RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 RGPD5Q99666 1765 aa17.26■□□□□ 0.35
NUP85-201ENST00000245544 TNS3Q68CZ2 1445 aa17.26■□□□□ 0.35
NUP85-201ENST00000245544 SPATA31A3Q5VYP0 1347 aa17.26■□□□□ 0.35
NUP85-201ENST00000245544 CHL1O00533 1208 aa17.26■□□□□ 0.35
NUP85-201ENST00000245544 KRT24Q2M2I5 525 aa17.26■□□□□ 0.35
NUP85-201ENST00000245544 ZKSCAN2Q63HK3 967 aa17.26■□□□□ 0.35
NUP85-201ENST00000245544 ANKRD24Q8TF21 1146 aa17.26■□□□□ 0.35
NUP85-201ENST00000245544 TCERG1O14776 1098 aaKnown RBP17.25■□□□□ 0.35
NUP85-201ENST00000245544 TRIM27P14373 513 aa17.24■□□□□ 0.35
NUP85-201ENST00000245544 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
NUP85-201ENST00000245544 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
NUP85-201ENST00000245544 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
NUP85-201ENST00000245544 KDM2BQ8NHM5 1336 aa17.23■□□□□ 0.35
NUP85-201ENST00000245544 ALDH1L2Q3SY69 923 aa17.23■□□□□ 0.35
NUP85-201ENST00000245544 GNAT3A8MTJ3 354 aa17.22■□□□□ 0.35
NUP85-201ENST00000245544 ATF7IPQ6VMQ6 1270 aa17.21■□□□□ 0.35
NUP85-201ENST00000245544 DZIP1LQ8IYY4 767 aaKnown RBP17.21■□□□□ 0.35
NUP85-201ENST00000245544 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
NUP85-201ENST00000245544 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
NUP85-201ENST00000245544 FTSJ3Q8IY81 847 aaKnown RBP17.21■□□□□ 0.35
NUP85-201ENST00000245544 CRYBG1Q9Y4K1 1723 aa17.21■□□□□ 0.35
NUP85-201ENST00000245544 MAP3K5Q99683 1374 aa17.2■□□□□ 0.34
NUP85-201ENST00000245544 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
NUP85-201ENST00000245544 ZNF428Q96B54 188 aa17.2■□□□□ 0.34
NUP85-201ENST00000245544 ERBB3P21860 1342 aa17.19■□□□□ 0.34
NUP85-201ENST00000245544 COL18A1P39060 1754 aa17.19■□□□□ 0.34
NUP85-201ENST00000245544 HTATSF1O43719 755 aaKnown RBP17.19■□□□□ 0.34
NUP85-201ENST00000245544 MVPQ14764 893 aaKnown RBP17.19■□□□□ 0.34
NUP85-201ENST00000245544 NCAPD2Q15021 1401 aa17.19■□□□□ 0.34
NUP85-201ENST00000245544 SOS2Q07890 1332 aaPredicted RBP17.19■□□□□ 0.34
NUP85-201ENST00000245544 KIF16BQ96L93 1317 aa17.19■□□□□ 0.34
NUP85-201ENST00000245544 IGHDP01880 384 aa17.18■□□□□ 0.34
NUP85-201ENST00000245544 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
NUP85-201ENST00000245544 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
NUP85-201ENST00000245544 BRPF1P55201 1214 aaPredicted RBP17.18■□□□□ 0.34
NUP85-201ENST00000245544 TMEM57Q8N5G2 664 aa17.17■□□□□ 0.34
NUP85-201ENST00000245544 PCDHB15Q9Y5E8 787 aa17.17■□□□□ 0.34
NUP85-201ENST00000245544 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
NUP85-201ENST00000245544 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
NUP85-201ENST00000245544 CENPQQ7L2Z9 268 aaPredicted RBP17.17■□□□□ 0.34
NUP85-201ENST00000245544 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
NUP85-201ENST00000245544 LGR6Q9HBX8 967 aa17.16■□□□□ 0.34
NUP85-201ENST00000245544 IPO8O15397 1037 aaKnown RBP17.15■□□□□ 0.34
NUP85-201ENST00000245544 ITPRIPQ8IWB1 547 aa17.15■□□□□ 0.34
NUP85-201ENST00000245544 MS4A1P11836 297 aa17.14■□□□□ 0.33
NUP85-201ENST00000245544 ZNF530Q6P9A1 599 aaPredicted RBP17.14■□□□□ 0.33
NUP85-201ENST00000245544 NLRP2Q9NX02 1062 aa17.14■□□□□ 0.33
NUP85-201ENST00000245544 LMO7Q8WWI1 1683 aa17.14■□□□□ 0.33
NUP85-201ENST00000245544 PLEKHO1Q53GL0 409 aaPredicted RBP17.13■□□□□ 0.33
NUP85-201ENST00000245544 CPDO75976 1380 aa17.12■□□□□ 0.33
NUP85-201ENST00000245544 CEMIPQ8WUJ3 1361 aa17.12■□□□□ 0.33
NUP85-201ENST00000245544 TAF7Q15545 349 aaPredicted RBP17.12■□□□□ 0.33
NUP85-201ENST00000245544 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
NUP85-201ENST00000245544 NHSL1Q5SYE7 1610 aa17.11■□□□□ 0.33
NUP85-201ENST00000245544 CSB-PGBD3P0DP91 1061 aa17.11■□□□□ 0.33
NUP85-201ENST00000245544 AMOTQ4VCS5 1084 aa17.11■□□□□ 0.33
NUP85-201ENST00000245544 AKAP4Q5JQC9 854 aa17.11■□□□□ 0.33
NUP85-201ENST00000245544 ARHGAP45Q92619 1136 aa17.11■□□□□ 0.33
NUP85-201ENST00000245544 FAM208AQ9UK61 1670 aaKnown RBP17.11■□□□□ 0.33
NUP85-201ENST00000245544 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
NUP85-201ENST00000245544 AAMPQ13685 434 aa17.09■□□□□ 0.33
NUP85-201ENST00000245544 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.33
NUP85-201ENST00000245544 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.33
NUP85-201ENST00000245544 VIRMAQ69YN4 1812 aaKnown RBP17.08■□□□□ 0.33
NUP85-201ENST00000245544 MEGF6O75095 1541 aa17.08■□□□□ 0.32
NUP85-201ENST00000245544 ABCA3Q99758 1704 aa17.08■□□□□ 0.32
NUP85-201ENST00000245544 ABCC4O15439 1325 aa17.08■□□□□ 0.32
NUP85-201ENST00000245544 C1orf141Q5JVX7 400 aa17.08■□□□□ 0.32
NUP85-201ENST00000245544 LTBP4Q8N2S1 1624 aa17.07■□□□□ 0.32
NUP85-201ENST00000245544 ABCC6O95255 1503 aa17.07■□□□□ 0.32
NUP85-201ENST00000245544 RNMTO43148 476 aaKnown RBP17.07■□□□□ 0.32
NUP85-201ENST00000245544 KCNQ3O43525 872 aa17.07■□□□□ 0.32
NUP85-201ENST00000245544 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
NUP85-201ENST00000245544 RAPGEF4Q8WZA2 1011 aa17.07■□□□□ 0.32
NUP85-201ENST00000245544 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
NUP85-201ENST00000245544 G2E3Q7L622 706 aa17.06■□□□□ 0.32
NUP85-201ENST00000245544 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
NUP85-201ENST00000245544 RGS12O14924 1447 aa17.06■□□□□ 0.32
NUP85-201ENST00000245544 BABAM1Q9NWV8 329 aa17.06■□□□□ 0.32
NUP85-201ENST00000245544 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
NUP85-201ENST00000245544 TATP17735 454 aaPredicted RBP17.05■□□□□ 0.32
NUP85-201ENST00000245544 TEFQ10587 303 aa17.05■□□□□ 0.32
NUP85-201ENST00000245544 API5Q9BZZ5 524 aaKnown RBP17.05■□□□□ 0.32
NUP85-201ENST00000245544 ROBO1Q9Y6N7 1651 aa17.04■□□□□ 0.32
NUP85-201ENST00000245544 RGS3P49796 1198 aa17.03■□□□□ 0.32
NUP85-201ENST00000245544 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
NUP85-201ENST00000245544 KDM3BQ7LBC6 1761 aa17.03■□□□□ 0.32
NUP85-201ENST00000245544 BTBD11A6QL63 1104 aa17.03■□□□□ 0.32
NUP85-201ENST00000245544 RWDD1Q9H446 243 aaPredicted RBP17.03■□□□□ 0.32
NUP85-201ENST00000245544 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
NUP85-201ENST00000245544 COL5A2P05997 1499 aaPredicted RBP17.02■□□□□ 0.32
NUP85-201ENST00000245544 WDR17Q8IZU2 1322 aa17.01■□□□□ 0.31
NUP85-201ENST00000245544 PHKG2P15735 406 aa17.01■□□□□ 0.31
NUP85-201ENST00000245544 CYP27B1O15528 508 aa17■□□□□ 0.31
NUP85-201ENST00000245544 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
NUP85-201ENST00000245544 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
NUP85-201ENST00000245544 PTPRCP08575 1304 aa17■□□□□ 0.31
NUP85-201ENST00000245544 KDM6AO15550 1401 aaPredicted RBP17■□□□□ 0.31
NUP85-201ENST00000245544 SIPA1L3O60292 1781 aaPredicted RBP17■□□□□ 0.31
NUP85-201ENST00000245544 F6X3S4 739 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms