RNA–Protein interactions for RNA: ENST00000269468.9

MBD1-201, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-201ENST00000269468 PRDM4Q9UKN5 801 aa17.61■□□□□ 0.41
MBD1-201ENST00000269468 TMX3Q96JJ7 454 aa17.6■□□□□ 0.41
MBD1-201ENST00000269468 CDK19Q9BWU1 502 aa17.6■□□□□ 0.41
MBD1-201ENST00000269468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.6■□□□□ 0.41
MBD1-201ENST00000269468 ERC2O15083 957 aa17.6■□□□□ 0.41
MBD1-201ENST00000269468 TSPY26PQ9H489 355 aa17.6■□□□□ 0.41
MBD1-201ENST00000269468 ANKRD44Q8N8A2 993 aa17.59■□□□□ 0.41
MBD1-201ENST00000269468 FAM177BA6PVY3 158 aa17.59■□□□□ 0.41
MBD1-201ENST00000269468 MBD3O95983 291 aa17.59■□□□□ 0.41
MBD1-201ENST00000269468 KIAA2012Q0VF49 1180 aa17.59■□□□□ 0.41
MBD1-201ENST00000269468 FAM135BQ49AJ0 1406 aa17.58■□□□□ 0.41
MBD1-201ENST00000269468 MCM5P33992 734 aa17.58■□□□□ 0.41
MBD1-201ENST00000269468 CEP85Q6P2H3 762 aa17.58■□□□□ 0.41
MBD1-201ENST00000269468 MEIS3Q99687 375 aa17.58■□□□□ 0.41
MBD1-201ENST00000269468 PLCB2Q00722 1185 aa17.58■□□□□ 0.4
MBD1-201ENST00000269468 C17orf53Q8N3J3 647 aaPredicted RBP17.58■□□□□ 0.4
MBD1-201ENST00000269468 ZHX1Q9UKY1 873 aaPredicted RBP17.58■□□□□ 0.4
MBD1-201ENST00000269468 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.4
MBD1-201ENST00000269468 ARHGEF28Q8N1W1 1705 aaKnown RBP17.58■□□□□ 0.4
MBD1-201ENST00000269468 CAMSAP1Q5T5Y3 1602 aa17.57■□□□□ 0.4
MBD1-201ENST00000269468 IDI1Q13907 227 aa17.57■□□□□ 0.4
MBD1-201ENST00000269468 ZRANB1Q9UGI0 708 aa17.57■□□□□ 0.4
MBD1-201ENST00000269468 GADD45BO75293 160 aaPredicted RBP17.57■□□□□ 0.4
MBD1-201ENST00000269468 SLC4A10Q6U841 1118 aa17.57■□□□□ 0.4
MBD1-201ENST00000269468 ARHGAP31Q2M1Z3 1444 aa17.56■□□□□ 0.4
MBD1-201ENST00000269468 ZNF853P0CG23 659 aa17.56■□□□□ 0.4
MBD1-201ENST00000269468 UPF3BQ9BZI7 483 aaKnown RBP17.55■□□□□ 0.4
MBD1-201ENST00000269468 USP25Q9UHP3 1055 aa17.55■□□□□ 0.4
MBD1-201ENST00000269468 RRS1Q15050 365 aaKnown RBP17.55■□□□□ 0.4
MBD1-201ENST00000269468 RPAP2Q8IXW5 612 aaPredicted RBP17.55■□□□□ 0.4
MBD1-201ENST00000269468 PALD1Q9ULE6 856 aa17.55■□□□□ 0.4
MBD1-201ENST00000269468 TTC12Q9H892 705 aaPredicted RBP17.54■□□□□ 0.4
MBD1-201ENST00000269468 ANO2Q9NQ90 1003 aa17.54■□□□□ 0.4
MBD1-201ENST00000269468 RILPL2Q969X0 211 aa17.54■□□□□ 0.4
MBD1-201ENST00000269468 KNDC1Q76NI1 1749 aa17.54■□□□□ 0.4
MBD1-201ENST00000269468 MTERF4Q7Z6M4 381 aaKnown RBP17.53■□□□□ 0.4
MBD1-201ENST00000269468 MSH6P52701 1360 aa17.53■□□□□ 0.4
MBD1-201ENST00000269468 CD163L1Q9NR16 1453 aa17.53■□□□□ 0.4
MBD1-201ENST00000269468 TRIM6-TRIM34B2RNG4 842 aa17.53■□□□□ 0.4
MBD1-201ENST00000269468 SYAP1Q96A49 352 aaPredicted RBP17.53■□□□□ 0.4
MBD1-201ENST00000269468 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
MBD1-201ENST00000269468 BRD1O95696 1058 aa17.53■□□□□ 0.4
MBD1-201ENST00000269468 NME9Q86XW9 330 aa17.53■□□□□ 0.4
MBD1-201ENST00000269468 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.52■□□□□ 0.4
MBD1-201ENST00000269468 ARAP3Q8WWN8 1544 aa17.52■□□□□ 0.4
MBD1-201ENST00000269468 IL13P35225 146 aa17.52■□□□□ 0.4
MBD1-201ENST00000269468 PDE1AP54750 535 aa17.52■□□□□ 0.39
MBD1-201ENST00000269468 KIDINS220Q9ULH0 1771 aa17.51■□□□□ 0.39
MBD1-201ENST00000269468 LMOD3Q0VAK6 560 aa17.51■□□□□ 0.39
MBD1-201ENST00000269468 WAPLQ7Z5K2 1190 aa17.51■□□□□ 0.39
MBD1-201ENST00000269468 USP48Q86UV5 1035 aa17.51■□□□□ 0.39
MBD1-201ENST00000269468 UHRF1BP1LA0JNW5 1464 aa17.51■□□□□ 0.39
MBD1-201ENST00000269468 F6X3S4 739 aa17.51■□□□□ 0.39
MBD1-201ENST00000269468 ATP10DQ9P241 1426 aa17.51■□□□□ 0.39
MBD1-201ENST00000269468 CBX1P83916 185 aa17.5■□□□□ 0.39
MBD1-201ENST00000269468 MCM10Q7L590 875 aa17.5■□□□□ 0.39
MBD1-201ENST00000269468 MIS18AQ9NYP9 233 aa17.5■□□□□ 0.39
MBD1-201ENST00000269468 ZFYVE9O95405 1425 aa17.5■□□□□ 0.39
MBD1-201ENST00000269468 DTNBO60941 627 aa17.5■□□□□ 0.39
MBD1-201ENST00000269468 SMAP1Q8IYB5 467 aaPredicted RBP17.5■□□□□ 0.39
MBD1-201ENST00000269468 RTL1A6NKG5 1358 aa17.5■□□□□ 0.39
MBD1-201ENST00000269468 YTHDC2Q9H6S0 1430 aaKnown RBP17.5■□□□□ 0.39
MBD1-201ENST00000269468 LARP6Q9BRS8 491 aaKnown RBP17.5■□□□□ 0.39
MBD1-201ENST00000269468 ABCA9Q8IUA7 1624 aa17.49■□□□□ 0.39
MBD1-201ENST00000269468 LMTK2Q8IWU2 1503 aa17.49■□□□□ 0.39
MBD1-201ENST00000269468 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
MBD1-201ENST00000269468 NOLC1Q14978 699 aaKnown RBP eCLIP17.49■□□□□ 0.39
MBD1-201ENST00000269468 MYRIPQ8NFW9 859 aa17.49■□□□□ 0.39
MBD1-201ENST00000269468 CCDC94Q9BW85 323 aaPredicted RBP17.49■□□□□ 0.39
MBD1-201ENST00000269468 RIMS2Q9UQ26 1411 aa17.49■□□□□ 0.39
MBD1-201ENST00000269468 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
MBD1-201ENST00000269468 MCCP23508 829 aa17.49■□□□□ 0.39
MBD1-201ENST00000269468 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
MBD1-201ENST00000269468 ADCY5O95622 1261 aa17.48■□□□□ 0.39
MBD1-201ENST00000269468 AEBP1Q8IUX7 1158 aa17.48■□□□□ 0.39
MBD1-201ENST00000269468 HMMRO75330 724 aa17.48■□□□□ 0.39
MBD1-201ENST00000269468 ESYT1Q9BSJ8 1104 aa17.48■□□□□ 0.39
MBD1-201ENST00000269468 ABCC3O15438 1527 aa17.47■□□□□ 0.39
MBD1-201ENST00000269468 PHF14O94880 888 aa17.47■□□□□ 0.39
MBD1-201ENST00000269468 MCM2P49736 904 aa17.46■□□□□ 0.39
MBD1-201ENST00000269468 STAG3Q9UJ98 1225 aa17.46■□□□□ 0.39
MBD1-201ENST00000269468 NEXMIFQ5QGS0 1516 aa17.46■□□□□ 0.39
MBD1-201ENST00000269468 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.39
MBD1-201ENST00000269468 ZNF710Q8N1W2 664 aa17.45■□□□□ 0.38
MBD1-201ENST00000269468 PIBF1Q8WXW3 757 aa17.45■□□□□ 0.38
MBD1-201ENST00000269468 SULT6B1Q6IMI4 303 aa17.45■□□□□ 0.38
MBD1-201ENST00000269468 G2E3Q7L622 706 aa17.45■□□□□ 0.38
MBD1-201ENST00000269468 MAP2P11137 1827 aaKnown RBP17.45■□□□□ 0.38
MBD1-201ENST00000269468 RAPGEF3O95398 923 aa17.45■□□□□ 0.38
MBD1-201ENST00000269468 CUL4AQ13619 759 aa17.45■□□□□ 0.38
MBD1-201ENST00000269468 NCKAP5LQ9HCH0 1330 aa17.44■□□□□ 0.38
MBD1-201ENST00000269468 PTPRMP28827 1452 aa17.44■□□□□ 0.38
MBD1-201ENST00000269468 ARHGEF40Q8TER5 1519 aa17.44■□□□□ 0.38
MBD1-201ENST00000269468 SOX12O15370 315 aa17.44■□□□□ 0.38
MBD1-201ENST00000269468 PPP4R3BQ5MIZ7 849 aa17.44■□□□□ 0.38
MBD1-201ENST00000269468 KIF24Q5T7B8 1368 aa17.44■□□□□ 0.38
MBD1-201ENST00000269468 ANKRD26Q9UPS8 1709 aa17.44■□□□□ 0.38
MBD1-201ENST00000269468 FIBPO43427 364 aa17.43■□□□□ 0.38
MBD1-201ENST00000269468 MAP4K4O95819 1239 aaPredicted RBP17.43■□□□□ 0.38
MBD1-201ENST00000269468 SPDYE4A6NLX3 237 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms