RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 FAM177A1Q8N128 213 aaPredicted RBP11.27□□□□□ -0.6
NUDCD1-201ENST00000239690 TRMT1Q9NXH9 659 aaKnown RBP11.27□□□□□ -0.6
NUDCD1-201ENST00000239690 GRIN2BQ13224 1484 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 HIP1O00291 1037 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 CCDC186Q7Z3E2 898 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 CCDC83Q8IWF9 413 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 CKAP2LQ8IYA6 745 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 ZGPATQ8N5A5 531 aaKnown RBP11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 DDX19AQ9NUU7 478 aaKnown RBP11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 CCDC171Q6TFL3 1326 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 SERPINC1P01008 464 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 EIF2S2P20042 333 aaKnown RBP11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 CALRP27797 417 aaKnown RBP11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 ZNF165P49910 485 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 GABPB1Q06547 395 aaPredicted RBP11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 NFE2L2Q16236 605 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 EXOC6BQ9Y2D4 811 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 ME1P48163 572 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 TRIM29Q14134 588 aa11.27□□□□□ -0.61
NUDCD1-201ENST00000239690 IL16Q14005 1332 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 SMTNL1A8MU46 457 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 U2AF2P26368 475 aaKnown RBP eCLIP11.26□□□□□ -0.613e-6■■■■□ 25.8
NUDCD1-201ENST00000239690 UTP14CQ5TAP6 766 aaKnown RBP11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 FAM200AQ8TCP9 573 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 LMBRD1Q9NUN5 540 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 PRAG1Q86YV5 1406 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 CASTP20810 708 aaKnown RBP11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 DMTNQ08495 405 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 STK38Q15208 465 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 BLOC1S2Q6QNY1 142 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 ZNF397Q8NF99 534 aaPredicted RBP11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 FSD1Q9BTV5 496 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 SH2B1Q9NRF2 756 aaPredicted RBP11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 CCDC141Q6ZP82 1450 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 SCAF11Q99590 1463 aaKnown RBP11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 URI1O94763 535 aaPredicted RBP11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 CAVIN2O95810 425 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 ZBTB40Q9NUA8 1239 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 ARHGEF12Q9NZN5 1544 aa11.26□□□□□ -0.61
NUDCD1-201ENST00000239690 SDSP20132 328 aa11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 LMOD2Q6P5Q4 547 aa11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 RASSF8Q8NHQ8 419 aa11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 KDM4AO75164 1064 aa11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 UHRF1BP1Q6BDS2 1440 aa11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 CBFA2T2O43439 604 aa11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 GSDMDP57764 484 aa11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 AXDND1Q5T1B0 1012 aaPredicted RBP11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 CCDC30Q5VVM6 783 aa11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 TXLNBQ8N3L3 684 aa11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 ANO10Q9NW15 660 aa11.25□□□□□ -0.61
NUDCD1-201ENST00000239690 RIOK3O14730 519 aaKnown RBP11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 STK3Q13188 491 aa11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 SKIDA1Q1XH10 827 aa11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 THUMPD2Q9BTF0 503 aaKnown RBP11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 POLR3AO14802 1390 aaPredicted RBP11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 ZSCAN22P10073 491 aaPredicted RBP11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 CWC27Q6UX04 472 aaKnown RBP11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 ARHGAP45Q92619 1136 aa11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 ERBB4Q15303 1308 aa11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 ARHGAP5Q13017 1502 aa11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 MAP4K4O95819 1239 aaPredicted RBP11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 SNW1Q13573 536 aaKnown RBP11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 LRRFIP1Q32MZ4 808 aaKnown RBP11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 CCDC102AQ96A19 550 aa11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 BCL2L12Q9HB09 334 aa11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 IL1RAPL2Q9NP60 686 aa11.24□□□□□ -0.61
NUDCD1-201ENST00000239690 CNPY2Q9Y2B0 182 aa11.23□□□□□ -0.61
NUDCD1-201ENST00000239690 CCDC9Q9Y3X0 531 aaKnown RBP11.23□□□□□ -0.61
NUDCD1-201ENST00000239690 DNMBPQ6XZF7 1577 aa11.23□□□□□ -0.61
NUDCD1-201ENST00000239690 ANAPC15P60006 121 aa11.23□□□□□ -0.61
NUDCD1-201ENST00000239690 IRX3P78415 501 aaPredicted RBP11.23□□□□□ -0.61
NUDCD1-201ENST00000239690 CTAGE5O15320 804 aa11.23□□□□□ -0.61
NUDCD1-201ENST00000239690 SLU7O95391 586 aaKnown RBP11.23□□□□□ -0.61
NUDCD1-201ENST00000239690 TTLL5Q6EMB2 1281 aa11.23□□□□□ -0.61
NUDCD1-201ENST00000239690 TSC1Q92574 1164 aa11.23□□□□□ -0.61
NUDCD1-201ENST00000239690 LTV1Q96GA3 475 aaPredicted RBP11.23□□□□□ -0.61
NUDCD1-201ENST00000239690 COL17A1Q9UMD9 1497 aaPredicted RBP11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 IBTKQ9P2D0 1353 aaPredicted RBP11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 CC2D2AQ9P2K1 1620 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 ZSCAN12O43309 604 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 TEFQ10587 303 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 INTS4Q96HW7 963 aaKnown RBP11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 KIAA0754O94854 1291 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 GBP3Q9H0R5 595 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 TMEM63CQ9P1W3 806 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 NESP48681 1621 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 KIF14Q15058 1648 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 PTGS1P23219 599 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 NEXNQ0ZGT2 675 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 USP26Q9BXU7 913 aa11.22□□□□□ -0.61
NUDCD1-201ENST00000239690 SKILP12757 684 aa11.21□□□□□ -0.61
NUDCD1-201ENST00000239690 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.21□□□□□ -0.61
NUDCD1-201ENST00000239690 V9GYY5 206 aaPredicted RBP11.21□□□□□ -0.61
NUDCD1-201ENST00000239690 C17orf53Q8N3J3 647 aaPredicted RBP11.21□□□□□ -0.61
NUDCD1-201ENST00000239690 CAGE1Q8TC20 777 aa11.21□□□□□ -0.61
NUDCD1-201ENST00000239690 NUP160Q12769 1436 aa11.21□□□□□ -0.61
NUDCD1-201ENST00000239690 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms