RNA–Protein interactions for RNA: ENST00000265138.3

ARRDC3-201, Transcript of arrestin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARRDC3, Length 4,188 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-201ENST00000265138 DHX8Q14562 1220 aaKnown RBP8.39□□□□□ -1.07
ARRDC3-201ENST00000265138 CT47A1Q5JQC4 288 aaPredicted RBP8.39□□□□□ -1.07
ARRDC3-201ENST00000265138 POLKQ9UBT6 870 aa8.39□□□□□ -1.07
ARRDC3-201ENST00000265138 ELP1O95163 1332 aa8.39□□□□□ -1.07
ARRDC3-201ENST00000265138 PTGS1P23219 599 aa8.39□□□□□ -1.07
ARRDC3-201ENST00000265138 MAP2K1Q02750 393 aaPredicted RBP8.39□□□□□ -1.07
ARRDC3-201ENST00000265138 CCDC186Q7Z3E2 898 aa8.39□□□□□ -1.07
ARRDC3-201ENST00000265138 TICAM2Q86XR7 235 aa8.39□□□□□ -1.07
ARRDC3-201ENST00000265138 TACO1Q9BSH4 297 aaKnown RBP8.39□□□□□ -1.07
ARRDC3-201ENST00000265138 KIF3CO14782 793 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 UBE2HP62256 183 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 RUNDC1Q96C34 613 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 FBXO3Q9UK99 471 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 ABCC2Q92887 1545 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 UGGT2Q9NYU1 1516 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 CLSTN1O94985 981 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 LMAN1P49257 510 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 CEP89Q96ST8 783 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 FAM53CQ9NYF3 392 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 MKRN1Q9UHC7 482 aaKnown RBP8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 ZNF608Q9ULD9 1512 aaPredicted RBP8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 MMS22LQ6ZRQ5 1243 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 EXOC4Q96A65 974 aa8.38□□□□□ -1.07
ARRDC3-201ENST00000265138 ERBINQ96RT1 1412 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 H0YHG0 523 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 NPHP1O15259 732 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 CCP110O43303 1012 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 SARNPP82979 210 aaKnown RBP8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 CFAP53Q96M91 514 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 PLXNC1O60486 1568 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 SWT1Q5T5J6 900 aaKnown RBP8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 SUGP1Q8IWZ8 645 aaKnown RBP8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 TRIM66O15016 1216 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 BRD1O95696 1058 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 MNAT1P51948 309 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 E9PCH4 1651 aa8.37□□□□□ -1.07
ARRDC3-201ENST00000265138 GOLGA6L4A6NEF3 574 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 GOLGA6L19H0YKK7 550 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 PPP1R12AO14974 1030 aaPredicted RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 PNMA6AP0CW24 399 aaPredicted RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 RDXP35241 583 aaKnown RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 ACTN2P35609 894 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 RBM6P78332 1123 aaKnown RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 ATF7IPQ6VMQ6 1270 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 ZGPATQ8N5A5 531 aaKnown RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 INTS4Q96HW7 963 aaKnown RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 SRRTQ9BXP5 876 aaKnown RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 PSD3Q9NYI0 1048 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 YEATS2Q9ULM3 1422 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 PKP1Q13835 747 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 TTLL5Q6EMB2 1281 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 USP48Q86UV5 1035 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 NSFL1CQ9UNZ2 370 aaKnown RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 CCDC141Q6ZP82 1450 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 COL17A1Q9UMD9 1497 aaPredicted RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 DAPK1P53355 1430 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 DDX11Q96FC9 970 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 KCNF1Q9H3M0 494 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 EIF3JO75822 258 aaKnown RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 HMGB1P09429 215 aaKnown RBP8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 GYS2P54840 703 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 MLECQ14165 292 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 TPRNQ4KMQ1 711 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 ACBD3Q9H3P7 528 aa8.36□□□□□ -1.07
ARRDC3-201ENST00000265138 SAMD9Q5K651 1589 aa8.35□□□□□ -1.07
ARRDC3-201ENST00000265138 CAVIN2O95810 425 aa8.35□□□□□ -1.07
ARRDC3-201ENST00000265138 EFCAB13Q8IY85 973 aa8.35□□□□□ -1.07
ARRDC3-201ENST00000265138 SCAF11Q99590 1463 aaKnown RBP8.35□□□□□ -1.07
ARRDC3-201ENST00000265138 PRR29P0C7W0 189 aa8.35□□□□□ -1.07
ARRDC3-201ENST00000265138 NEK4P51957 841 aa8.35□□□□□ -1.07
ARRDC3-201ENST00000265138 ARHGAP29Q52LW3 1261 aa8.35□□□□□ -1.07
ARRDC3-201ENST00000265138 CLIP2Q9UDT6 1046 aa8.35□□□□□ -1.07
ARRDC3-201ENST00000265138 OAS2P29728 719 aaKnown RBP8.35□□□□□ -1.07
ARRDC3-201ENST00000265138 ZSCAN25Q6NSZ9 544 aa8.35□□□□□ -1.07
ARRDC3-201ENST00000265138 FAM135AQ9P2D6 1515 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 CASTP20810 708 aaKnown RBP8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 NAA30Q147X3 362 aaPredicted RBP8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 SART3Q15020 963 aaKnown RBP8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 HSP90B2PQ58FF3 399 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 ERC1Q8IUD2 1116 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 EP400NLQ6ZTU2 488 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 IQUBQ8NA54 791 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 USP26Q9BXU7 913 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 ST7Q9NRC1 585 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 MAP3K11Q16584 847 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 FOXD4L6Q3SYB3 417 aaPredicted RBP8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 JAKMIP3Q5VZ66 844 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 FOXD4L3Q6VB84 417 aaPredicted RBP8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 ARFGAP3Q9NP61 516 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 NUP155O75694 1391 aa8.34□□□□□ -1.07
ARRDC3-201ENST00000265138 SMC2O95347 1197 aa8.33□□□□□ -1.08
ARRDC3-201ENST00000265138 SMC1AQ14683 1233 aaKnown RBP8.33□□□□□ -1.08
ARRDC3-201ENST00000265138 HOMER1Q86YM7 354 aa8.33□□□□□ -1.08
ARRDC3-201ENST00000265138 FMNL3Q8IVF7 1028 aa8.33□□□□□ -1.08
ARRDC3-201ENST00000265138 ZDHHC9Q9Y397 364 aa8.33□□□□□ -1.08
ARRDC3-201ENST00000265138 ATAD2BQ9ULI0 1458 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms