RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 CTDP1Q9Y5B0 961 aaPredicted RBP16.43■□□□□ 0.22
PTPN23-201ENST00000265562 SRGAP3O43295 1099 aa16.43■□□□□ 0.22
PTPN23-201ENST00000265562 CCDC83Q8IWF9 413 aa16.43■□□□□ 0.22
PTPN23-201ENST00000265562 TBC1D32Q96NH3 1257 aa16.43■□□□□ 0.22
PTPN23-201ENST00000265562 CRACR2AQ9BSW2 395 aa16.43■□□□□ 0.22
PTPN23-201ENST00000265562 LRRFIP2Q9Y608 721 aaKnown RBP16.43■□□□□ 0.22
PTPN23-201ENST00000265562 URI1O94763 535 aaPredicted RBP16.43■□□□□ 0.22
PTPN23-201ENST00000265562 AACSQ86V21 672 aa16.43■□□□□ 0.22
PTPN23-201ENST00000265562 C16orf45Q96MC5 204 aaPredicted RBP16.42■□□□□ 0.22
PTPN23-201ENST00000265562 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
PTPN23-201ENST00000265562 BAG4O95429 457 aaKnown RBP16.42■□□□□ 0.22
PTPN23-201ENST00000265562 NEMFO60524 1076 aa16.42■□□□□ 0.22
PTPN23-201ENST00000265562 CDKL5O76039 1030 aa16.42■□□□□ 0.22
PTPN23-201ENST00000265562 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
PTPN23-201ENST00000265562 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
PTPN23-201ENST00000265562 TTC39AQ5SRH9 613 aa16.42■□□□□ 0.22
PTPN23-201ENST00000265562 CCDC148Q8NFR7 591 aa16.42■□□□□ 0.22
PTPN23-201ENST00000265562 SIL1Q9H173 461 aa16.42■□□□□ 0.22
PTPN23-201ENST00000265562 TIAM1Q13009 1591 aa16.42■□□□□ 0.22
PTPN23-201ENST00000265562 EHBP1L1Q8N3D4 1523 aa16.42■□□□□ 0.22
PTPN23-201ENST00000265562 XRCC6P12956 609 aaKnown RBP eCLIP16.42■□□□□ 0.22
PTPN23-201ENST00000265562 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.42■□□□□ 0.222e-7■■■□□ 17
PTPN23-201ENST00000265562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.41■□□□□ 0.224e-6■■□□□ 12.5
PTPN23-201ENST00000265562 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
PTPN23-201ENST00000265562 FCHSD2O94868 740 aa16.41■□□□□ 0.22
PTPN23-201ENST00000265562 ADCY5O95622 1261 aa16.41■□□□□ 0.22
PTPN23-201ENST00000265562 ZRSR2Q15696 482 aaKnown RBP16.41■□□□□ 0.22
PTPN23-201ENST00000265562 MX1P20591 662 aa16.41■□□□□ 0.22
PTPN23-201ENST00000265562 ANKRD30BQ9BXX2 1392 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 GIMAP7Q8NHV1 300 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 PRDM2Q13029 1718 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 POLR3GO15318 223 aaPredicted RBP16.4■□□□□ 0.22
PTPN23-201ENST00000265562 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 PRXQ9BXM0 1461 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 CASQ1P31415 396 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 UVSSAQ2YD98 709 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
PTPN23-201ENST00000265562 NUTM2GQ5VZR2 741 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 STK11IPQ8N1F8 1099 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 SH2B1Q9NRF2 756 aaPredicted RBP16.4■□□□□ 0.22
PTPN23-201ENST00000265562 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 EXOC6BQ9Y2D4 811 aa16.4■□□□□ 0.22
PTPN23-201ENST00000265562 CCDC69A6NI79 296 aa16.39■□□□□ 0.21
PTPN23-201ENST00000265562 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
PTPN23-201ENST00000265562 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
PTPN23-201ENST00000265562 ALDH1L2Q3SY69 923 aa16.39■□□□□ 0.21
PTPN23-201ENST00000265562 NOL7Q9UMY1 257 aaKnown RBP16.39■□□□□ 0.21
PTPN23-201ENST00000265562 SYCP1Q15431 976 aa16.39■□□□□ 0.21
PTPN23-201ENST00000265562 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.21
PTPN23-201ENST00000265562 PRAM1Q96QH2 718 aa16.39■□□□□ 0.21
PTPN23-201ENST00000265562 NEFHP12036 1026 aa16.39■□□□□ 0.21
PTPN23-201ENST00000265562 KIAA1328Q86T90 577 aa16.39■□□□□ 0.21
PTPN23-201ENST00000265562 NLRP2Q9NX02 1062 aa16.39■□□□□ 0.21
PTPN23-201ENST00000265562 SLC3A2P08195 630 aaKnown RBP16.38■□□□□ 0.21
PTPN23-201ENST00000265562 GTF2F1P35269 517 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPN23-201ENST00000265562 MAP9Q49MG5 647 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 KRT18P05783 430 aaKnown RBP16.38■□□□□ 0.21
PTPN23-201ENST00000265562 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
PTPN23-201ENST00000265562 TANGO6Q9C0B7 1094 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 CTNNA3Q9UI47 895 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 C9orf84Q5VXU9 1444 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 KIF5CO60282 957 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 ZSCAN23Q3MJ62 389 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 JAKMIP3Q5VZ66 844 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 TAX1BP1Q86VP1 789 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 EFCAB5A4FU69 1503 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
PTPN23-201ENST00000265562 TRMT1Q9NXH9 659 aaKnown RBP16.37■□□□□ 0.21
PTPN23-201ENST00000265562 CTAGE5O15320 804 aa16.37■□□□□ 0.21
PTPN23-201ENST00000265562 SMARCA5O60264 1052 aaPredicted RBP16.37■□□□□ 0.21
PTPN23-201ENST00000265562 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
PTPN23-201ENST00000265562 NAIPQ13075 1403 aa16.37■□□□□ 0.21
PTPN23-201ENST00000265562 ENOX2Q16206 610 aaKnown RBP16.37■□□□□ 0.21
PTPN23-201ENST00000265562 PRPF40BQ6NWY9 871 aaKnown RBP16.37■□□□□ 0.21
PTPN23-201ENST00000265562 DHX29Q7Z478 1369 aaKnown RBP16.36■□□□□ 0.21
PTPN23-201ENST00000265562 TOP1P11387 765 aaKnown RBP16.36■□□□□ 0.21
PTPN23-201ENST00000265562 CKAP2LQ8IYA6 745 aa16.36■□□□□ 0.21
PTPN23-201ENST00000265562 NACAP1Q9BZK3 213 aa16.36■□□□□ 0.21
PTPN23-201ENST00000265562 DDX19AQ9NUU7 478 aaKnown RBP16.36■□□□□ 0.21
PTPN23-201ENST00000265562 GSDMDP57764 484 aa16.36■□□□□ 0.21
PTPN23-201ENST00000265562 KIF4BQ2VIQ3 1234 aa16.36■□□□□ 0.21
PTPN23-201ENST00000265562 BMP2KLQ5H9B9 411 aa16.36■□□□□ 0.21
PTPN23-201ENST00000265562 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
PTPN23-201ENST00000265562 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
PTPN23-201ENST00000265562 MCM3P25205 808 aa16.36■□□□□ 0.21
PTPN23-201ENST00000265562 FAM69CQ0P6D2 419 aa16.36■□□□□ 0.21
PTPN23-201ENST00000265562 LIMCH1Q9UPQ0 1083 aa16.36■□□□□ 0.21
PTPN23-201ENST00000265562 BMS1Q14692 1282 aaKnown RBP16.36■□□□□ 0.21
PTPN23-201ENST00000265562 EIF5P55010 431 aaKnown RBP16.35■□□□□ 0.21
PTPN23-201ENST00000265562 RBM33Q96EV2 1170 aaKnown RBP16.35■□□□□ 0.21
PTPN23-201ENST00000265562 FAM107BQ9H098 131 aa16.35■□□□□ 0.21
PTPN23-201ENST00000265562 PAXBP1Q9Y5B6 917 aa16.35■□□□□ 0.21
PTPN23-201ENST00000265562 SEPT7Q16181 437 aaKnown RBP16.35■□□□□ 0.21
PTPN23-201ENST00000265562 LRSAM1Q6UWE0 723 aa16.35■□□□□ 0.21
PTPN23-201ENST00000265562 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
PTPN23-201ENST00000265562 IGHDP01880 384 aa16.35■□□□□ 0.21
PTPN23-201ENST00000265562 DHX37Q8IY37 1157 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms