RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 NUTM1Q86Y26 1132 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 STK11IPQ8N1F8 1099 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 NLRP2Q9NX02 1062 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 BMP2KLQ5H9B9 411 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 CPLX2Q6PUV4 134 aaKnown RBP14.35□□□□□ -0.11
ERBB2-201ENST00000269571 LEKR1Q6ZMV7 388 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 SYNE3Q6ZMZ3 975 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 RIC3Q7Z5B4 369 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 CKAP2LQ8IYA6 745 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 TERF1P54274 439 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 CCDC83Q8IWF9 413 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 NUP62CLQ9H1M0 184 aa14.35□□□□□ -0.11
ERBB2-201ENST00000269571 RRS1Q15050 365 aaKnown RBP14.34□□□□□ -0.11
ERBB2-201ENST00000269571 JAKMIP1Q96N16 626 aaKnown RBP14.34□□□□□ -0.11
ERBB2-201ENST00000269571 ATP2B1P20020 1258 aa14.34□□□□□ -0.11
ERBB2-201ENST00000269571 RAPGEF4Q8WZA2 1011 aa14.34□□□□□ -0.11
ERBB2-201ENST00000269571 CYP46A1Q9Y6A2 500 aa14.34□□□□□ -0.11
ERBB2-201ENST00000269571 ASXL2Q76L83 1435 aa14.34□□□□□ -0.11
ERBB2-201ENST00000269571 PDCP20941 246 aa14.34□□□□□ -0.11
ERBB2-201ENST00000269571 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
ERBB2-201ENST00000269571 CTTNBP2Q8WZ74 1663 aa14.34□□□□□ -0.11
ERBB2-201ENST00000269571 AK7Q96M32 723 aa14.34□□□□□ -0.11
ERBB2-201ENST00000269571 RTEL1-TNFRSF6BF6WH68 1400 aa14.33□□□□□ -0.11
ERBB2-201ENST00000269571 KIAA0556O60303 1618 aa14.33□□□□□ -0.11
ERBB2-201ENST00000269571 RBM33Q96EV2 1170 aaKnown RBP14.33□□□□□ -0.11
ERBB2-201ENST00000269571 PLCH2O75038 1416 aa14.33□□□□□ -0.12
ERBB2-201ENST00000269571 KDM2BQ8NHM5 1336 aa14.33□□□□□ -0.12
ERBB2-201ENST00000269571 AKAP17AQ02040 695 aaKnown RBP14.33□□□□□ -0.12
ERBB2-201ENST00000269571 TRMT1Q9NXH9 659 aaKnown RBP14.33□□□□□ -0.12
ERBB2-201ENST00000269571 F6X3S4 739 aa14.33□□□□□ -0.12
ERBB2-201ENST00000269571 HSP90B2PQ58FF3 399 aa14.33□□□□□ -0.12
ERBB2-201ENST00000269571 HSP90AB4PQ58FF6 505 aa14.33□□□□□ -0.12
ERBB2-201ENST00000269571 ZKSCAN5Q9Y2L8 839 aa14.33□□□□□ -0.12
ERBB2-201ENST00000269571 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
ERBB2-201ENST00000269571 TSR1Q2NL82 804 aaKnown RBP14.33□□□□□ -0.12
ERBB2-201ENST00000269571 SPATA32Q96LK8 384 aa14.33□□□□□ -0.12
ERBB2-201ENST00000269571 TPM1P09493 284 aa14.32□□□□□ -0.12
ERBB2-201ENST00000269571 FBLN1P23142 703 aa14.32□□□□□ -0.12
ERBB2-201ENST00000269571 TRIM34Q9BYJ4 488 aa14.32□□□□□ -0.12
ERBB2-201ENST00000269571 NAT10Q9H0A0 1025 aaKnown RBP14.32□□□□□ -0.12
ERBB2-201ENST00000269571 TRAPPC8Q9Y2L5 1435 aa14.32□□□□□ -0.12
ERBB2-201ENST00000269571 GTF2A1P52655 376 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-201ENST00000269571 ME1P48163 572 aa14.32□□□□□ -0.12
ERBB2-201ENST00000269571 RPAP2Q8IXW5 612 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-201ENST00000269571 DDX11Q96FC9 970 aa14.32□□□□□ -0.12
ERBB2-201ENST00000269571 DENND4BO75064 1496 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-201ENST00000269571 PARD3Q8TEW0 1356 aa14.32□□□□□ -0.12
ERBB2-201ENST00000269571 PSMA5P28066 241 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 SYCP2Q9BX26 1530 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 CASTP20810 708 aaKnown RBP14.31□□□□□ -0.12
ERBB2-201ENST00000269571 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
ERBB2-201ENST00000269571 CCDC61Q9Y6R9 512 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 WDR62O43379 1518 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 DISP1Q96F81 1524 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 PER1O15534 1290 aaPredicted RBP14.31□□□□□ -0.12
ERBB2-201ENST00000269571 MARCH6O60337 910 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 MAP3K11Q16584 847 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 GIMAP6Q6P9H5 292 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 C16orf71Q8IYS4 520 aaPredicted RBP14.31□□□□□ -0.12
ERBB2-201ENST00000269571 SIL1Q9H173 461 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 TNNT1P13805 278 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 TRDNQ13061 729 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 CCDC183Q5T5S1 534 aa14.31□□□□□ -0.12
ERBB2-201ENST00000269571 GTF2F1P35269 517 aaKnown RBP eCLIP14.3□□□□□ -0.12
ERBB2-201ENST00000269571 NUDT16Q96DE0 195 aaKnown RBP14.3□□□□□ -0.12
ERBB2-201ENST00000269571 PDRG1Q9NUG6 133 aa14.3□□□□□ -0.12
ERBB2-201ENST00000269571 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
ERBB2-201ENST00000269571 ANKLE2Q86XL3 938 aa14.3□□□□□ -0.12
ERBB2-201ENST00000269571 NOS1P29475 1434 aa14.3□□□□□ -0.12
ERBB2-201ENST00000269571 RDXP35241 583 aaKnown RBP14.3□□□□□ -0.12
ERBB2-201ENST00000269571 TRIM29Q14134 588 aa14.3□□□□□ -0.12
ERBB2-201ENST00000269571 RAB3GAP1Q15042 981 aa14.3□□□□□ -0.12
ERBB2-201ENST00000269571 HDGFL1Q5TGJ6 251 aa14.3□□□□□ -0.12
ERBB2-201ENST00000269571 CCDC30Q5VVM6 783 aa14.3□□□□□ -0.12
ERBB2-201ENST00000269571 LRSAM1Q6UWE0 723 aa14.3□□□□□ -0.12
ERBB2-201ENST00000269571 MCM10Q7L590 875 aa14.3□□□□□ -0.12
ERBB2-201ENST00000269571 SRGAP3O43295 1099 aa14.29□□□□□ -0.12
ERBB2-201ENST00000269571 PCMTD1Q96MG8 357 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-201ENST00000269571 NUCB1Q02818 461 aa14.29□□□□□ -0.12
ERBB2-201ENST00000269571 WASHC4Q2M389 1173 aa14.29□□□□□ -0.12
ERBB2-201ENST00000269571 LRRFIP1Q32MZ4 808 aaKnown RBP14.29□□□□□ -0.12
ERBB2-201ENST00000269571 H0YHG0 523 aa14.29□□□□□ -0.12
ERBB2-201ENST00000269571 BRPF1P55201 1214 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-201ENST00000269571 NOLC1Q14978 699 aaKnown RBP eCLIP14.29□□□□□ -0.129e-7■■□□□ 13.7
ERBB2-201ENST00000269571 NFE2L2Q16236 605 aa14.29□□□□□ -0.12
ERBB2-201ENST00000269571 HS1BP3Q53T59 392 aa14.29□□□□□ -0.12
ERBB2-201ENST00000269571 G3V3G9 751 aa14.29□□□□□ -0.12
ERBB2-201ENST00000269571 STK38Q15208 465 aa14.29□□□□□ -0.12
ERBB2-201ENST00000269571 DCAF8Q5TAQ9 597 aa14.29□□□□□ -0.12
ERBB2-201ENST00000269571 VPS53Q5VIR6 699 aa14.29□□□□□ -0.12
ERBB2-201ENST00000269571 FCHSD2O94868 740 aa14.28□□□□□ -0.12
ERBB2-201ENST00000269571 DMTNQ08495 405 aa14.28□□□□□ -0.12
ERBB2-201ENST00000269571 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
ERBB2-201ENST00000269571 POLR3GO15318 223 aaPredicted RBP14.28□□□□□ -0.12
ERBB2-201ENST00000269571 PTPN14Q15678 1187 aa14.28□□□□□ -0.12
ERBB2-201ENST00000269571 TMX3Q96JJ7 454 aa14.28□□□□□ -0.12
ERBB2-201ENST00000269571 RBSNQ9H1K0 784 aa14.28□□□□□ -0.12
ERBB2-201ENST00000269571 NUP160Q12769 1436 aa14.28□□□□□ -0.12
ERBB2-201ENST00000269571 ATAD2Q6PL18 1390 aa14.28□□□□□ -0.12
ERBB2-201ENST00000269571 SERPINC1P01008 464 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms