RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 VPS72Q15906 364 aa11.29□□□□□ -0.6
TRIM43-201ENST00000272395 ERBB3P21860 1342 aa11.29□□□□□ -0.6
TRIM43-201ENST00000272395 WDR17Q8IZU2 1322 aa11.28□□□□□ -0.6
TRIM43-201ENST00000272395 NWD2Q9ULI1 1742 aa11.27□□□□□ -0.6
TRIM43-201ENST00000272395 NCBP3Q53F19 620 aaKnown RBP11.27□□□□□ -0.6
TRIM43-201ENST00000272395 TOM1L2Q6ZVM7 507 aa11.27□□□□□ -0.6
TRIM43-201ENST00000272395 GJD4Q96KN9 370 aaPredicted RBP11.27□□□□□ -0.6
TRIM43-201ENST00000272395 NLRP2Q9NX02 1062 aa11.27□□□□□ -0.6
TRIM43-201ENST00000272395 SPATA31A5Q5VU36 1347 aa11.27□□□□□ -0.6
TRIM43-201ENST00000272395 SPATA31A7Q8IWB4 1347 aa11.27□□□□□ -0.6
TRIM43-201ENST00000272395 ABCC6O95255 1503 aa11.27□□□□□ -0.61
TRIM43-201ENST00000272395 SPATA31A1Q5TZJ5 1347 aa11.27□□□□□ -0.61
TRIM43-201ENST00000272395 APAF1O14727 1248 aa11.26□□□□□ -0.61
TRIM43-201ENST00000272395 RXRBP28702 533 aa11.26□□□□□ -0.61
TRIM43-201ENST00000272395 CRB1P82279 1406 aa11.26□□□□□ -0.61
TRIM43-201ENST00000272395 EIF4A2Q14240 407 aaKnown RBP11.26□□□□□ -0.61
TRIM43-201ENST00000272395 FAM98CQ17RN3 349 aaKnown RBP11.26□□□□□ -0.61
TRIM43-201ENST00000272395 KIF24Q5T7B8 1368 aa11.26□□□□□ -0.61
TRIM43-201ENST00000272395 USHBP1Q8N6Y0 703 aa11.26□□□□□ -0.61
TRIM43-201ENST00000272395 RGPD5Q99666 1765 aa11.25□□□□□ -0.61
TRIM43-201ENST00000272395 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.25□□□□□ -0.61
TRIM43-201ENST00000272395 GLI3P10071 1580 aa11.25□□□□□ -0.61
TRIM43-201ENST00000272395 CDK12Q9NYV4 1490 aaPredicted RBP11.25□□□□□ -0.61
TRIM43-201ENST00000272395 RBM6P78332 1123 aaKnown RBP11.25□□□□□ -0.61
TRIM43-201ENST00000272395 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
TRIM43-201ENST00000272395 NBPF6Q5VWK0 638 aa11.25□□□□□ -0.61
TRIM43-201ENST00000272395 DDRGK1Q96HY6 314 aa11.25□□□□□ -0.61
TRIM43-201ENST00000272395 NBPF4Q96M43 638 aa11.25□□□□□ -0.61
TRIM43-201ENST00000272395 AAMPQ13685 434 aa11.24□□□□□ -0.61
TRIM43-201ENST00000272395 PDE3AQ14432 1141 aa11.24□□□□□ -0.61
TRIM43-201ENST00000272395 TCP11L2Q8N4U5 519 aa11.24□□□□□ -0.61
TRIM43-201ENST00000272395 CARD10Q9BWT7 1032 aa11.24□□□□□ -0.61
TRIM43-201ENST00000272395 A0A0G2JS52 829 aa11.24□□□□□ -0.61
TRIM43-201ENST00000272395 CCDC146Q8IYE0 955 aa11.24□□□□□ -0.61
TRIM43-201ENST00000272395 MAP2P11137 1827 aaKnown RBP11.23□□□□□ -0.61
TRIM43-201ENST00000272395 IL13P35225 146 aa11.23□□□□□ -0.61
TRIM43-201ENST00000272395 RUNDC1Q96C34 613 aa11.23□□□□□ -0.61
TRIM43-201ENST00000272395 CFAP53Q96M91 514 aa11.23□□□□□ -0.61
TRIM43-201ENST00000272395 EYA1Q99502 592 aa11.23□□□□□ -0.61
TRIM43-201ENST00000272395 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
TRIM43-201ENST00000272395 RGS12O14924 1447 aa11.22□□□□□ -0.61
TRIM43-201ENST00000272395 ILDR2Q71H61 639 aa11.22□□□□□ -0.61
TRIM43-201ENST00000272395 COL3A1P02461 1466 aaPredicted RBP11.22□□□□□ -0.61
TRIM43-201ENST00000272395 CCDC27Q2M243 656 aa11.21□□□□□ -0.61
TRIM43-201ENST00000272395 RTL5Q5HYW3 569 aaPredicted RBP11.21□□□□□ -0.61
TRIM43-201ENST00000272395 WDR63Q8IWG1 891 aa11.21□□□□□ -0.61
TRIM43-201ENST00000272395 SEPT12Q8IYM1 358 aa11.21□□□□□ -0.61
TRIM43-201ENST00000272395 DIAPH1O60610 1272 aaKnown RBP11.2□□□□□ -0.62
TRIM43-201ENST00000272395 BARGINQ6ZT62 677 aa11.2□□□□□ -0.62
TRIM43-201ENST00000272395 AEBP1Q8IUX7 1158 aa11.2□□□□□ -0.62
TRIM43-201ENST00000272395 WWC1Q8IX03 1113 aa11.2□□□□□ -0.62
TRIM43-201ENST00000272395 FAM161AQ3B820 660 aa11.2□□□□□ -0.62
TRIM43-201ENST00000272395 THRAP3Q9Y2W1 955 aaKnown RBP11.2□□□□□ -0.62
TRIM43-201ENST00000272395 IGSF1Q8N6C5 1336 aa11.19□□□□□ -0.62
TRIM43-201ENST00000272395 DISP2A7MBM2 1401 aa11.19□□□□□ -0.62
TRIM43-201ENST00000272395 U2SURPO15042 1029 aaKnown RBP11.19□□□□□ -0.62
TRIM43-201ENST00000272395 ONECUT3O60422 494 aaPredicted RBP11.19□□□□□ -0.62
TRIM43-201ENST00000272395 DEKP35659 375 aaKnown RBP11.19□□□□□ -0.62
TRIM43-201ENST00000272395 NPM2Q86SE8 214 aaKnown RBP11.19□□□□□ -0.62
TRIM43-201ENST00000272395 SPINK5Q9NQ38 1064 aaPredicted RBP11.19□□□□□ -0.62
TRIM43-201ENST00000272395 MEGF6O75095 1541 aa11.19□□□□□ -0.62
TRIM43-201ENST00000272395 RGPD2P0DJD1 1756 aa11.19□□□□□ -0.62
TRIM43-201ENST00000272395 FAM208AQ9UK61 1670 aaKnown RBP11.18□□□□□ -0.62
TRIM43-201ENST00000272395 HMOX1P09601 288 aa11.18□□□□□ -0.62
TRIM43-201ENST00000272395 IL2RBP14784 551 aa11.18□□□□□ -0.62
TRIM43-201ENST00000272395 SULT6B1Q6IMI4 303 aa11.18□□□□□ -0.62
TRIM43-201ENST00000272395 FAM182BQ5T319 152 aa11.17□□□□□ -0.62
TRIM43-201ENST00000272395 BCL11AQ9H165 835 aa11.17□□□□□ -0.62
TRIM43-201ENST00000272395 THSD7AQ9UPZ6 1657 aa11.17□□□□□ -0.62
TRIM43-201ENST00000272395 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
TRIM43-201ENST00000272395 BCAR3O75815 825 aa11.17□□□□□ -0.62
TRIM43-201ENST00000272395 NBR1Q14596 966 aa11.17□□□□□ -0.62
TRIM43-201ENST00000272395 RAPGEF4Q8WZA2 1011 aa11.17□□□□□ -0.62
TRIM43-201ENST00000272395 U2AF1L5P0DN76 240 aaPredicted RBP11.16□□□□□ -0.62
TRIM43-201ENST00000272395 U2AF1Q01081 240 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRIM43-201ENST00000272395 MAPK8IP3Q9UPT6 1336 aa11.16□□□□□ -0.62
TRIM43-201ENST00000272395 CT47B1P0C2W7 299 aaPredicted RBP11.15□□□□□ -0.62
TRIM43-201ENST00000272395 TATP17735 454 aaPredicted RBP11.15□□□□□ -0.62
TRIM43-201ENST00000272395 DDB1Q16531 1140 aa11.15□□□□□ -0.62
TRIM43-201ENST00000272395 OVOS2A0A0G2JMS6 1433 aa11.15□□□□□ -0.62
TRIM43-201ENST00000272395 RGPD1P0DJD0 1748 aa11.15□□□□□ -0.63
TRIM43-201ENST00000272395 KRT27Q7Z3Y8 459 aa11.14□□□□□ -0.63
TRIM43-201ENST00000272395 CLUAP1Q96AJ1 413 aa11.14□□□□□ -0.63
TRIM43-201ENST00000272395 CDCA7Q9BWT1 371 aaPredicted RBP11.14□□□□□ -0.63
TRIM43-201ENST00000272395 MYH16Q9H6N6 1097 aa11.14□□□□□ -0.63
TRIM43-201ENST00000272395 LRRC37A3O60309 1634 aa11.14□□□□□ -0.63
TRIM43-201ENST00000272395 EXOC5O00471 708 aa11.14□□□□□ -0.63
TRIM43-201ENST00000272395 CANXP27824 592 aaKnown RBP11.14□□□□□ -0.63
TRIM43-201ENST00000272395 C8orf34Q49A92 452 aa11.14□□□□□ -0.63
TRIM43-201ENST00000272395 MARCH10Q8NA82 808 aaPredicted RBP11.14□□□□□ -0.63
TRIM43-201ENST00000272395 DDX54Q8TDD1 881 aaKnown RBP11.14□□□□□ -0.63
TRIM43-201ENST00000272395 TNS2Q63HR2 1409 aa11.14□□□□□ -0.63
TRIM43-201ENST00000272395 KDRP35968 1356 aa11.13□□□□□ -0.63
TRIM43-201ENST00000272395 WNK3Q9BYP7 1800 aa11.13□□□□□ -0.63
TRIM43-201ENST00000272395 RARSP54136 660 aaKnown RBP11.13□□□□□ -0.63
TRIM43-201ENST00000272395 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
TRIM43-201ENST00000272395 RSPH6AQ9H0K4 717 aa11.13□□□□□ -0.63
TRIM43-201ENST00000272395 PRKAR2BP31323 418 aa11.12□□□□□ -0.63
TRIM43-201ENST00000272395 DAXXQ9UER7 740 aaPredicted RBP11.12□□□□□ -0.63
TRIM43-201ENST00000272395 PARP4Q9UKK3 1724 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms