RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 ZNHIT6Q9NWK9 470 aaKnown RBP11.54□□□□□ -0.56
CIT-201ENST00000261833 MYO10Q9HD67 2058 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 CAVIN2O95810 425 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 PPFIBP1Q86W92 1011 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 TNPO1Q92973 898 aaKnown RBP11.53□□□□□ -0.56
CIT-201ENST00000261833 TMCO3Q6UWJ1 677 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 SPATA32Q96LK8 384 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 GBP3Q9H0R5 595 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 ITSN1Q15811 1721 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 CASQ1P31415 396 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 CBX1P83916 185 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 TIGD1Q96MW7 591 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 TBC1D2Q9BYX2 928 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 MRC2Q9UBG0 1479 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 CLASRPQ8N2M8 674 aaKnown RBP11.53□□□□□ -0.56
CIT-201ENST00000261833 INCENPQ9NQS7 918 aa11.53□□□□□ -0.56
CIT-201ENST00000261833 NBPF1Q3BBV0 1214 aa11.52□□□□□ -0.56
CIT-201ENST00000261833 SYTL4Q96C24 671 aaPredicted RBP11.52□□□□□ -0.56
CIT-201ENST00000261833 BCL11BQ9C0K0 894 aaPredicted RBP11.52□□□□□ -0.56
CIT-201ENST00000261833 TRPM1Q7Z4N2 1603 aa11.52□□□□□ -0.56
CIT-201ENST00000261833 SNAPC4Q5SXM2 1469 aa11.52□□□□□ -0.57
CIT-201ENST00000261833 SAMD9Q5K651 1589 aa11.52□□□□□ -0.57
CIT-201ENST00000261833 ALDH1L2Q3SY69 923 aa11.52□□□□□ -0.57
CIT-201ENST00000261833 ZSCAN31Q96LW9 406 aaPredicted RBP11.52□□□□□ -0.57
CIT-201ENST00000261833 CTAGE5O15320 804 aa11.52□□□□□ -0.57
CIT-201ENST00000261833 CEP57L1Q8IYX8 460 aa11.52□□□□□ -0.57
CIT-201ENST00000261833 ZSCAN12O43309 604 aa11.51□□□□□ -0.57
CIT-201ENST00000261833 SART3Q15020 963 aaKnown RBP11.51□□□□□ -0.57
CIT-201ENST00000261833 ME1P48163 572 aa11.51□□□□□ -0.57
CIT-201ENST00000261833 MYH2Q9UKX2 1941 aa11.51□□□□□ -0.57
CIT-201ENST00000261833 GSDMDP57764 484 aa11.51□□□□□ -0.57
CIT-201ENST00000261833 STIM1Q13586 685 aa11.51□□□□□ -0.57
CIT-201ENST00000261833 MYH1P12882 1939 aa11.51□□□□□ -0.57
CIT-201ENST00000261833 MYH4Q9Y623 1939 aa11.51□□□□□ -0.57
CIT-201ENST00000261833 MAGI1Q96QZ7 1491 aaPredicted RBP11.51□□□□□ -0.57
CIT-201ENST00000261833 KLHL40Q2TBA0 621 aa11.51□□□□□ -0.57
CIT-201ENST00000261833 LARP1BQ659C4 914 aaKnown RBP11.51□□□□□ -0.57
CIT-201ENST00000261833 UBXN4Q92575 508 aa11.51□□□□□ -0.57
CIT-201ENST00000261833 ZNF644Q9H582 1327 aaPredicted RBP11.51□□□□□ -0.57
CIT-201ENST00000261833 CHD4Q14839 1912 aa11.51□□□□□ -0.57
CIT-201ENST00000261833 KIAA0556O60303 1618 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 UVSSAQ2YD98 709 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 SCAF11Q99590 1463 aaKnown RBP11.5□□□□□ -0.57
CIT-201ENST00000261833 PRDM10Q9NQV6 1147 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 NSD2O96028 1365 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.5□□□□□ -0.57
CIT-201ENST00000261833 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 ZSCAN23Q3MJ62 389 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 TTC5Q8N0Z6 440 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
CIT-201ENST00000261833 HMOX1P09601 288 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 FOSBP53539 338 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 FILIP1Q7Z7B0 1213 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 C1orf115Q9H7X2 142 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 WDR62O43379 1518 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 KRT32Q14532 448 aa11.5□□□□□ -0.57
CIT-201ENST00000261833 TWISTNBQ3B726 338 aaPredicted RBP11.5□□□□□ -0.57
CIT-201ENST00000261833 CDKL5O76039 1030 aa11.49□□□□□ -0.57
CIT-201ENST00000261833 CCDC148Q8NFR7 591 aa11.49□□□□□ -0.57
CIT-201ENST00000261833 PPP6R1Q9UPN7 881 aa11.49□□□□□ -0.57
CIT-201ENST00000261833 CCDC184Q52MB2 194 aa11.49□□□□□ -0.57
CIT-201ENST00000261833 CCDC94Q9BW85 323 aaPredicted RBP11.49□□□□□ -0.57
CIT-201ENST00000261833 TTLL5Q6EMB2 1281 aa11.49□□□□□ -0.57
CIT-201ENST00000261833 TSPOAP1O95153 1857 aa11.49□□□□□ -0.57
CIT-201ENST00000261833 ARHGEF11O15085 1522 aa11.49□□□□□ -0.57
CIT-201ENST00000261833 NOL10Q9BSC4 688 aaKnown RBP11.49□□□□□ -0.57
CIT-201ENST00000261833 KAT6AQ92794 2004 aa11.49□□□□□ -0.57
CIT-201ENST00000261833 FSD1Q9BTV5 496 aa11.48□□□□□ -0.57
CIT-201ENST00000261833 UPF3BQ9BZI7 483 aaKnown RBP11.48□□□□□ -0.57
CIT-201ENST00000261833 CCDC171Q6TFL3 1326 aa11.48□□□□□ -0.57
CIT-201ENST00000261833 SHTN1A0MZ66 631 aa11.48□□□□□ -0.57
CIT-201ENST00000261833 CASTP20810 708 aaKnown RBP11.48□□□□□ -0.57
CIT-201ENST00000261833 NBPF8Q3BBV2 869 aa11.48□□□□□ -0.57
CIT-201ENST00000261833 SH2B1Q9NRF2 756 aaPredicted RBP11.48□□□□□ -0.57
CIT-201ENST00000261833 GOLGA6L9A6NEM1 432 aa11.48□□□□□ -0.57
CIT-201ENST00000261833 SFPQP23246 707 aaKnown RBP eCLIP11.48□□□□□ -0.57
CIT-201ENST00000261833 UBE2HP62256 183 aa11.48□□□□□ -0.57
CIT-201ENST00000261833 STK38Q15208 465 aa11.48□□□□□ -0.57
CIT-201ENST00000261833 NUTM2DQ5VT03 806 aaPredicted RBP11.48□□□□□ -0.57
CIT-201ENST00000261833 LAMC1P11047 1609 aa11.48□□□□□ -0.57
CIT-201ENST00000261833 EIF2S2P20042 333 aaKnown RBP11.48□□□□□ -0.57
CIT-201ENST00000261833 XPCQ01831 940 aaPredicted RBP11.48□□□□□ -0.57
CIT-201ENST00000261833 GIMAP7Q8NHV1 300 aa11.48□□□□□ -0.57
CIT-201ENST00000261833 MYH13Q9UKX3 1938 aa11.48□□□□□ -0.57
CIT-201ENST00000261833 CCDC181Q5TID7 509 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 LRSAM1Q6UWE0 723 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 SCAND2PQ9GZW5 306 aaPredicted RBP11.47□□□□□ -0.57
CIT-201ENST00000261833 CLIP2Q9UDT6 1046 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 GAS2L2Q8NHY3 880 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 ADCY5O95622 1261 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 EXOSC9Q06265 439 aaKnown RBP11.47□□□□□ -0.57
CIT-201ENST00000261833 NUP160Q12769 1436 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 HSP90AB3PQ58FF7 597 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 RAB11FIP3O75154 756 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 ODF2Q5BJF6 829 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 MICALCLQ6ZW33 695 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 ATAD2Q6PL18 1390 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 IVLP07476 585 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 BMP2KLQ5H9B9 411 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms