RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 AEBP2Q6ZN18 517 aaPredicted RBP16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 C16orf45Q96MC5 204 aaPredicted RBP16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 TIGD1Q96MW7 591 aa16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 SPAG9O60271 1321 aaKnown RBP16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 GIMAP6Q6P9H5 292 aa16.04■□□□□ 0.16
TUBGCP4-201ENST00000260383 CFAP44Q96MT7 982 aa16.04■□□□□ 0.16
TUBGCP4-201ENST00000260383 CCDC66A2RUB6 948 aa16.04■□□□□ 0.16
TUBGCP4-201ENST00000260383 PTGS1P23219 599 aa16.04■□□□□ 0.16
TUBGCP4-201ENST00000260383 PAXIP1Q6ZW49 1069 aaPredicted RBP16.04■□□□□ 0.16
TUBGCP4-201ENST00000260383 CNPY2Q9Y2B0 182 aa16.04■□□□□ 0.16
TUBGCP4-201ENST00000260383 TCHHQ07283 1943 aa16.04■□□□□ 0.16
TUBGCP4-201ENST00000260383 PIK3R4Q99570 1358 aa16.03■□□□□ 0.16
TUBGCP4-201ENST00000260383 REC8O95072 547 aa16.03■□□□□ 0.16
TUBGCP4-201ENST00000260383 TRAK1Q9UPV9 953 aa16.03■□□□□ 0.16
TUBGCP4-201ENST00000260383 VAMP4O75379 141 aa16.03■□□□□ 0.16
TUBGCP4-201ENST00000260383 BRPF1P55201 1214 aaPredicted RBP16.03■□□□□ 0.16
TUBGCP4-201ENST00000260383 CASC1Q6TDU7 716 aa16.03■□□□□ 0.16
TUBGCP4-201ENST00000260383 TRERF1Q96PN7 1200 aa16.03■□□□□ 0.16
TUBGCP4-201ENST00000260383 PALD1Q9ULE6 856 aa16.03■□□□□ 0.16
TUBGCP4-201ENST00000260383 TRPM2O94759 1503 aa16.02■□□□□ 0.16
TUBGCP4-201ENST00000260383 ERC2O15083 957 aa16.02■□□□□ 0.16
TUBGCP4-201ENST00000260383 FUCA2Q9BTY2 467 aa16.02■□□□□ 0.16
TUBGCP4-201ENST00000260383 PREX2Q70Z35 1606 aa16.02■□□□□ 0.16
TUBGCP4-201ENST00000260383 LRMPQ12912 555 aa16.02■□□□□ 0.15
TUBGCP4-201ENST00000260383 SYCP1Q15431 976 aa16.02■□□□□ 0.15
TUBGCP4-201ENST00000260383 ST7Q9NRC1 585 aa16.02■□□□□ 0.15
TUBGCP4-201ENST00000260383 ABCC4O15439 1325 aa16.02■□□□□ 0.15
TUBGCP4-201ENST00000260383 DNAJC2Q99543 621 aaKnown RBP16.01■□□□□ 0.15
TUBGCP4-201ENST00000260383 SRCIN1Q9C0H9 1055 aa16.01■□□□□ 0.15
TUBGCP4-201ENST00000260383 SMTNL1A8MU46 457 aa16.01■□□□□ 0.15
TUBGCP4-201ENST00000260383 SLC20A2Q08357 652 aa16.01■□□□□ 0.15
TUBGCP4-201ENST00000260383 ABCA6Q8N139 1617 aa16.01■□□□□ 0.15
TUBGCP4-201ENST00000260383 PTCH1Q13635 1447 aa16.01■□□□□ 0.15
TUBGCP4-201ENST00000260383 TRAPPC8Q9Y2L5 1435 aa16.01■□□□□ 0.15
TUBGCP4-201ENST00000260383 TULP2O00295 520 aa16■□□□□ 0.15
TUBGCP4-201ENST00000260383 CERS3Q8IU89 383 aa16■□□□□ 0.15
TUBGCP4-201ENST00000260383 ARHGAP45Q92619 1136 aa16■□□□□ 0.15
TUBGCP4-201ENST00000260383 THUMPD2Q9BTF0 503 aaKnown RBP16■□□□□ 0.15
TUBGCP4-201ENST00000260383 KIAA1210Q9ULL0 1709 aa16■□□□□ 0.15
TUBGCP4-201ENST00000260383 KRT222Q8N1A0 295 aa16■□□□□ 0.15
TUBGCP4-201ENST00000260383 SBNO2Q9Y2G9 1366 aa16■□□□□ 0.15
TUBGCP4-201ENST00000260383 KNDC1Q76NI1 1749 aa16■□□□□ 0.15
TUBGCP4-201ENST00000260383 TNNT1P13805 278 aa15.99■□□□□ 0.15
TUBGCP4-201ENST00000260383 KMT5BQ4FZB7 885 aa15.99■□□□□ 0.15
TUBGCP4-201ENST00000260383 INTS4Q96HW7 963 aaKnown RBP15.99■□□□□ 0.15
TUBGCP4-201ENST00000260383 ARHGAP5Q13017 1502 aa15.99■□□□□ 0.15
TUBGCP4-201ENST00000260383 TPM3P06753 285 aa15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 UPF3BQ9BZI7 483 aaKnown RBP15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 V9GYY5 206 aaPredicted RBP15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 TRIM6-TRIM34B2RNG4 842 aa15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 TMEM87AQ8NBN3 555 aa15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 TRIM34Q9BYJ4 488 aa15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 NRBP1Q9UHY1 535 aa15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 UHRF1BP1LA0JNW5 1464 aa15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 WDR33Q9C0J8 1336 aaKnown RBP15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 MCM2P49736 904 aa15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 CCDC186Q7Z3E2 898 aa15.98■□□□□ 0.15
TUBGCP4-201ENST00000260383 RPAP1Q9BWH6 1393 aaPredicted RBP15.97■□□□□ 0.15
TUBGCP4-201ENST00000260383 CCDC112Q8NEF3 446 aa15.97■□□□□ 0.15
TUBGCP4-201ENST00000260383 GOLGA6L6A8MZA4 724 aa15.97■□□□□ 0.15
TUBGCP4-201ENST00000260383 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
TUBGCP4-201ENST00000260383 ZCCHC11Q5TAX3 1644 aaKnown RBP15.96■□□□□ 0.15
TUBGCP4-201ENST00000260383 UBE2HP62256 183 aa15.96■□□□□ 0.15
TUBGCP4-201ENST00000260383 RBM6P78332 1123 aaKnown RBP15.96■□□□□ 0.15
TUBGCP4-201ENST00000260383 MAP3K4Q9Y6R4 1608 aa15.96■□□□□ 0.14
TUBGCP4-201ENST00000260383 FIBPO43427 364 aa15.96■□□□□ 0.14
TUBGCP4-201ENST00000260383 ZNF428Q96B54 188 aa15.96■□□□□ 0.14
TUBGCP4-201ENST00000260383 FAM53CQ9NYF3 392 aa15.96■□□□□ 0.14
TUBGCP4-201ENST00000260383 CALCOCO1Q9P1Z2 691 aa15.96■□□□□ 0.14
TUBGCP4-201ENST00000260383 ZNF592Q92610 1267 aa15.95■□□□□ 0.14
TUBGCP4-201ENST00000260383 DTNBO60941 627 aa15.95■□□□□ 0.14
TUBGCP4-201ENST00000260383 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
TUBGCP4-201ENST00000260383 RTL1A6NKG5 1358 aa15.94■□□□□ 0.14
TUBGCP4-201ENST00000260383 COL3A1P02461 1466 aaPredicted RBP15.94■□□□□ 0.14
TUBGCP4-201ENST00000260383 ANKRD44Q8N8A2 993 aa15.94■□□□□ 0.14
TUBGCP4-201ENST00000260383 UGGT1Q9NYU2 1555 aa15.94■□□□□ 0.14
TUBGCP4-201ENST00000260383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.94■□□□□ 0.14
TUBGCP4-201ENST00000260383 MYO3AQ8NEV4 1616 aa15.94■□□□□ 0.14
TUBGCP4-201ENST00000260383 USP32Q8NFA0 1604 aa15.94■□□□□ 0.14
TUBGCP4-201ENST00000260383 TMEM132EQ6IEE7 984 aa15.94■□□□□ 0.14
TUBGCP4-201ENST00000260383 ZNF397Q8NF99 534 aaPredicted RBP15.94■□□□□ 0.14
TUBGCP4-201ENST00000260383 FBXO38Q6PIJ6 1188 aa15.93■□□□□ 0.14
TUBGCP4-201ENST00000260383 ZNF215Q9UL58 517 aaPredicted RBP15.93■□□□□ 0.14
TUBGCP4-201ENST00000260383 PAXBP1Q9Y5B6 917 aa15.93■□□□□ 0.14
TUBGCP4-201ENST00000260383 HNRNPH2P55795 449 aaKnown RBP15.93■□□□□ 0.14
TUBGCP4-201ENST00000260383 LUZP1Q86V48 1076 aa15.93■□□□□ 0.14
TUBGCP4-201ENST00000260383 ZBTB9Q96C00 473 aa15.93■□□□□ 0.14
TUBGCP4-201ENST00000260383 KRT24Q2M2I5 525 aa15.92■□□□□ 0.14
TUBGCP4-201ENST00000260383 CEP85Q6P2H3 762 aa15.92■□□□□ 0.14
TUBGCP4-201ENST00000260383 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
TUBGCP4-201ENST00000260383 RTF1Q92541 710 aaKnown RBP15.92■□□□□ 0.14
TUBGCP4-201ENST00000260383 ATP10DQ9P241 1426 aa15.92■□□□□ 0.14
TUBGCP4-201ENST00000260383 TPD52L1Q16890 204 aaPredicted RBP15.92■□□□□ 0.14
TUBGCP4-201ENST00000260383 ZSCAN25Q6NSZ9 544 aa15.92■□□□□ 0.14
TUBGCP4-201ENST00000260383 C8orf58Q8NAV2 365 aa15.92■□□□□ 0.14
TUBGCP4-201ENST00000260383 LARP6Q9BRS8 491 aaKnown RBP15.92■□□□□ 0.14
TUBGCP4-201ENST00000260383 ESYT1Q9BSJ8 1104 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms