RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 TOP1P11387 765 aaKnown RBP16.2■□□□□ 0.18
TARDBP-201ENST00000240185 ANO10Q9NW15 660 aa16.2■□□□□ 0.18
TARDBP-201ENST00000240185 PAFAH1B1P43034 410 aa16.19■□□□□ 0.18
TARDBP-201ENST00000240185 CTR9Q6PD62 1173 aa16.19■□□□□ 0.18
TARDBP-201ENST00000240185 GGNBP2Q9H3C7 697 aa16.19■□□□□ 0.18
TARDBP-201ENST00000240185 GSTTP1A0A1W2PQM5 241 aa16.19■□□□□ 0.18
TARDBP-201ENST00000240185 TWISTNBQ3B726 338 aaPredicted RBP16.19■□□□□ 0.18
TARDBP-201ENST00000240185 GCOM1H8Y6P7 765 aaPredicted RBP16.19■□□□□ 0.18
TARDBP-201ENST00000240185 MYZAPP0CAP1 466 aa16.19■□□□□ 0.18
TARDBP-201ENST00000240185 FERMT3Q86UX7 667 aa16.19■□□□□ 0.18
TARDBP-201ENST00000240185 CDKL5O76039 1030 aa16.19■□□□□ 0.18
TARDBP-201ENST00000240185 MAP4K4O95819 1239 aaPredicted RBP16.19■□□□□ 0.18
TARDBP-201ENST00000240185 NUP133Q8WUM0 1156 aa16.19■□□□□ 0.18
TARDBP-201ENST00000240185 MCM5P33992 734 aa16.18■□□□□ 0.18
TARDBP-201ENST00000240185 GOPCQ9HD26 462 aa16.18■□□□□ 0.18
TARDBP-201ENST00000240185 POTEB2H3BUK9 544 aa16.18■□□□□ 0.18
TARDBP-201ENST00000240185 NBPF1Q3BBV0 1214 aa16.18■□□□□ 0.18
TARDBP-201ENST00000240185 CETN2P41208 172 aa16.18■□□□□ 0.18
TARDBP-201ENST00000240185 CCDC57Q2TAC2 916 aa16.18■□□□□ 0.18
TARDBP-201ENST00000240185 MTHFSP49914 203 aa16.18■□□□□ 0.18
TARDBP-201ENST00000240185 SPECC1LQ69YQ0 1117 aa16.18■□□□□ 0.18
TARDBP-201ENST00000240185 CCDC158Q5M9N0 1113 aa16.17■□□□□ 0.18
TARDBP-201ENST00000240185 KRT222Q8N1A0 295 aa16.17■□□□□ 0.18
TARDBP-201ENST00000240185 NEMFO60524 1076 aa16.17■□□□□ 0.18
TARDBP-201ENST00000240185 IRX3P78415 501 aaPredicted RBP16.17■□□□□ 0.18
TARDBP-201ENST00000240185 PPM1EQ8WY54 764 aa16.17■□□□□ 0.18
TARDBP-201ENST00000240185 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.17■□□□□ 0.182e-12■□□□□ 8.7
TARDBP-201ENST00000240185 CCDC178Q5BJE1 867 aa16.16■□□□□ 0.18
TARDBP-201ENST00000240185 SOGA3Q5TF21 947 aa16.16■□□□□ 0.18
TARDBP-201ENST00000240185 RAPGEF4Q8WZA2 1011 aa16.16■□□□□ 0.18
TARDBP-201ENST00000240185 GIGYF2Q6Y7W6 1299 aaKnown RBP16.16■□□□□ 0.18
TARDBP-201ENST00000240185 PRIMPOLQ96LW4 560 aa16.16■□□□□ 0.18
TARDBP-201ENST00000240185 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
TARDBP-201ENST00000240185 DNA2P51530 1060 aa16.16■□□□□ 0.18
TARDBP-201ENST00000240185 TTC39AQ5SRH9 613 aa16.16■□□□□ 0.18
TARDBP-201ENST00000240185 CCDC83Q8IWF9 413 aa16.16■□□□□ 0.18
TARDBP-201ENST00000240185 NACAP1Q9BZK3 213 aa16.16■□□□□ 0.18
TARDBP-201ENST00000240185 TMX1Q9H3N1 280 aa16.16■□□□□ 0.18
TARDBP-201ENST00000240185 HLTFQ14527 1009 aaKnown RBP eCLIP16.15■□□□□ 0.18
TARDBP-201ENST00000240185 SRCIN1Q9C0H9 1055 aa16.15■□□□□ 0.18
TARDBP-201ENST00000240185 WASHC2AQ641Q2 1341 aa16.15■□□□□ 0.18
TARDBP-201ENST00000240185 MVPQ14764 893 aaKnown RBP16.15■□□□□ 0.18
TARDBP-201ENST00000240185 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
TARDBP-201ENST00000240185 KLHL10Q6JEL2 608 aa16.14■□□□□ 0.17
TARDBP-201ENST00000240185 SCAND2PQ9GZW5 306 aaPredicted RBP16.14■□□□□ 0.17
TARDBP-201ENST00000240185 DESP17661 470 aa16.14■□□□□ 0.17
TARDBP-201ENST00000240185 CWC27Q6UX04 472 aaKnown RBP16.14■□□□□ 0.17
TARDBP-201ENST00000240185 KRT32Q14532 448 aa16.14■□□□□ 0.17
TARDBP-201ENST00000240185 HSPA4P34932 840 aa16.13■□□□□ 0.17
TARDBP-201ENST00000240185 ATF7IPQ6VMQ6 1270 aa16.13■□□□□ 0.17
TARDBP-201ENST00000240185 FBF1Q8TES7 1133 aa16.13■□□□□ 0.17
TARDBP-201ENST00000240185 USO1O60763 962 aaKnown RBP16.13■□□□□ 0.17
TARDBP-201ENST00000240185 NEBLO76041 1014 aa16.13■□□□□ 0.17
TARDBP-201ENST00000240185 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
TARDBP-201ENST00000240185 ATP2C2O75185 946 aa16.13■□□□□ 0.17
TARDBP-201ENST00000240185 GSDMDP57764 484 aa16.13■□□□□ 0.17
TARDBP-201ENST00000240185 SNW1Q13573 536 aaKnown RBP16.13■□□□□ 0.17
TARDBP-201ENST00000240185 FKBP15Q5T1M5 1219 aa16.13■□□□□ 0.17
TARDBP-201ENST00000240185 CACNA2D4Q7Z3S7 1137 aa16.13■□□□□ 0.17
TARDBP-201ENST00000240185 ATP2B2Q01814 1243 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 ATAD2BQ9ULI0 1458 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 CASTP20810 708 aaKnown RBP16.12■□□□□ 0.17
TARDBP-201ENST00000240185 CCT4P50991 539 aaKnown RBP16.12■□□□□ 0.17
TARDBP-201ENST00000240185 CCDC97Q96F63 343 aaPredicted RBP16.12■□□□□ 0.17
TARDBP-201ENST00000240185 NAA15Q9BXJ9 866 aaKnown RBP16.12■□□□□ 0.17
TARDBP-201ENST00000240185 RSPH14Q9UHP6 348 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 ADCY5O95622 1261 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 PPP2R1AP30153 589 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 C6orf163Q5TEZ5 329 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 MAATS1Q7Z4T9 603 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 CPLX3Q8WVH0 158 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 SIL1Q9H173 461 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 PRKAR2BP31323 418 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 FHOD3Q2V2M9 1422 aa16.12■□□□□ 0.17
TARDBP-201ENST00000240185 IVLP07476 585 aa16.11■□□□□ 0.17
TARDBP-201ENST00000240185 CKAP2LQ8IYA6 745 aa16.11■□□□□ 0.17
TARDBP-201ENST00000240185 ANAPC15P60006 121 aa16.11■□□□□ 0.17
TARDBP-201ENST00000240185 PAXBP1Q9Y5B6 917 aa16.11■□□□□ 0.17
TARDBP-201ENST00000240185 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
TARDBP-201ENST00000240185 SSFA2P28290 1259 aa16.11■□□□□ 0.17
TARDBP-201ENST00000240185 PSME1Q06323 249 aa16.11■□□□□ 0.17
TARDBP-201ENST00000240185 CEP135Q66GS9 1140 aa16.11■□□□□ 0.17
TARDBP-201ENST00000240185 VPS36Q86VN1 386 aa16.11■□□□□ 0.17
TARDBP-201ENST00000240185 HOOK3Q86VS8 718 aa16.11■□□□□ 0.17
TARDBP-201ENST00000240185 WASF1Q92558 559 aa16.1■□□□□ 0.17
TARDBP-201ENST00000240185 TNPO1Q92973 898 aaKnown RBP16.1■□□□□ 0.17
TARDBP-201ENST00000240185 NUP88Q99567 741 aaPredicted RBP16.1■□□□□ 0.17
TARDBP-201ENST00000240185 POTEJP0CG39 1038 aa16.1■□□□□ 0.17
TARDBP-201ENST00000240185 ZSWIM4Q9H7M6 989 aa16.1■□□□□ 0.17
TARDBP-201ENST00000240185 CNNM1Q9NRU3 951 aa16.1■□□□□ 0.17
TARDBP-201ENST00000240185 CTNNA3Q9UI47 895 aa16.1■□□□□ 0.17
TARDBP-201ENST00000240185 PPP1R12BO60237 982 aaPredicted RBP16.09■□□□□ 0.17
TARDBP-201ENST00000240185 YEATS4O95619 227 aa16.09■□□□□ 0.17
TARDBP-201ENST00000240185 CEP112Q8N8E3 955 aa16.09■□□□□ 0.17
TARDBP-201ENST00000240185 ERCC6Q03468 1493 aa16.09■□□□□ 0.17
TARDBP-201ENST00000240185 TMC6Q7Z403 805 aa16.09■□□□□ 0.17
TARDBP-201ENST00000240185 CTNNBL1Q8WYA6 563 aaPredicted RBP16.09■□□□□ 0.17
TARDBP-201ENST00000240185 UBAC1Q9BSL1 405 aa16.09■□□□□ 0.17
TARDBP-201ENST00000240185 GOLGA6L9A6NEM1 432 aa16.09■□□□□ 0.17
TARDBP-201ENST00000240185 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms