RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
LCN1-201ENST00000263598 CHD4Q14839 1912 aa12.6□□□□□ -0.39
LCN1-201ENST00000263598 KCNQ4P56696 695 aa12.6□□□□□ -0.39
LCN1-201ENST00000263598 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
LCN1-201ENST00000263598 QSER1Q2KHR3 1735 aa12.59□□□□□ -0.39
LCN1-201ENST00000263598 USP47Q96K76 1375 aa12.59□□□□□ -0.39
LCN1-201ENST00000263598 MSH5O43196 834 aa12.59□□□□□ -0.39
LCN1-201ENST00000263598 HMGB2P26583 209 aaKnown RBP12.59□□□□□ -0.39
LCN1-201ENST00000263598 CGNL1Q0VF96 1302 aa12.59□□□□□ -0.39
LCN1-201ENST00000263598 RTL1A6NKG5 1358 aa12.58□□□□□ -0.4
LCN1-201ENST00000263598 NSD2O96028 1365 aa12.58□□□□□ -0.4
LCN1-201ENST00000263598 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.4
LCN1-201ENST00000263598 GIGYF1O75420 1035 aaPredicted RBP12.58□□□□□ -0.4
LCN1-201ENST00000263598 TESK2Q96S53 571 aa12.58□□□□□ -0.4
LCN1-201ENST00000263598 KAT6BQ8WYB5 2073 aa12.58□□□□□ -0.4
LCN1-201ENST00000263598 DOT1LQ8TEK3 1739 aa12.57□□□□□ -0.4
LCN1-201ENST00000263598 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
LCN1-201ENST00000263598 FBLN1P23142 703 aa12.57□□□□□ -0.4
LCN1-201ENST00000263598 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
LCN1-201ENST00000263598 MEGF6O75095 1541 aa12.57□□□□□ -0.4
LCN1-201ENST00000263598 GRIN3BO60391 1043 aa12.56□□□□□ -0.4
LCN1-201ENST00000263598 RRS1Q15050 365 aaKnown RBP12.56□□□□□ -0.4
LCN1-201ENST00000263598 NBPF6Q5VWK0 638 aa12.56□□□□□ -0.4
LCN1-201ENST00000263598 NLGN2Q8NFZ4 835 aa12.56□□□□□ -0.4
LCN1-201ENST00000263598 NBPF4Q96M43 638 aa12.56□□□□□ -0.4
LCN1-201ENST00000263598 COL24A1Q17RW2 1714 aa12.56□□□□□ -0.4
LCN1-201ENST00000263598 GOLGB1Q14789 3259 aaKnown RBP12.55□□□□□ -0.4
LCN1-201ENST00000263598 LY75O60449 1722 aa12.55□□□□□ -0.4
LCN1-201ENST00000263598 TATP17735 454 aaPredicted RBP12.55□□□□□ -0.4
LCN1-201ENST00000263598 COL23A1Q86Y22 540 aaPredicted RBP12.55□□□□□ -0.4
LCN1-201ENST00000263598 FYB1O15117 783 aa12.54□□□□□ -0.4
LCN1-201ENST00000263598 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
LCN1-201ENST00000263598 FLAD1Q8NFF5 587 aa12.54□□□□□ -0.4
LCN1-201ENST00000263598 GGNBP2Q9H3C7 697 aa12.54□□□□□ -0.4
LCN1-201ENST00000263598 PCDH11XQ9BZA7 1347 aa12.54□□□□□ -0.4
LCN1-201ENST00000263598 PCDH11YQ9BZA8 1340 aa12.54□□□□□ -0.4
LCN1-201ENST00000263598 TMF1P82094 1093 aa12.53□□□□□ -0.4
LCN1-201ENST00000263598 SHANK3Q9BYB0 1731 aa12.53□□□□□ -0.4
LCN1-201ENST00000263598 TUBGCP6Q96RT7 1819 aa12.53□□□□□ -0.4
LCN1-201ENST00000263598 YBX3P16989 372 aaKnown RBP eCLIP12.52□□□□□ -0.41
LCN1-201ENST00000263598 MSL1Q68DK7 614 aa12.52□□□□□ -0.41
LCN1-201ENST00000263598 INSRP06213 1382 aa12.52□□□□□ -0.41
LCN1-201ENST00000263598 PALLDQ8WX93 1383 aa12.52□□□□□ -0.41
LCN1-201ENST00000263598 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
LCN1-201ENST00000263598 CDCA8Q53HL2 280 aa12.51□□□□□ -0.41
LCN1-201ENST00000263598 MPRIPQ6WCQ1 1025 aa12.51□□□□□ -0.41
LCN1-201ENST00000263598 CD2APQ9Y5K6 639 aa12.51□□□□□ -0.41
LCN1-201ENST00000263598 FLT4P35916 1363 aa12.51□□□□□ -0.41
LCN1-201ENST00000263598 KIF24Q5T7B8 1368 aa12.51□□□□□ -0.41
LCN1-201ENST00000263598 HSP90AB2PQ58FF8 381 aa12.5□□□□□ -0.41
LCN1-201ENST00000263598 SMARCC1Q92922 1105 aaPredicted RBP12.5□□□□□ -0.41
LCN1-201ENST00000263598 AK7Q96M32 723 aa12.5□□□□□ -0.41
LCN1-201ENST00000263598 C5P01031 1676 aa12.48□□□□□ -0.41
LCN1-201ENST00000263598 NSD3Q9BZ95 1437 aa12.47□□□□□ -0.41
LCN1-201ENST00000263598 CYP27B1O15528 508 aa12.47□□□□□ -0.41
LCN1-201ENST00000263598 ATP10DQ9P241 1426 aa12.46□□□□□ -0.41
LCN1-201ENST00000263598 PHF14O94880 888 aa12.46□□□□□ -0.41
LCN1-201ENST00000263598 GPBP1L1Q9HC44 474 aaPredicted RBP12.46□□□□□ -0.41
LCN1-201ENST00000263598 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
LCN1-201ENST00000263598 PPM1GO15355 546 aaPredicted RBP12.45□□□□□ -0.42
LCN1-201ENST00000263598 PIGBQ92521 554 aa12.45□□□□□ -0.42
LCN1-201ENST00000263598 KIF20BQ96Q89 1820 aa12.44□□□□□ -0.42
LCN1-201ENST00000263598 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.44□□□□□ -0.42
LCN1-201ENST00000263598 SSFA2P28290 1259 aa12.44□□□□□ -0.42
LCN1-201ENST00000263598 NKX1-1Q15270 411 aaPredicted RBP12.44□□□□□ -0.42
LCN1-201ENST00000263598 EMILIN1Q9Y6C2 1016 aa12.44□□□□□ -0.42
LCN1-201ENST00000263598 C4BP0C0L5 1744 aa12.44□□□□□ -0.42
LCN1-201ENST00000263598 LOC102724428A0A0B4J2F2 783 aa12.43□□□□□ -0.42
LCN1-201ENST00000263598 SIK1P57059 783 aa12.43□□□□□ -0.42
LCN1-201ENST00000263598 CARD14Q9BXL6 1004 aa12.43□□□□□ -0.42
LCN1-201ENST00000263598 TMOD3Q9NYL9 352 aa12.43□□□□□ -0.42
LCN1-201ENST00000263598 WASHC2AQ641Q2 1341 aa12.42□□□□□ -0.42
LCN1-201ENST00000263598 IGSF1Q8N6C5 1336 aa12.42□□□□□ -0.42
LCN1-201ENST00000263598 TAF1LQ8IZX4 1826 aa12.42□□□□□ -0.42
LCN1-201ENST00000263598 AMIGO3Q86WK7 504 aa12.42□□□□□ -0.42
LCN1-201ENST00000263598 ZNF526Q8TF50 670 aaPredicted RBP12.42□□□□□ -0.42
LCN1-201ENST00000263598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.42
LCN1-201ENST00000263598 NCAPD2Q15021 1401 aa12.42□□□□□ -0.42
LCN1-201ENST00000263598 IFFO2Q5TF58 517 aa12.41□□□□□ -0.42
LCN1-201ENST00000263598 PKD1L3Q7Z443 1732 aa12.41□□□□□ -0.42
LCN1-201ENST00000263598 IFNL2Q8IZJ0 200 aa12.41□□□□□ -0.42
LCN1-201ENST00000263598 LINC00116Q8NCU8 138 aa12.41□□□□□ -0.42
LCN1-201ENST00000263598 TOGARAM1Q9Y4F4 1720 aa12.41□□□□□ -0.42
LCN1-201ENST00000263598 ADCY9O60503 1353 aa12.41□□□□□ -0.42
LCN1-201ENST00000263598 GNPATO15228 680 aa12.4□□□□□ -0.42
LCN1-201ENST00000263598 ATP6V1AP38606 617 aa12.4□□□□□ -0.42
LCN1-201ENST00000263598 SMIM5Q71RC9 77 aa12.4□□□□□ -0.42
LCN1-201ENST00000263598 EYA1Q99502 592 aa12.4□□□□□ -0.42
LCN1-201ENST00000263598 ITGB4P16144 1822 aa12.39□□□□□ -0.43
LCN1-201ENST00000263598 PHKG2P15735 406 aa12.39□□□□□ -0.43
LCN1-201ENST00000263598 WWC3Q9ULE0 1092 aa12.39□□□□□ -0.43
LCN1-201ENST00000263598 ASAP1Q9ULH1 1129 aa12.39□□□□□ -0.43
LCN1-201ENST00000263598 CEP350Q5VT06 3117 aa12.39□□□□□ -0.43
LCN1-201ENST00000263598 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
LCN1-201ENST00000263598 HSPA6P17066 643 aa12.38□□□□□ -0.43
LCN1-201ENST00000263598 ITPK1Q13572 414 aa12.38□□□□□ -0.43
LCN1-201ENST00000263598 MMP10P09238 476 aa12.37□□□□□ -0.43
LCN1-201ENST00000263598 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
LCN1-201ENST00000263598 POLKQ9UBT6 870 aa12.37□□□□□ -0.43
LCN1-201ENST00000263598 RTCBQ9Y3I0 505 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms