RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 TWISTNBQ3B726 338 aaPredicted RBP20.28■□□□□ 0.84
VPS26A-201ENST00000263559 LRRC59Q96AG4 307 aaKnown RBP20.28■□□□□ 0.84
VPS26A-201ENST00000263559 AXIN2Q9Y2T1 843 aa20.28■□□□□ 0.84
VPS26A-201ENST00000263559 TRIM27P14373 513 aa20.27■□□□□ 0.84
VPS26A-201ENST00000263559 ZC3H6P61129 1189 aaKnown RBP20.27■□□□□ 0.84
VPS26A-201ENST00000263559 DZIP1LQ8IYY4 767 aaKnown RBP20.27■□□□□ 0.84
VPS26A-201ENST00000263559 RGPD5Q99666 1765 aa20.27■□□□□ 0.84
VPS26A-201ENST00000263559 TNS3Q68CZ2 1445 aa20.27■□□□□ 0.83
VPS26A-201ENST00000263559 ATF7IPQ6VMQ6 1270 aa20.26■□□□□ 0.83
VPS26A-201ENST00000263559 SLAIN2Q9P270 581 aa20.26■□□□□ 0.83
VPS26A-201ENST00000263559 KIF16BQ96L93 1317 aa20.25■□□□□ 0.83
VPS26A-201ENST00000263559 GNAT3A8MTJ3 354 aa20.25■□□□□ 0.83
VPS26A-201ENST00000263559 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
VPS26A-201ENST00000263559 MS4A1P11836 297 aa20.25■□□□□ 0.83
VPS26A-201ENST00000263559 FTSJ3Q8IY81 847 aaKnown RBP20.25■□□□□ 0.83
VPS26A-201ENST00000263559 ANKRD24Q8TF21 1146 aa20.25■□□□□ 0.83
VPS26A-201ENST00000263559 SPATA31A3Q5VYP0 1347 aa20.25■□□□□ 0.83
VPS26A-201ENST00000263559 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
VPS26A-201ENST00000263559 CENPQQ7L2Z9 268 aaPredicted RBP20.24■□□□□ 0.83
VPS26A-201ENST00000263559 MVPQ14764 893 aaKnown RBP20.24■□□□□ 0.83
VPS26A-201ENST00000263559 MRPL50Q8N5N7 158 aaKnown RBP20.24■□□□□ 0.83
VPS26A-201ENST00000263559 CABLES1Q8TDN4 633 aa20.24■□□□□ 0.83
VPS26A-201ENST00000263559 IPO8O15397 1037 aaKnown RBP20.23■□□□□ 0.83
VPS26A-201ENST00000263559 MIS18AQ9NYP9 233 aa20.23■□□□□ 0.83
VPS26A-201ENST00000263559 RBM19Q9Y4C8 960 aaKnown RBP20.23■□□□□ 0.83
VPS26A-201ENST00000263559 KRT24Q2M2I5 525 aa20.22■□□□□ 0.83
VPS26A-201ENST00000263559 MAP3K5Q99683 1374 aa20.22■□□□□ 0.83
VPS26A-201ENST00000263559 TCERG1O14776 1098 aaKnown RBP20.22■□□□□ 0.83
VPS26A-201ENST00000263559 AAMPQ13685 434 aa20.21■□□□□ 0.83
VPS26A-201ENST00000263559 IL17REQ8NFR9 667 aa20.21■□□□□ 0.83
VPS26A-201ENST00000263559 LRRC37A3O60309 1634 aa20.21■□□□□ 0.83
VPS26A-201ENST00000263559 CRYBG1Q9Y4K1 1723 aa20.2■□□□□ 0.82
VPS26A-201ENST00000263559 KIAA0232Q92628 1395 aa20.2■□□□□ 0.82
VPS26A-201ENST00000263559 NCAPD2Q15021 1401 aa20.2■□□□□ 0.82
VPS26A-201ENST00000263559 IGHDP01880 384 aa20.2■□□□□ 0.82
VPS26A-201ENST00000263559 TSPYL4Q9UJ04 414 aa20.2■□□□□ 0.82
VPS26A-201ENST00000263559 CAMTA1Q9Y6Y1 1673 aa20.19■□□□□ 0.82
VPS26A-201ENST00000263559 ERBB3P21860 1342 aa20.19■□□□□ 0.82
VPS26A-201ENST00000263559 COL18A1P39060 1754 aa20.19■□□□□ 0.82
VPS26A-201ENST00000263559 SKAP1Q86WV1 359 aa20.19■□□□□ 0.82
VPS26A-201ENST00000263559 TMEM57Q8N5G2 664 aa20.19■□□□□ 0.82
VPS26A-201ENST00000263559 SOS2Q07890 1332 aaPredicted RBP20.18■□□□□ 0.82
VPS26A-201ENST00000263559 ITPRIPQ8IWB1 547 aa20.18■□□□□ 0.82
VPS26A-201ENST00000263559 ARHGAP45Q92619 1136 aa20.17■□□□□ 0.82
VPS26A-201ENST00000263559 PCDHB15Q9Y5E8 787 aa20.17■□□□□ 0.82
VPS26A-201ENST00000263559 DDX19BQ9UMR2 479 aa20.16■□□□□ 0.82
VPS26A-201ENST00000263559 HAP1P54257 671 aaPredicted RBP20.16■□□□□ 0.82
VPS26A-201ENST00000263559 PLEKHO1Q53GL0 409 aaPredicted RBP20.16■□□□□ 0.82
VPS26A-201ENST00000263559 CHRNA2Q15822 529 aa20.15■□□□□ 0.82
VPS26A-201ENST00000263559 LMO7Q8WWI1 1683 aa20.14■□□□□ 0.81
VPS26A-201ENST00000263559 TAF7Q15545 349 aaPredicted RBP20.14■□□□□ 0.81
VPS26A-201ENST00000263559 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
VPS26A-201ENST00000263559 ZNF530Q6P9A1 599 aaPredicted RBP20.13■□□□□ 0.81
VPS26A-201ENST00000263559 LGR6Q9HBX8 967 aa20.13■□□□□ 0.81
VPS26A-201ENST00000263559 CEMIPQ8WUJ3 1361 aa20.13■□□□□ 0.81
VPS26A-201ENST00000263559 AKAP4Q5JQC9 854 aa20.12■□□□□ 0.81
VPS26A-201ENST00000263559 NLRP2Q9NX02 1062 aa20.12■□□□□ 0.81
VPS26A-201ENST00000263559 CPDO75976 1380 aa20.12■□□□□ 0.81
VPS26A-201ENST00000263559 BABAM1Q9NWV8 329 aa20.11■□□□□ 0.81
VPS26A-201ENST00000263559 ABCC6O95255 1503 aa20.1■□□□□ 0.81
VPS26A-201ENST00000263559 VIRMAQ69YN4 1812 aaKnown RBP20.1■□□□□ 0.81
VPS26A-201ENST00000263559 API5Q9BZZ5 524 aaKnown RBP20.1■□□□□ 0.81
VPS26A-201ENST00000263559 ZBTB40Q9NUA8 1239 aa20.1■□□□□ 0.81
VPS26A-201ENST00000263559 NHSL1Q5SYE7 1610 aa20.09■□□□□ 0.81
VPS26A-201ENST00000263559 ABCC4O15439 1325 aa20.09■□□□□ 0.81
VPS26A-201ENST00000263559 CSB-PGBD3P0DP91 1061 aa20.09■□□□□ 0.81
VPS26A-201ENST00000263559 MPRIPQ6WCQ1 1025 aa20.09■□□□□ 0.81
VPS26A-201ENST00000263559 FAM208AQ9UK61 1670 aaKnown RBP20.09■□□□□ 0.81
VPS26A-201ENST00000263559 C1orf141Q5JVX7 400 aa20.08■□□□□ 0.81
VPS26A-201ENST00000263559 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.8
VPS26A-201ENST00000263559 SLC4A2P04920 1241 aa20.07■□□□□ 0.8
VPS26A-201ENST00000263559 RAPGEF4Q8WZA2 1011 aa20.07■□□□□ 0.8
VPS26A-201ENST00000263559 ZBTB7BO15156 539 aaPredicted RBP20.06■□□□□ 0.8
VPS26A-201ENST00000263559 RNMTO43148 476 aaKnown RBP20.06■□□□□ 0.8
VPS26A-201ENST00000263559 PRDM11Q9NQV5 511 aa20.05■□□□□ 0.8
VPS26A-201ENST00000263559 ABCA3Q99758 1704 aa20.05■□□□□ 0.8
VPS26A-201ENST00000263559 TEFQ10587 303 aa20.05■□□□□ 0.8
VPS26A-201ENST00000263559 RGS12O14924 1447 aa20.04■□□□□ 0.8
VPS26A-201ENST00000263559 TATP17735 454 aaPredicted RBP20.04■□□□□ 0.8
VPS26A-201ENST00000263559 RGS3P49796 1198 aa20.04■□□□□ 0.8
VPS26A-201ENST00000263559 KDM3BQ7LBC6 1761 aa20.04■□□□□ 0.8
VPS26A-201ENST00000263559 PTPRCP08575 1304 aa20.03■□□□□ 0.8
VPS26A-201ENST00000263559 MEGF6O75095 1541 aa20.03■□□□□ 0.8
VPS26A-201ENST00000263559 PDE4AP27815 886 aa20.02■□□□□ 0.8
VPS26A-201ENST00000263559 G2E3Q7L622 706 aa20.02■□□□□ 0.8
VPS26A-201ENST00000263559 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.8
VPS26A-201ENST00000263559 HDAC1Q13547 482 aaPredicted RBP20.02■□□□□ 0.8
VPS26A-201ENST00000263559 BTBD11A6QL63 1104 aa20.01■□□□□ 0.79
VPS26A-201ENST00000263559 CCDC30Q5VVM6 783 aa20.01■□□□□ 0.79
VPS26A-201ENST00000263559 CHMP4BQ9H444 224 aaKnown RBP20.01■□□□□ 0.79
VPS26A-201ENST00000263559 OVOS2A0A0G2JMS6 1433 aa20.01■□□□□ 0.79
VPS26A-201ENST00000263559 KCNQ3O43525 872 aa20.01■□□□□ 0.79
VPS26A-201ENST00000263559 EIF4A1P60842 406 aaKnown RBP20.01■□□□□ 0.79
VPS26A-201ENST00000263559 NECTIN2Q92692 538 aa20.01■□□□□ 0.79
VPS26A-201ENST00000263559 STK31Q9BXU1 1019 aa20.01■□□□□ 0.79
VPS26A-201ENST00000263559 INTS3Q68E01 1043 aaKnown RBP20■□□□□ 0.79
VPS26A-201ENST00000263559 CACNA1FO60840 1977 aa20■□□□□ 0.79
VPS26A-201ENST00000263559 SPG7Q9UQ90 795 aa20■□□□□ 0.79
VPS26A-201ENST00000263559 ADAMTS7Q9UKP4 1686 aa20■□□□□ 0.79
VPS26A-201ENST00000263559 LTBP4Q8N2S1 1624 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms