RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 CNGB1Q14028 1251 aaPredicted RBP15.74■□□□□ 0.11
PFDN1-201ENST00000261813 LARP1Q6PKG0 1096 aaKnown RBP15.74■□□□□ 0.11
PFDN1-201ENST00000261813 GJD4Q96KN9 370 aaPredicted RBP15.74■□□□□ 0.11
PFDN1-201ENST00000261813 POLKQ9UBT6 870 aa15.74■□□□□ 0.11
PFDN1-201ENST00000261813 BLMP54132 1417 aaPredicted RBP15.73■□□□□ 0.11
PFDN1-201ENST00000261813 CCDC9Q9Y3X0 531 aaKnown RBP15.73■□□□□ 0.11
PFDN1-201ENST00000261813 SPATA31A5Q5VU36 1347 aa15.72■□□□□ 0.11
PFDN1-201ENST00000261813 SPATA31A7Q8IWB4 1347 aa15.72■□□□□ 0.11
PFDN1-201ENST00000261813 FLT4P35916 1363 aa15.72■□□□□ 0.11
PFDN1-201ENST00000261813 KIF24Q5T7B8 1368 aa15.72■□□□□ 0.11
PFDN1-201ENST00000261813 SPOCK2Q92563 424 aa15.72■□□□□ 0.11
PFDN1-201ENST00000261813 SMG6Q86US8 1419 aaKnown RBP15.71■□□□□ 0.11
PFDN1-201ENST00000261813 ERBB3P21860 1342 aa15.71■□□□□ 0.11
PFDN1-201ENST00000261813 WDR17Q8IZU2 1322 aa15.71■□□□□ 0.11
PFDN1-201ENST00000261813 MAP2P11137 1827 aaKnown RBP15.71■□□□□ 0.11
PFDN1-201ENST00000261813 ANKRD24Q8TF21 1146 aa15.71■□□□□ 0.11
PFDN1-201ENST00000261813 CRB1P82279 1406 aa15.71■□□□□ 0.1
PFDN1-201ENST00000261813 SRCAPQ6ZRS2 3230 aa15.71■□□□□ 0.1
PFDN1-201ENST00000261813 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
PFDN1-201ENST00000261813 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
PFDN1-201ENST00000261813 FAM212AQ96EL1 285 aa15.7■□□□□ 0.1
PFDN1-201ENST00000261813 INSRP06213 1382 aa15.69■□□□□ 0.1
PFDN1-201ENST00000261813 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
PFDN1-201ENST00000261813 CSB-PGBD3P0DP91 1061 aa15.69■□□□□ 0.1
PFDN1-201ENST00000261813 PHF12Q96QT6 1004 aa15.69■□□□□ 0.1
PFDN1-201ENST00000261813 TOM1L2Q6ZVM7 507 aa15.68■□□□□ 0.1
PFDN1-201ENST00000261813 LTV1Q96GA3 475 aaPredicted RBP15.68■□□□□ 0.1
PFDN1-201ENST00000261813 USP35Q9P2H5 1018 aa15.68■□□□□ 0.1
PFDN1-201ENST00000261813 FAM98CQ17RN3 349 aaKnown RBP15.66■□□□□ 0.1
PFDN1-201ENST00000261813 PARD3Q8TEW0 1356 aa15.66■□□□□ 0.1
PFDN1-201ENST00000261813 ONECUT3O60422 494 aaPredicted RBP15.65■□□□□ 0.1
PFDN1-201ENST00000261813 TCP11L2Q8N4U5 519 aa15.65■□□□□ 0.1
PFDN1-201ENST00000261813 CARD10Q9BWT7 1032 aa15.65■□□□□ 0.1
PFDN1-201ENST00000261813 FAM208AQ9UK61 1670 aaKnown RBP15.65■□□□□ 0.1
PFDN1-201ENST00000261813 THSD7AQ9UPZ6 1657 aa15.65■□□□□ 0.1
PFDN1-201ENST00000261813 MTHFSP49914 203 aa15.64■□□□□ 0.09
PFDN1-201ENST00000261813 NLRP2Q9NX02 1062 aa15.64■□□□□ 0.09
PFDN1-201ENST00000261813 BARGINQ6ZT62 677 aa15.63■□□□□ 0.09
PFDN1-201ENST00000261813 THRAP3Q9Y2W1 955 aaKnown RBP15.63■□□□□ 0.09
PFDN1-201ENST00000261813 RGPD2P0DJD1 1756 aa15.63■□□□□ 0.09
PFDN1-201ENST00000261813 PPP2R1AP30153 589 aa15.62■□□□□ 0.09
PFDN1-201ENST00000261813 SF3B2Q13435 895 aaKnown RBP15.62■□□□□ 0.09
PFDN1-201ENST00000261813 EIF4A2Q14240 407 aaKnown RBP15.62■□□□□ 0.09
PFDN1-201ENST00000261813 NBPF6Q5VWK0 638 aa15.62■□□□□ 0.09
PFDN1-201ENST00000261813 SEPT12Q8IYM1 358 aa15.62■□□□□ 0.09
PFDN1-201ENST00000261813 NBPF4Q96M43 638 aa15.62■□□□□ 0.09
PFDN1-201ENST00000261813 WNK3Q9BYP7 1800 aa15.62■□□□□ 0.09
PFDN1-201ENST00000261813 ANP32CO43423 234 aa15.62■□□□□ 0.09
PFDN1-201ENST00000261813 KIF12Q96FN5 646 aa15.62■□□□□ 0.09
PFDN1-201ENST00000261813 DISP2A7MBM2 1401 aa15.61■□□□□ 0.09
PFDN1-201ENST00000261813 EP400Q96L91 3159 aa15.61■□□□□ 0.09
PFDN1-201ENST00000261813 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
PFDN1-201ENST00000261813 COL3A1P02461 1466 aaPredicted RBP15.6■□□□□ 0.09
PFDN1-201ENST00000261813 A0A0G2JS52 829 aa15.6■□□□□ 0.09
PFDN1-201ENST00000261813 MYT1Q01538 1121 aa15.6■□□□□ 0.09
PFDN1-201ENST00000261813 GSE1Q14687 1217 aa15.6■□□□□ 0.09
PFDN1-201ENST00000261813 NCAPD2Q15021 1401 aa15.59■□□□□ 0.09
PFDN1-201ENST00000261813 RALBP1Q15311 655 aa15.59■□□□□ 0.09
PFDN1-201ENST00000261813 DCAF8Q5TAQ9 597 aa15.59■□□□□ 0.09
PFDN1-201ENST00000261813 EYA1Q99502 592 aa15.59■□□□□ 0.09
PFDN1-201ENST00000261813 PARP4Q9UKK3 1724 aaKnown RBP15.59■□□□□ 0.09
PFDN1-201ENST00000261813 LRRC37A3O60309 1634 aa15.58■□□□□ 0.09
PFDN1-201ENST00000261813 BRWD3Q6RI45 1802 aa15.58■□□□□ 0.08
PFDN1-201ENST00000261813 IL13P35225 146 aa15.58■□□□□ 0.08
PFDN1-201ENST00000261813 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.08
PFDN1-201ENST00000261813 IL2RBP14784 551 aa15.57■□□□□ 0.08
PFDN1-201ENST00000261813 MEGF6O75095 1541 aa15.57■□□□□ 0.08
PFDN1-201ENST00000261813 RGPD1P0DJD0 1748 aa15.56■□□□□ 0.08
PFDN1-201ENST00000261813 IGSF1Q8N6C5 1336 aa15.56■□□□□ 0.08
PFDN1-201ENST00000261813 GALR2O43603 387 aaPredicted RBP15.56■□□□□ 0.08
PFDN1-201ENST00000261813 CDCA7Q9BWT1 371 aaPredicted RBP15.56■□□□□ 0.08
PFDN1-201ENST00000261813 DIAPH1O60610 1272 aaKnown RBP15.55■□□□□ 0.08
PFDN1-201ENST00000261813 KRT27Q7Z3Y8 459 aa15.55■□□□□ 0.08
PFDN1-201ENST00000261813 MYBBP1AQ9BQG0 1328 aaKnown RBP15.54■□□□□ 0.08
PFDN1-201ENST00000261813 DEFB132Q7Z7B7 95 aa15.54■□□□□ 0.08
PFDN1-201ENST00000261813 TNS2Q63HR2 1409 aa15.54■□□□□ 0.08
PFDN1-201ENST00000261813 DDB1Q16531 1140 aa15.53■□□□□ 0.08
PFDN1-201ENST00000261813 CFAP53Q96M91 514 aa15.53■□□□□ 0.08
PFDN1-201ENST00000261813 OVOS2A0A0G2JMS6 1433 aa15.53■□□□□ 0.08
PFDN1-201ENST00000261813 FAM182BQ5T319 152 aa15.52■□□□□ 0.08
PFDN1-201ENST00000261813 MS4A3Q96HJ5 214 aa15.52■□□□□ 0.08
PFDN1-201ENST00000261813 SGIP1Q9BQI5 828 aa15.52■□□□□ 0.08
PFDN1-201ENST00000261813 EXOC5O00471 708 aa15.51■□□□□ 0.07
PFDN1-201ENST00000261813 MAP3K13O43283 966 aa15.51■□□□□ 0.07
PFDN1-201ENST00000261813 AEBP1Q8IUX7 1158 aa15.51■□□□□ 0.07
PFDN1-201ENST00000261813 RAPGEF4Q8WZA2 1011 aa15.51■□□□□ 0.07
PFDN1-201ENST00000261813 KDRP35968 1356 aa15.51■□□□□ 0.07
PFDN1-201ENST00000261813 TATP17735 454 aaPredicted RBP15.5■□□□□ 0.07
PFDN1-201ENST00000261813 BAG6P46379 1132 aa15.5■□□□□ 0.07
PFDN1-201ENST00000261813 PDE3BQ13370 1112 aa15.5■□□□□ 0.07
PFDN1-201ENST00000261813 SULT6B1Q6IMI4 303 aa15.5■□□□□ 0.07
PFDN1-201ENST00000261813 SHANK3Q9BYB0 1731 aa15.5■□□□□ 0.07
PFDN1-201ENST00000261813 MARCH10Q8NA82 808 aaPredicted RBP15.49■□□□□ 0.07
PFDN1-201ENST00000261813 CCER2I3L3R5 266 aa15.49■□□□□ 0.07
PFDN1-201ENST00000261813 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
PFDN1-201ENST00000261813 HMOX1P09601 288 aa15.49■□□□□ 0.07
PFDN1-201ENST00000261813 CHRM1P11229 460 aaPredicted RBP15.49■□□□□ 0.07
PFDN1-201ENST00000261813 ZCRB1Q8TBF4 217 aaKnown RBP15.48■□□□□ 0.07
PFDN1-201ENST00000261813 PKD1L3Q7Z443 1732 aa15.48■□□□□ 0.07
PFDN1-201ENST00000261813 DDX54Q8TDD1 881 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms