RNA–Protein interactions for RNA: ENST00000255152.2

ZSWIM3-201, Transcript of zinc finger SWIM-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZSWIM3, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3-201ENST00000255152 NUCB2P80303 420 aa15.93■□□□□ 0.14
ZSWIM3-201ENST00000255152 NOLC1Q14978 699 aaKnown RBP eCLIP15.93■□□□□ 0.14
ZSWIM3-201ENST00000255152 TNNQ9UQP3 1299 aa15.93■□□□□ 0.14
ZSWIM3-201ENST00000255152 ZBTB7CA1YPR0 619 aa15.92■□□□□ 0.14
ZSWIM3-201ENST00000255152 MED14O60244 1454 aa15.92■□□□□ 0.14
ZSWIM3-201ENST00000255152 NPHP4O75161 1426 aaPredicted RBP15.92■□□□□ 0.14
ZSWIM3-201ENST00000255152 FAM177BA6PVY3 158 aa15.92■□□□□ 0.14
ZSWIM3-201ENST00000255152 U2AF2P26368 475 aaKnown RBP eCLIP15.92■□□□□ 0.14
ZSWIM3-201ENST00000255152 GABPB1Q06547 395 aaPredicted RBP15.92■□□□□ 0.14
ZSWIM3-201ENST00000255152 AMER1Q5JTC6 1135 aaPredicted RBP15.92■□□□□ 0.14
ZSWIM3-201ENST00000255152 DNAJC2Q99543 621 aaKnown RBP15.92■□□□□ 0.14
ZSWIM3-201ENST00000255152 KCNJ4P48050 445 aa15.91■□□□□ 0.14
ZSWIM3-201ENST00000255152 TULP4Q9NRJ4 1543 aa15.91■□□□□ 0.14
ZSWIM3-201ENST00000255152 MVPQ14764 893 aaKnown RBP15.91■□□□□ 0.14
ZSWIM3-201ENST00000255152 OGFRQ9NZT2 677 aa15.91■□□□□ 0.14
ZSWIM3-201ENST00000255152 SBNO2Q9Y2G9 1366 aa15.9■□□□□ 0.14
ZSWIM3-201ENST00000255152 WWC1Q8IX03 1113 aa15.9■□□□□ 0.14
ZSWIM3-201ENST00000255152 RBM27Q9P2N5 1060 aaKnown RBP15.9■□□□□ 0.14
ZSWIM3-201ENST00000255152 KIF16BQ96L93 1317 aa15.9■□□□□ 0.14
ZSWIM3-201ENST00000255152 HDAC1Q13547 482 aaPredicted RBP15.9■□□□□ 0.14
ZSWIM3-201ENST00000255152 ANKRD7Q92527 254 aa15.9■□□□□ 0.14
ZSWIM3-201ENST00000255152 GPT2Q8TD30 523 aa15.89■□□□□ 0.13
ZSWIM3-201ENST00000255152 SYCE3A1L190 88 aa15.89■□□□□ 0.13
ZSWIM3-201ENST00000255152 CCDC66A2RUB6 948 aa15.89■□□□□ 0.13
ZSWIM3-201ENST00000255152 PRPF40AO75400 957 aaKnown RBP15.88■□□□□ 0.13
ZSWIM3-201ENST00000255152 FKBP5Q13451 457 aaPredicted RBP15.88■□□□□ 0.13
ZSWIM3-201ENST00000255152 CYP2E1P05181 493 aaPredicted RBP15.88■□□□□ 0.13
ZSWIM3-201ENST00000255152 WASLO00401 505 aaPredicted RBP15.87■□□□□ 0.13
ZSWIM3-201ENST00000255152 RNF214Q8ND24 703 aa15.87■□□□□ 0.13
ZSWIM3-201ENST00000255152 CARD14Q9BXL6 1004 aa15.87■□□□□ 0.13
ZSWIM3-201ENST00000255152 CABP1Q9NZU7 370 aa15.87■□□□□ 0.13
ZSWIM3-201ENST00000255152 TMEM63CQ9P1W3 806 aa15.87■□□□□ 0.13
ZSWIM3-201ENST00000255152 C14orf37Q86TY3 774 aa15.87■□□□□ 0.13
ZSWIM3-201ENST00000255152 SPTLC3Q9NUV7 552 aa15.87■□□□□ 0.13
ZSWIM3-201ENST00000255152 LMTK3Q96Q04 1460 aa15.87■□□□□ 0.13
ZSWIM3-201ENST00000255152 DIAPH3Q9NSV4 1193 aa15.87■□□□□ 0.13
ZSWIM3-201ENST00000255152 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
ZSWIM3-201ENST00000255152 BCL2L13Q9BXK5 485 aa15.86■□□□□ 0.13
ZSWIM3-201ENST00000255152 TIGD1Q96MW7 591 aa15.85■□□□□ 0.13
ZSWIM3-201ENST00000255152 DLC1Q96QB1 1528 aa15.85■□□□□ 0.13
ZSWIM3-201ENST00000255152 IRX3P78415 501 aaPredicted RBP15.85■□□□□ 0.13
ZSWIM3-201ENST00000255152 TECPR2O15040 1411 aa15.84■□□□□ 0.13
ZSWIM3-201ENST00000255152 SLFN14P0C7P3 912 aa15.84■□□□□ 0.13
ZSWIM3-201ENST00000255152 CHAF1AQ13111 956 aaPredicted RBP15.84■□□□□ 0.13
ZSWIM3-201ENST00000255152 TEX2Q8IWB9 1127 aa15.84■□□□□ 0.13
ZSWIM3-201ENST00000255152 NUDT16Q96DE0 195 aaKnown RBP15.84■□□□□ 0.13
ZSWIM3-201ENST00000255152 FAM135BQ49AJ0 1406 aa15.84■□□□□ 0.13
ZSWIM3-201ENST00000255152 AK9Q5TCS8 1911 aa15.83■□□□□ 0.13
ZSWIM3-201ENST00000255152 SIRT1Q96EB6 747 aa15.83■□□□□ 0.13
ZSWIM3-201ENST00000255152 DZIP1LQ8IYY4 767 aaKnown RBP15.83■□□□□ 0.12
ZSWIM3-201ENST00000255152 ZFP91Q96JP5 570 aaPredicted RBP15.83■□□□□ 0.12
ZSWIM3-201ENST00000255152 TSPY26PQ9H489 355 aa15.83■□□□□ 0.12
ZSWIM3-201ENST00000255152 MYOM1P52179 1685 aa15.83■□□□□ 0.12
ZSWIM3-201ENST00000255152 CTIFO43310 598 aaKnown RBP15.82■□□□□ 0.12
ZSWIM3-201ENST00000255152 BMP2KLQ5H9B9 411 aa15.82■□□□□ 0.12
ZSWIM3-201ENST00000255152 PROSER2Q86WR7 435 aaPredicted RBP15.82■□□□□ 0.12
ZSWIM3-201ENST00000255152 NPC1L1Q9UHC9 1359 aa15.82■□□□□ 0.12
ZSWIM3-201ENST00000255152 CPS1P31327 1500 aa15.82■□□□□ 0.12
ZSWIM3-201ENST00000255152 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
ZSWIM3-201ENST00000255152 HOMEZQ8IX15 550 aa15.82■□□□□ 0.12
ZSWIM3-201ENST00000255152 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.82■□□□□ 0.12
ZSWIM3-201ENST00000255152 PRR36Q9H6K5 1346 aa15.81■□□□□ 0.12
ZSWIM3-201ENST00000255152 RIOK3O14730 519 aaKnown RBP15.81■□□□□ 0.12
ZSWIM3-201ENST00000255152 MBD3O95983 291 aa15.81■□□□□ 0.12
ZSWIM3-201ENST00000255152 MAPK8IP2Q13387 824 aaPredicted RBP15.81■□□□□ 0.12
ZSWIM3-201ENST00000255152 CWC22Q9HCG8 908 aaKnown RBP15.81■□□□□ 0.12
ZSWIM3-201ENST00000255152 C17orf53Q8N3J3 647 aaPredicted RBP15.81■□□□□ 0.12
ZSWIM3-201ENST00000255152 DIP2AQ14689 1571 aa15.81■□□□□ 0.12
ZSWIM3-201ENST00000255152 CHRM1P11229 460 aaPredicted RBP15.8■□□□□ 0.12
ZSWIM3-201ENST00000255152 NUCB1Q02818 461 aa15.8■□□□□ 0.12
ZSWIM3-201ENST00000255152 TTC12Q9H892 705 aaPredicted RBP15.8■□□□□ 0.12
ZSWIM3-201ENST00000255152 PKP1Q13835 747 aa15.8■□□□□ 0.12
ZSWIM3-201ENST00000255152 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.8■□□□□ 0.12
ZSWIM3-201ENST00000255152 NSD3Q9BZ95 1437 aa15.79■□□□□ 0.12
ZSWIM3-201ENST00000255152 ATAD2Q6PL18 1390 aa15.79■□□□□ 0.12
ZSWIM3-201ENST00000255152 CHMP4AQ9BY43 222 aa15.79■□□□□ 0.12
ZSWIM3-201ENST00000255152 KNDC1Q76NI1 1749 aa15.79■□□□□ 0.12
ZSWIM3-201ENST00000255152 PIK3R4Q99570 1358 aa15.79■□□□□ 0.12
ZSWIM3-201ENST00000255152 TULP2O00295 520 aa15.79■□□□□ 0.12
ZSWIM3-201ENST00000255152 UVSSAQ2YD98 709 aa15.79■□□□□ 0.12
ZSWIM3-201ENST00000255152 MPNDQ8N594 471 aa15.79■□□□□ 0.12
ZSWIM3-201ENST00000255152 CTNNA3Q9UI47 895 aa15.79■□□□□ 0.12
ZSWIM3-201ENST00000255152 NSFL1CQ9UNZ2 370 aaKnown RBP15.79■□□□□ 0.12
ZSWIM3-201ENST00000255152 A0A1W2PP64 1363 aa15.78■□□□□ 0.12
ZSWIM3-201ENST00000255152 RABEP1Q15276 862 aa15.78■□□□□ 0.12
ZSWIM3-201ENST00000255152 TERF2Q15554 542 aa15.78■□□□□ 0.12
ZSWIM3-201ENST00000255152 CALCOCO1Q9P1Z2 691 aa15.78■□□□□ 0.12
ZSWIM3-201ENST00000255152 DDX19BQ9UMR2 479 aa15.78■□□□□ 0.12
ZSWIM3-201ENST00000255152 WDR63Q8IWG1 891 aa15.78■□□□□ 0.12
ZSWIM3-201ENST00000255152 DDX41Q9UJV9 622 aaKnown RBP15.78■□□□□ 0.12
ZSWIM3-201ENST00000255152 CCDC61Q9Y6R9 512 aa15.78■□□□□ 0.12
ZSWIM3-201ENST00000255152 PTCH1Q13635 1447 aa15.77■□□□□ 0.12
ZSWIM3-201ENST00000255152 RGS22Q8NE09 1264 aa15.77■□□□□ 0.12
ZSWIM3-201ENST00000255152 LNPKQ9C0E8 428 aa15.77■□□□□ 0.12
ZSWIM3-201ENST00000255152 TSPYL1Q9H0U9 437 aa15.77■□□□□ 0.12
ZSWIM3-201ENST00000255152 CHD2O14647 1828 aaKnown RBP15.77■□□□□ 0.12
ZSWIM3-201ENST00000255152 PPIP5K1Q6PFW1 1433 aa15.77■□□□□ 0.12
ZSWIM3-201ENST00000255152 TBC1D9Q6ZT07 1266 aa15.77■□□□□ 0.11
ZSWIM3-201ENST00000255152 FAM184AQ8NB25 1140 aa15.77■□□□□ 0.11
ZSWIM3-201ENST00000255152 TERF2IPQ9NYB0 399 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms