RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 MEX3CQ5U5Q3 659 aaKnown RBP14.78□□□□□ -0.04
CCNA1-201ENST00000255465 MYOM1P52179 1685 aa14.78□□□□□ -0.04
CCNA1-201ENST00000255465 NINLQ9Y2I6 1382 aa14.78□□□□□ -0.04
CCNA1-201ENST00000255465 SSH2Q76I76 1423 aa14.78□□□□□ -0.04
CCNA1-201ENST00000255465 UQCRHLA0A096LP55 91 aa14.78□□□□□ -0.04
CCNA1-201ENST00000255465 DDX11L8A8MPP1 907 aa14.78□□□□□ -0.04
CCNA1-201ENST00000255465 UQCRHP07919 91 aa14.78□□□□□ -0.04
CCNA1-201ENST00000255465 CABLES1Q8TDN4 633 aa14.78□□□□□ -0.04
CCNA1-201ENST00000255465 ADAMTS2O95450 1211 aa14.77□□□□□ -0.05
CCNA1-201ENST00000255465 SASS6Q6UVJ0 657 aa14.76□□□□□ -0.05
CCNA1-201ENST00000255465 ABTB2Q8N961 1025 aa14.76□□□□□ -0.05
CCNA1-201ENST00000255465 ZNF622Q969S3 477 aaKnown RBP eCLIP14.76□□□□□ -0.05
CCNA1-201ENST00000255465 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
CCNA1-201ENST00000255465 PHRF1Q9P1Y6 1649 aaKnown RBP14.76□□□□□ -0.05
CCNA1-201ENST00000255465 PIK3C2AO00443 1686 aa14.76□□□□□ -0.05
CCNA1-201ENST00000255465 HDGFL2Q7Z4V5 671 aaPredicted RBP14.76□□□□□ -0.05
CCNA1-201ENST00000255465 TERF2IPQ9NYB0 399 aa14.76□□□□□ -0.05
CCNA1-201ENST00000255465 KDM2BQ8NHM5 1336 aa14.76□□□□□ -0.05
CCNA1-201ENST00000255465 A0A1W2PP64 1363 aa14.75□□□□□ -0.05
CCNA1-201ENST00000255465 NUTM2GQ5VZR2 741 aa14.75□□□□□ -0.05
CCNA1-201ENST00000255465 PLCD3Q8N3E9 789 aa14.75□□□□□ -0.05
CCNA1-201ENST00000255465 TTC21BQ7Z4L5 1316 aa14.75□□□□□ -0.05
CCNA1-201ENST00000255465 CCDC7Q96M83 1385 aa14.75□□□□□ -0.05
CCNA1-201ENST00000255465 HAP1P54257 671 aaPredicted RBP14.74□□□□□ -0.05
CCNA1-201ENST00000255465 RCAN3Q9UKA8 241 aa14.74□□□□□ -0.05
CCNA1-201ENST00000255465 TRAK2O60296 914 aa14.74□□□□□ -0.05
CCNA1-201ENST00000255465 C8orf37Q96NL8 207 aa14.74□□□□□ -0.05
CCNA1-201ENST00000255465 ARID3AQ99856 593 aa14.74□□□□□ -0.05
CCNA1-201ENST00000255465 PRDM10Q9NQV6 1147 aa14.74□□□□□ -0.05
CCNA1-201ENST00000255465 RGS17Q9UGC6 210 aaPredicted RBP14.74□□□□□ -0.05
CCNA1-201ENST00000255465 TTC21AQ8NDW8 1320 aa14.73□□□□□ -0.05
CCNA1-201ENST00000255465 ANKRD36BQ8N2N9 1353 aa14.72□□□□□ -0.05
CCNA1-201ENST00000255465 SKOR2Q2VWA4 1001 aaPredicted RBP14.72□□□□□ -0.05
CCNA1-201ENST00000255465 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
CCNA1-201ENST00000255465 POLR3GLQ9BT43 218 aa14.72□□□□□ -0.05
CCNA1-201ENST00000255465 EDC4Q6P2E9 1401 aaKnown RBP14.72□□□□□ -0.05
CCNA1-201ENST00000255465 NGLY1Q96IV0 654 aa14.72□□□□□ -0.05
CCNA1-201ENST00000255465 IBTKQ9P2D0 1353 aaPredicted RBP14.71□□□□□ -0.05
CCNA1-201ENST00000255465 VGLL3A8MV65 326 aa14.71□□□□□ -0.05
CCNA1-201ENST00000255465 NLRP6P59044 892 aa14.71□□□□□ -0.05
CCNA1-201ENST00000255465 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.71□□□□□ -0.05
CCNA1-201ENST00000255465 R3HCC1Q9Y3T6 440 aaKnown RBP14.71□□□□□ -0.05
CCNA1-201ENST00000255465 USP19O94966 1318 aa14.7□□□□□ -0.06
CCNA1-201ENST00000255465 AFF2P51816 1311 aa14.7□□□□□ -0.06
CCNA1-201ENST00000255465 INSRP06213 1382 aa14.7□□□□□ -0.06
CCNA1-201ENST00000255465 PLCH1Q4KWH8 1693 aa14.7□□□□□ -0.06
CCNA1-201ENST00000255465 USP54Q70EL1 1684 aa14.7□□□□□ -0.06
CCNA1-201ENST00000255465 GEMIN8Q9NWZ8 242 aaKnown RBP14.69□□□□□ -0.06
CCNA1-201ENST00000255465 CCDC66A2RUB6 948 aa14.69□□□□□ -0.06
CCNA1-201ENST00000255465 PTMAP06454 111 aaKnown RBP14.69□□□□□ -0.06
CCNA1-201ENST00000255465 NOL7Q9UMY1 257 aaKnown RBP14.69□□□□□ -0.06
CCNA1-201ENST00000255465 SLIT3O75094 1523 aa14.69□□□□□ -0.06
CCNA1-201ENST00000255465 NME9Q86XW9 330 aa14.68□□□□□ -0.06
CCNA1-201ENST00000255465 FNBP4Q8N3X1 1017 aaPredicted RBP14.68□□□□□ -0.06
CCNA1-201ENST00000255465 NWD2Q9ULI1 1742 aa14.68□□□□□ -0.06
CCNA1-201ENST00000255465 COL14A1Q05707 1796 aaKnown RBP14.68□□□□□ -0.06
CCNA1-201ENST00000255465 KIF20BQ96Q89 1820 aa14.67□□□□□ -0.06
CCNA1-201ENST00000255465 FAM193AP78312 1265 aa14.67□□□□□ -0.06
CCNA1-201ENST00000255465 ZNF772Q68DY9 489 aaPredicted RBP14.67□□□□□ -0.06
CCNA1-201ENST00000255465 CHMP5Q9NZZ3 219 aa14.67□□□□□ -0.06
CCNA1-201ENST00000255465 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
CCNA1-201ENST00000255465 FBXO3Q9UK99 471 aa14.67□□□□□ -0.06
CCNA1-201ENST00000255465 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.67□□□□□ -0.06
CCNA1-201ENST00000255465 KIF7Q2M1P5 1343 aa14.67□□□□□ -0.06
CCNA1-201ENST00000255465 FAM83GA6ND36 823 aa14.67□□□□□ -0.06
CCNA1-201ENST00000255465 GCP02774 474 aa14.67□□□□□ -0.06
CCNA1-201ENST00000255465 POTEAQ6S8J7 498 aa14.67□□□□□ -0.06
CCNA1-201ENST00000255465 USP31Q70CQ4 1352 aa14.67□□□□□ -0.06
CCNA1-201ENST00000255465 SLIT2O94813 1529 aa14.66□□□□□ -0.06
CCNA1-201ENST00000255465 RBM25P49756 843 aaKnown RBP14.66□□□□□ -0.06
CCNA1-201ENST00000255465 ZC3H6P61129 1189 aaKnown RBP14.66□□□□□ -0.06
CCNA1-201ENST00000255465 CARD14Q9BXL6 1004 aa14.66□□□□□ -0.06
CCNA1-201ENST00000255465 USP21Q9UK80 565 aa14.66□□□□□ -0.06
CCNA1-201ENST00000255465 GTF2F1P35269 517 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCNA1-201ENST00000255465 GABPB1Q06547 395 aaPredicted RBP14.65□□□□□ -0.06
CCNA1-201ENST00000255465 KIAA0232Q92628 1395 aa14.65□□□□□ -0.06
CCNA1-201ENST00000255465 BCL9LQ86UU0 1499 aa14.65□□□□□ -0.06
CCNA1-201ENST00000255465 IRX5P78411 483 aaPredicted RBP14.65□□□□□ -0.06
CCNA1-201ENST00000255465 HMGN5P82970 282 aaKnown RBP14.65□□□□□ -0.06
CCNA1-201ENST00000255465 PRIMPOLQ96LW4 560 aa14.65□□□□□ -0.06
CCNA1-201ENST00000255465 PRDM11Q9NQV5 511 aa14.65□□□□□ -0.06
CCNA1-201ENST00000255465 NRAPQ86VF7 1730 aa14.64□□□□□ -0.07
CCNA1-201ENST00000255465 CPDO75976 1380 aa14.64□□□□□ -0.07
CCNA1-201ENST00000255465 PSEN1P49768 467 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 MYRIPQ8NFW9 859 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 EFCC1Q9HA90 598 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 HDAC5Q9UQL6 1122 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 OVOS2A0A0J9YW53 1432 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 OVOS2Q6IE36 1432 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 NSD3Q9BZ95 1437 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 LTN1O94822 1766 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 RGPD5Q99666 1765 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 CHRNA2Q15822 529 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 CREBRFQ8IUR6 639 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 KCNH5Q8NCM2 988 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 QTRT2Q9H974 415 aaKnown RBP14.63□□□□□ -0.07
CCNA1-201ENST00000255465 PANK3Q9H999 370 aa14.63□□□□□ -0.07
CCNA1-201ENST00000255465 NFAT5O94916 1531 aa14.62□□□□□ -0.07
CCNA1-201ENST00000255465 FYB1O15117 783 aa14.62□□□□□ -0.07
CCNA1-201ENST00000255465 SOX12O15370 315 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms