273342 ZNF428Q96B54 188 aa15.77■□□□□ 0.11
COL8A1-202ENST00000273342 CFAP44Q96MT7 982 aa15.77■□□□□ 0.11
COL8A1-202ENST00000273342 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
COL8A1-202ENST00000273342 AEBP1Q8IUX7 1158 aa15.76■□□□□ 0.11
COL8A1-202ENST00000273342 PALD1Q9ULE6 856 aa15.76■□□□□ 0.11
COL8A1-202ENST00000273342 REC8O95072 547 aa15.76■□□□□ 0.11
COL8A1-202ENST00000273342 ANKRD44Q8N8A2 993 aa15.76■□□□□ 0.11
COL8A1-202ENST00000273342 IFT172Q9UG01 1749 aa15.76■□□□□ 0.11
COL8A1-202ENST00000273342 TRIM6-TRIM34B2RNG4 842 aa15.76■□□□□ 0.11
COL8A1-202ENST00000273342 ERC2O15083 957 aa15.76■□□□□ 0.11
COL8A1-202ENST00000273342 BRPF1P55201 1214 aaPredicted RBP15.76■□□□□ 0.11
COL8A1-202ENST00000273342 ANO2Q9NQ90 1003 aa15.76■□□□□ 0.11
COL8A1-202ENST00000273342 PTCH1Q13635 1447 aa15.75■□□□□ 0.11
COL8A1-202ENST00000273342 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
COL8A1-202ENST00000273342 NECTIN2Q92692 538 aa15.75■□□□□ 0.11
COL8A1-202ENST00000273342 CCDC39Q9UFE4 941 aa15.75■□□□□ 0.11
COL8A1-202ENST00000273342 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL8A1-202ENST00000273342 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
COL8A1-202ENST00000273342 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL8A1-202ENST00000273342 ZNF853P0CG23 659 aa15.74■□□□□ 0.11
COL8A1-202ENST00000273342 PUS7Q96PZ0 661 aaKnown RBP15.74■□□□□ 0.11
COL8A1-202ENST00000273342 ZHX1Q9UKY1 873 aaPredicted RBP15.74■□□□□ 0.11
COL8A1-202ENST00000273342 MSH6P52701 1360 aa15.74■□□□□ 0.11
COL8A1-202ENST00000273342 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
COL8A1-202ENST00000273342 TTC12Q9H892 705 aaPredicted RBP15.73■□□□□ 0.11
COL8A1-202ENST00000273342 USP25Q9UHP3 1055 aa15.73■□□□□ 0.11
COL8A1-202ENST00000273342 ZC3H13Q5T200 1668 aaKnown RBP15.73■□□□□ 0.11
COL8A1-202ENST00000273342 FAM135BQ49AJ0 1406 aa15.73■□□□□ 0.11
COL8A1-202ENST00000273342 IL13P35225 146 aa15.73■□□□□ 0.11
COL8A1-202ENST00000273342 TSPY26PQ9H489 355 aa15.73■□□□□ 0.11
COL8A1-202ENST00000273342 PNPLA6Q8IY17 1366 aa15.73■□□□□ 0.11
COL8A1-202ENST00000273342 HS1BP3Q53T59 392 aa15.73■□□□□ 0.11
COL8A1-202ENST00000273342 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
COL8A1-202ENST00000273342 USP32Q8NFA0 1604 aa15.72■□□□□ 0.11
COL8A1-202ENST00000273342 PIK3R4Q99570 1358 aa15.72■□□□□ 0.11
COL8A1-202ENST00000273342 MAP4K4O95819 1239 aaPredicted RBP15.72■□□□□ 0.11
COL8A1-202ENST00000273342 CD163L1Q9NR16 1453 aa15.71■□□□□ 0.11
COL8A1-202ENST00000273342 SULT6B1Q6IMI4 303 aa15.71■□□□□ 0.11
COL8A1-202ENST00000273342 G2E3Q7L622 706 aa15.71■□□□□ 0.11
COL8A1-202ENST00000273342 PDE1AP54750 535 aa15.71■□□□□ 0.11
COL8A1-202ENST00000273342 CSPP1Q1MSJ5 1256 aa15.7■□□□□ 0.1
COL8A1-202ENST00000273342 SASS6Q6UVJ0 657 aa15.7■□□□□ 0.1
COL8A1-202ENST00000273342 RPAP2Q8IXW5 612 aaPredicted RBP15.7■□□□□ 0.1
COL8A1-202ENST00000273342 PPLO60437 1756 aa15.7■□□□□ 0.1
COL8A1-202ENST00000273342 KIAA2012Q0VF49 1180 aa15.7■□□□□ 0.1
COL8A1-202ENST00000273342 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
COL8A1-202ENST00000273342 YTHDC2Q9H6S0 1430 aaKnown RBP15.7■□□□□ 0.1
COL8A1-202ENST00000273342 USP48Q86UV5 1035 aa15.69■□□□□ 0.1
COL8A1-202ENST00000273342 BCL11BQ9C0K0 894 aaPredicted RBP15.69■□□□□ 0.1
COL8A1-202ENST00000273342 PRDM4Q9UKN5 801 aa15.69■□□□□ 0.1
COL8A1-202ENST00000273342 RTL1A6NKG5 1358 aa15.68■□□□□ 0.1
COL8A1-202ENST00000273342 MBD3O95983 291 aa15.68■□□□□ 0.1
COL8A1-202ENST00000273342 NEURL4Q96JN8 1562 aa15.68■□□□□ 0.1
COL8A1-202ENST00000273342 ARHGEF28Q8N1W1 1705 aaKnown RBP15.68■□□□□ 0.1
COL8A1-202ENST00000273342 DYNC1I1O14576 645 aa15.68■□□□□ 0.1
COL8A1-202ENST00000273342 BRD1O95696 1058 aa15.68■□□□□ 0.1
COL8A1-202ENST00000273342 HCLS1P14317 486 aaPredicted RBP15.68■□□□□ 0.1
COL8A1-202ENST00000273342 TERF1P54274 439 aa15.68■□□□□ 0.1
COL8A1-202ENST00000273342 ATP10DQ9P241 1426 aa15.67■□□□□ 0.1
COL8A1-202ENST00000273342 CBX1P83916 185 aa15.67■□□□□ 0.1
COL8A1-202ENST00000273342 UNC5CLQ8IV45 518 aa15.67■□□□□ 0.1
COL8A1-202ENST00000273342 IL1RAPL2Q9NP60 686 aa15.67■□□□□ 0.1
COL8A1-202ENST00000273342 RIMS2Q9UQ26 1411 aa15.67■□□□□ 0.1
COL8A1-202ENST00000273342 KIDINS220Q9ULH0 1771 aa15.67■□□□□ 0.1
COL8A1-202ENST00000273342 LMOD3Q0VAK6 560 aa15.67■□□□□ 0.1
COL8A1-202ENST00000273342 KNDC1Q76NI1 1749 aa15.66■□□□□ 0.1
COL8A1-202ENST00000273342 FOXO3O43524 673 aa15.66■□□□□ 0.1
COL8A1-202ENST00000273342 TXNDC2Q86VQ3 553 aa15.66■□□□□ 0.1
COL8A1-202ENST00000273342 COG3Q96JB2 828 aa15.66■□□□□ 0.1
COL8A1-202ENST00000273342 CHMP3Q9Y3E7 222 aa15.66■□□□□ 0.1
COL8A1-202ENST00000273342 MAP7D2Q96T17 732 aa15.66■□□□□ 0.1
COL8A1-202ENST00000273342 ESYT1Q9BSJ8 1104 aa15.66■□□□□ 0.1
COL8A1-202ENST00000273342 IL25Q9H293 177 aa15.66■□□□□ 0.1
COL8A1-202ENST00000273342 CNPY2Q9Y2B0 182 aa15.66■□□□□ 0.1
COL8A1-202ENST00000273342 FIBPO43427 364 aa15.65■□□□□ 0.1
COL8A1-202ENST00000273342 ADCY5O95622 1261 aa15.65■□□□□ 0.1
COL8A1-202ENST00000273342 HMMRO75330 724 aa15.65■□□□□ 0.1
COL8A1-202ENST00000273342 SPC24Q8NBT2 197 aa15.65■□□□□ 0.1
COL8A1-202ENST00000273342 ABCC3O15438 1527 aa15.64■□□□□ 0.09
COL8A1-202ENST00000273342 DDX54Q8TDD1 881 aaKnown RBP15.64■□□□□ 0.09
COL8A1-202ENST00000273342 UHRF1BP1LA0JNW5 1464 aa15.64■□□□□ 0.09
COL8A1-202ENST00000273342 PNMA6EA0A0J9YXQ4 647 aa15.64■□□□□ 0.09
COL8A1-202ENST00000273342 CPA1P15085 419 aa15.64■□□□□ 0.09
COL8A1-202ENST00000273342 MCCP23508 829 aa15.64■□□□□ 0.09
COL8A1-202ENST00000273342 SYAP1Q96A49 352 aaPredicted RBP15.64■□□□□ 0.09
COL8A1-202ENST00000273342 NOLC1Q14978 699 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL8A1-202ENST00000273342 NUTM1Q86Y26 1132 aa15.63■□□□□ 0.09
COL8A1-202ENST00000273342 MCM5P33992 734 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms