RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 SMG6Q86US8 1419 aaKnown RBP17.98■□□□□ 0.47
APOBEC3A-201ENST00000249116 YY1P25490 414 aa17.98■□□□□ 0.47
APOBEC3A-201ENST00000249116 PTGER2P43116 358 aa17.98■□□□□ 0.47
APOBEC3A-201ENST00000249116 SYTL4Q96C24 671 aaPredicted RBP17.98■□□□□ 0.47
APOBEC3A-201ENST00000249116 NPM3O75607 178 aaKnown RBP17.97■□□□□ 0.47
APOBEC3A-201ENST00000249116 SLC27A3Q5K4L6 730 aa17.97■□□□□ 0.47
APOBEC3A-201ENST00000249116 PAPPAQ13219 1627 aa17.96■□□□□ 0.47
APOBEC3A-201ENST00000249116 CGNL1Q0VF96 1302 aa17.95■□□□□ 0.46
APOBEC3A-201ENST00000249116 CLSPNQ9HAW4 1339 aa17.95■□□□□ 0.46
APOBEC3A-201ENST00000249116 PRIM1P49642 420 aaKnown RBP17.95■□□□□ 0.46
APOBEC3A-201ENST00000249116 NBPF6Q5VWK0 638 aa17.95■□□□□ 0.46
APOBEC3A-201ENST00000249116 RAPGEF4Q8WZA2 1011 aa17.95■□□□□ 0.46
APOBEC3A-201ENST00000249116 NBPF4Q96M43 638 aa17.95■□□□□ 0.46
APOBEC3A-201ENST00000249116 LRRC4BQ9NT99 713 aa17.95■□□□□ 0.46
APOBEC3A-201ENST00000249116 ZNF827Q17R98 1081 aa17.94■□□□□ 0.46
APOBEC3A-201ENST00000249116 MYOM1P52179 1685 aa17.94■□□□□ 0.46
APOBEC3A-201ENST00000249116 MEGF6O75095 1541 aa17.94■□□□□ 0.46
APOBEC3A-201ENST00000249116 KIF24Q5T7B8 1368 aa17.94■□□□□ 0.46
APOBEC3A-201ENST00000249116 TATP17735 454 aaPredicted RBP17.93■□□□□ 0.46
APOBEC3A-201ENST00000249116 INSRP06213 1382 aa17.93■□□□□ 0.46
APOBEC3A-201ENST00000249116 FLT4P35916 1363 aa17.93■□□□□ 0.46
APOBEC3A-201ENST00000249116 USHBP1Q8N6Y0 703 aa17.92■□□□□ 0.46
APOBEC3A-201ENST00000249116 FHDC1Q9C0D6 1143 aaPredicted RBP17.92■□□□□ 0.46
APOBEC3A-201ENST00000249116 AKT1S1Q96B36 256 aa17.91■□□□□ 0.46
APOBEC3A-201ENST00000249116 SGIP1Q9BQI5 828 aa17.91■□□□□ 0.46
APOBEC3A-201ENST00000249116 RGPD2P0DJD1 1756 aa17.91■□□□□ 0.46
APOBEC3A-201ENST00000249116 KIF20BQ96Q89 1820 aa17.91■□□□□ 0.46
APOBEC3A-201ENST00000249116 HSP90AB2PQ58FF8 381 aa17.9■□□□□ 0.46
APOBEC3A-201ENST00000249116 CCER1Q8TC90 406 aaPredicted RBP17.9■□□□□ 0.46
APOBEC3A-201ENST00000249116 SLC16A10Q8TF71 515 aa17.9■□□□□ 0.46
APOBEC3A-201ENST00000249116 ARXQ96QS3 562 aa17.9■□□□□ 0.46
APOBEC3A-201ENST00000249116 SYT17Q9BSW7 474 aa17.9■□□□□ 0.46
APOBEC3A-201ENST00000249116 KAT6BQ8WYB5 2073 aa17.9■□□□□ 0.46
APOBEC3A-201ENST00000249116 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
APOBEC3A-201ENST00000249116 DOT1LQ8TEK3 1739 aa17.9■□□□□ 0.46
APOBEC3A-201ENST00000249116 CARD14Q9BXL6 1004 aa17.89■□□□□ 0.46
APOBEC3A-201ENST00000249116 NSD2O96028 1365 aa17.89■□□□□ 0.45
APOBEC3A-201ENST00000249116 TFCP2L1Q9NZI6 479 aa17.89■□□□□ 0.45
APOBEC3A-201ENST00000249116 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
APOBEC3A-201ENST00000249116 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
APOBEC3A-201ENST00000249116 CCNL1Q9UK58 526 aaPredicted RBP17.88■□□□□ 0.45
APOBEC3A-201ENST00000249116 SHANK3Q9BYB0 1731 aa17.88■□□□□ 0.45
APOBEC3A-201ENST00000249116 KCNQ4P56696 695 aa17.87■□□□□ 0.45
APOBEC3A-201ENST00000249116 EMILIN1Q9Y6C2 1016 aa17.87■□□□□ 0.45
APOBEC3A-201ENST00000249116 HMGB2P26583 209 aaKnown RBP17.86■□□□□ 0.45
APOBEC3A-201ENST00000249116 POLD1P28340 1107 aa17.86■□□□□ 0.45
APOBEC3A-201ENST00000249116 PNPLA7Q6ZV29 1317 aa17.86■□□□□ 0.45
APOBEC3A-201ENST00000249116 PPM1GO15355 546 aaPredicted RBP17.85■□□□□ 0.45
APOBEC3A-201ENST00000249116 MAP3K5Q99683 1374 aa17.85■□□□□ 0.45
APOBEC3A-201ENST00000249116 LY75O60449 1722 aa17.84■□□□□ 0.45
APOBEC3A-201ENST00000249116 QSER1Q2KHR3 1735 aa17.84■□□□□ 0.45
APOBEC3A-201ENST00000249116 POLR3GLQ9BT43 218 aa17.83■□□□□ 0.45
APOBEC3A-201ENST00000249116 KLHL34Q8N239 644 aa17.81■□□□□ 0.44
APOBEC3A-201ENST00000249116 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
APOBEC3A-201ENST00000249116 CYP27B1O15528 508 aa17.81■□□□□ 0.44
APOBEC3A-201ENST00000249116 MPRIPQ6WCQ1 1025 aa17.81■□□□□ 0.44
APOBEC3A-201ENST00000249116 SPG7Q9UQ90 795 aa17.81■□□□□ 0.44
APOBEC3A-201ENST00000249116 EIF4G2P78344 907 aaKnown RBP eCLIP17.8■□□□□ 0.44
APOBEC3A-201ENST00000249116 NCAPD2Q15021 1401 aa17.79■□□□□ 0.44
APOBEC3A-201ENST00000249116 PALLDQ8WX93 1383 aa17.79■□□□□ 0.44
APOBEC3A-201ENST00000249116 C1QBPQ07021 282 aaKnown RBP17.79■□□□□ 0.44
APOBEC3A-201ENST00000249116 SMARCC1Q92922 1105 aaPredicted RBP17.79■□□□□ 0.44
APOBEC3A-201ENST00000249116 ANKRD26Q9UPS8 1709 aa17.77■□□□□ 0.44
APOBEC3A-201ENST00000249116 GPR162Q16538 588 aa17.77■□□□□ 0.44
APOBEC3A-201ENST00000249116 COL23A1Q86Y22 540 aaPredicted RBP17.77■□□□□ 0.44
APOBEC3A-201ENST00000249116 FLAD1Q8NFF5 587 aa17.77■□□□□ 0.44
APOBEC3A-201ENST00000249116 EYA1Q99502 592 aa17.77■□□□□ 0.44
APOBEC3A-201ENST00000249116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.77■□□□□ 0.44
APOBEC3A-201ENST00000249116 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
APOBEC3A-201ENST00000249116 TUBGCP6Q96RT7 1819 aa17.77■□□□□ 0.43
APOBEC3A-201ENST00000249116 PKD1L3Q7Z443 1732 aa17.76■□□□□ 0.43
APOBEC3A-201ENST00000249116 NKX1-1Q15270 411 aaPredicted RBP17.76■□□□□ 0.43
APOBEC3A-201ENST00000249116 COL24A1Q17RW2 1714 aa17.76■□□□□ 0.43
APOBEC3A-201ENST00000249116 HSPA5P11021 654 aaKnown RBP17.75■□□□□ 0.43
APOBEC3A-201ENST00000249116 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
APOBEC3A-201ENST00000249116 C5P01031 1676 aa17.74■□□□□ 0.43
APOBEC3A-201ENST00000249116 IFNL2Q8IZJ0 200 aa17.73■□□□□ 0.43
APOBEC3A-201ENST00000249116 PIGBQ92521 554 aa17.73■□□□□ 0.43
APOBEC3A-201ENST00000249116 MAP2P11137 1827 aaKnown RBP17.73■□□□□ 0.43
APOBEC3A-201ENST00000249116 EIF4A2Q14240 407 aaKnown RBP17.72■□□□□ 0.43
APOBEC3A-201ENST00000249116 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
APOBEC3A-201ENST00000249116 ZNF784Q8NCA9 323 aaPredicted RBP17.72■□□□□ 0.43
APOBEC3A-201ENST00000249116 AK7Q96M32 723 aa17.72■□□□□ 0.43
APOBEC3A-201ENST00000249116 PANK3Q9H999 370 aa17.72■□□□□ 0.43
APOBEC3A-201ENST00000249116 TMOD3Q9NYL9 352 aa17.72■□□□□ 0.43
APOBEC3A-201ENST00000249116 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
APOBEC3A-201ENST00000249116 MSL1Q68DK7 614 aa17.72■□□□□ 0.43
APOBEC3A-201ENST00000249116 PLEKHG2Q9H7P9 1386 aa17.71■□□□□ 0.43
APOBEC3A-201ENST00000249116 PHKG2P15735 406 aa17.71■□□□□ 0.43
APOBEC3A-201ENST00000249116 NLGN2Q8NFZ4 835 aa17.7■□□□□ 0.42
APOBEC3A-201ENST00000249116 ITGB4P16144 1822 aa17.7■□□□□ 0.42
APOBEC3A-201ENST00000249116 C4BP0C0L5 1744 aa17.68■□□□□ 0.42
APOBEC3A-201ENST00000249116 LOC102724428A0A0B4J2F2 783 aa17.68■□□□□ 0.42
APOBEC3A-201ENST00000249116 SIK1P57059 783 aa17.68■□□□□ 0.42
APOBEC3A-201ENST00000249116 TAF1LQ8IZX4 1826 aa17.68■□□□□ 0.42
APOBEC3A-201ENST00000249116 IGSF1Q8N6C5 1336 aa17.68■□□□□ 0.42
APOBEC3A-201ENST00000249116 CHD4Q14839 1912 aa17.67■□□□□ 0.42
APOBEC3A-201ENST00000249116 GRIN3BO60391 1043 aa17.66■□□□□ 0.42
APOBEC3A-201ENST00000249116 PHF14O94880 888 aa17.66■□□□□ 0.42
APOBEC3A-201ENST00000249116 HSP90AB1P08238 724 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms