RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 BARGINQ6ZT62 677 aa20.92■□□□□ 0.94
CCDC90B-201ENST00000260054 WNK3Q9BYP7 1800 aa20.91■□□□□ 0.94
CCDC90B-201ENST00000260054 NEFMP07197 916 aa20.91■□□□□ 0.94
CCDC90B-201ENST00000260054 MTHFSDQ2M296 383 aaKnown RBP20.9■□□□□ 0.94
CCDC90B-201ENST00000260054 PARP4Q9UKK3 1724 aaKnown RBP20.9■□□□□ 0.94
CCDC90B-201ENST00000260054 PLEKHG2Q9H7P9 1386 aa20.9■□□□□ 0.94
CCDC90B-201ENST00000260054 FAM98CQ17RN3 349 aaKnown RBP20.89■□□□□ 0.94
CCDC90B-201ENST00000260054 PLEKHO1Q53GL0 409 aaPredicted RBP20.89■□□□□ 0.93
CCDC90B-201ENST00000260054 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
CCDC90B-201ENST00000260054 RRP7AQ9Y3A4 280 aaKnown RBP20.89■□□□□ 0.93
CCDC90B-201ENST00000260054 AMOTQ4VCS5 1084 aa20.88■□□□□ 0.93
CCDC90B-201ENST00000260054 PKD1L3Q7Z443 1732 aa20.87■□□□□ 0.93
CCDC90B-201ENST00000260054 TMPOP42166 694 aaKnown RBP20.87■□□□□ 0.93
CCDC90B-201ENST00000260054 CDCA7Q9BWT1 371 aaPredicted RBP20.87■□□□□ 0.93
CCDC90B-201ENST00000260054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.87■□□□□ 0.93
CCDC90B-201ENST00000260054 NFE2L2Q16236 605 aa20.86■□□□□ 0.93
CCDC90B-201ENST00000260054 HNRNPUQ00839 825 aaKnown RBP eCLIP20.86■□□□□ 0.93
CCDC90B-201ENST00000260054 NEUROD2Q15784 382 aa20.86■□□□□ 0.93
CCDC90B-201ENST00000260054 GAS2L2Q8NHY3 880 aa20.86■□□□□ 0.93
CCDC90B-201ENST00000260054 ZCRB1Q8TBF4 217 aaKnown RBP20.86■□□□□ 0.93
CCDC90B-201ENST00000260054 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
CCDC90B-201ENST00000260054 ZNF530Q6P9A1 599 aaPredicted RBP20.85■□□□□ 0.93
CCDC90B-201ENST00000260054 YTHDC1Q96MU7 727 aaKnown RBP20.85■□□□□ 0.93
CCDC90B-201ENST00000260054 THSD7AQ9UPZ6 1657 aa20.85■□□□□ 0.93
CCDC90B-201ENST00000260054 ONECUT3O60422 494 aaPredicted RBP20.84■□□□□ 0.93
CCDC90B-201ENST00000260054 SALL2Q9Y467 1007 aaPredicted RBP20.84■□□□□ 0.93
CCDC90B-201ENST00000260054 LRRC37A3O60309 1634 aa20.84■□□□□ 0.93
CCDC90B-201ENST00000260054 RIPK4P57078 832 aa20.83■□□□□ 0.93
CCDC90B-201ENST00000260054 RBM6P78332 1123 aaKnown RBP20.83■□□□□ 0.93
CCDC90B-201ENST00000260054 TNS2Q63HR2 1409 aa20.83■□□□□ 0.93
CCDC90B-201ENST00000260054 POTEAQ6S8J7 498 aa20.83■□□□□ 0.93
CCDC90B-201ENST00000260054 SHANK3Q9BYB0 1731 aa20.83■□□□□ 0.93
CCDC90B-201ENST00000260054 CYP27B1O15528 508 aa20.83■□□□□ 0.92
CCDC90B-201ENST00000260054 EXOC5O00471 708 aa20.82■□□□□ 0.92
CCDC90B-201ENST00000260054 DDB1Q16531 1140 aa20.82■□□□□ 0.92
CCDC90B-201ENST00000260054 PCDH11XQ9BZA7 1347 aa20.82■□□□□ 0.92
CCDC90B-201ENST00000260054 PCDH11YQ9BZA8 1340 aa20.82■□□□□ 0.92
CCDC90B-201ENST00000260054 DLG5Q8TDM6 1919 aa20.81■□□□□ 0.92
CCDC90B-201ENST00000260054 A0A0G2JS52 829 aa20.81■□□□□ 0.92
CCDC90B-201ENST00000260054 MYT1Q01538 1121 aa20.81■□□□□ 0.92
CCDC90B-201ENST00000260054 PHKG2P15735 406 aa20.8■□□□□ 0.92
CCDC90B-201ENST00000260054 AKAP4Q5JQC9 854 aa20.8■□□□□ 0.92
CCDC90B-201ENST00000260054 DDX54Q8TDD1 881 aaKnown RBP20.8■□□□□ 0.92
CCDC90B-201ENST00000260054 TRIM35Q9UPQ4 493 aa20.8■□□□□ 0.92
CCDC90B-201ENST00000260054 MAP3K5Q99683 1374 aa20.8■□□□□ 0.92
CCDC90B-201ENST00000260054 RXRBP28702 533 aa20.8■□□□□ 0.92
CCDC90B-201ENST00000260054 C1orf141Q5JVX7 400 aa20.8■□□□□ 0.92
CCDC90B-201ENST00000260054 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
CCDC90B-201ENST00000260054 GNAT3A8MTJ3 354 aa20.79■□□□□ 0.92
CCDC90B-201ENST00000260054 NCBP3Q53F19 620 aaKnown RBP20.79■□□□□ 0.92
CCDC90B-201ENST00000260054 SEPT12Q8IYM1 358 aa20.79■□□□□ 0.92
CCDC90B-201ENST00000260054 DCTN1Q14203 1278 aa20.77■□□□□ 0.92
CCDC90B-201ENST00000260054 CCDC27Q2M243 656 aa20.77■□□□□ 0.92
CCDC90B-201ENST00000260054 NGEFQ8N5V2 710 aa20.77■□□□□ 0.92
CCDC90B-201ENST00000260054 WWC1Q8IX03 1113 aa20.77■□□□□ 0.91
CCDC90B-201ENST00000260054 ZNF521Q96K83 1311 aa20.76■□□□□ 0.91
CCDC90B-201ENST00000260054 LMOD3Q0VAK6 560 aa20.76■□□□□ 0.91
CCDC90B-201ENST00000260054 MPRIPQ6WCQ1 1025 aa20.76■□□□□ 0.91
CCDC90B-201ENST00000260054 MCM10Q7L590 875 aa20.76■□□□□ 0.91
CCDC90B-201ENST00000260054 THUMPD2Q9BTF0 503 aaKnown RBP20.76■□□□□ 0.91
CCDC90B-201ENST00000260054 HTATSF1O43719 755 aaKnown RBP20.75■□□□□ 0.91
CCDC90B-201ENST00000260054 MARCH10Q8NA82 808 aaPredicted RBP20.75■□□□□ 0.91
CCDC90B-201ENST00000260054 IL17REQ8NFR9 667 aa20.75■□□□□ 0.91
CCDC90B-201ENST00000260054 LGR6Q9HBX8 967 aa20.75■□□□□ 0.91
CCDC90B-201ENST00000260054 KDM6AO15550 1401 aaPredicted RBP20.75■□□□□ 0.91
CCDC90B-201ENST00000260054 ZBED9Q6R2W3 1325 aa20.74■□□□□ 0.91
CCDC90B-201ENST00000260054 NKX1-1Q15270 411 aaPredicted RBP20.74■□□□□ 0.91
CCDC90B-201ENST00000260054 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
CCDC90B-201ENST00000260054 RGS12O14924 1447 aa20.73■□□□□ 0.91
CCDC90B-201ENST00000260054 RNMTO43148 476 aaKnown RBP20.73■□□□□ 0.91
CCDC90B-201ENST00000260054 PDE3BQ13370 1112 aa20.73■□□□□ 0.91
CCDC90B-201ENST00000260054 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
CCDC90B-201ENST00000260054 ADAMTS7Q9UKP4 1686 aa20.73■□□□□ 0.91
CCDC90B-201ENST00000260054 CEMIPQ8WUJ3 1361 aa20.72■□□□□ 0.91
CCDC90B-201ENST00000260054 HSP90AB1P08238 724 aaKnown RBP20.72■□□□□ 0.91
CCDC90B-201ENST00000260054 BRWD3Q6RI45 1802 aa20.7■□□□□ 0.9
CCDC90B-201ENST00000260054 SCN11AQ9UI33 1791 aa20.7■□□□□ 0.9
CCDC90B-201ENST00000260054 FAM182BQ5T319 152 aa20.69■□□□□ 0.9
CCDC90B-201ENST00000260054 VIRMAQ69YN4 1812 aaKnown RBP20.69■□□□□ 0.9
CCDC90B-201ENST00000260054 TOGARAM1Q9Y4F4 1720 aa20.68■□□□□ 0.9
CCDC90B-201ENST00000260054 WDR63Q8IWG1 891 aa20.68■□□□□ 0.9
CCDC90B-201ENST00000260054 KRT27Q7Z3Y8 459 aa20.67■□□□□ 0.9
CCDC90B-201ENST00000260054 SPINK5Q9NQ38 1064 aaPredicted RBP20.67■□□□□ 0.9
CCDC90B-201ENST00000260054 MRC1P22897 1456 aa20.66■□□□□ 0.9
CCDC90B-201ENST00000260054 CDCA7LQ96GN5 454 aa20.66■□□□□ 0.9
CCDC90B-201ENST00000260054 SLC52A2Q9HAB3 445 aa20.66■□□□□ 0.9
CCDC90B-201ENST00000260054 CALD1Q05682 793 aaKnown RBP20.65■□□□□ 0.9
CCDC90B-201ENST00000260054 GOLGA2Q08379 1002 aa20.65■□□□□ 0.9
CCDC90B-201ENST00000260054 ERVV-2B6SEH9 535 aa20.64■□□□□ 0.9
CCDC90B-201ENST00000260054 TEFQ10587 303 aa20.64■□□□□ 0.9
CCDC90B-201ENST00000260054 DOT1LQ8TEK3 1739 aa20.64■□□□□ 0.9
CCDC90B-201ENST00000260054 IL16Q14005 1332 aa20.64■□□□□ 0.89
CCDC90B-201ENST00000260054 BCL9O00512 1426 aa20.64■□□□□ 0.89
CCDC90B-201ENST00000260054 NFATC2IPQ8NCF5 419 aa20.64■□□□□ 0.89
CCDC90B-201ENST00000260054 ZNF853P0CG23 659 aa20.63■□□□□ 0.89
CCDC90B-201ENST00000260054 CABP4P57796 275 aa20.63■□□□□ 0.89
CCDC90B-201ENST00000260054 ACSBG1Q96GR2 724 aa20.63■□□□□ 0.89
CCDC90B-201ENST00000260054 TAF7Q15545 349 aaPredicted RBP20.62■□□□□ 0.89
CCDC90B-201ENST00000260054 CFAP44Q96MT7 982 aa20.62■□□□□ 0.89
CCDC90B-201ENST00000260054 IFT57Q9NWB7 429 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms