RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 DDX11L8A8MPP1 907 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 OFD1O75665 1012 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 MCM4P33991 863 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 RBM25P49756 843 aaKnown RBP7.86□□□□□ -1.15
SGIP1-201ENST00000237247 ZKSCAN2Q63HK3 967 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 TCP11L2Q8N4U5 519 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 ZNF428Q96B54 188 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 POGKQ9P215 609 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 PXDNQ92626 1479 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 KIAA1211Q6ZU35 1233 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 MORC1Q86VD1 984 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 ZNF692Q9BU19 519 aaPredicted RBP7.86□□□□□ -1.15
SGIP1-201ENST00000237247 ERBB4Q15303 1308 aa7.86□□□□□ -1.15
SGIP1-201ENST00000237247 IRX3P78415 501 aaPredicted RBP7.86□□□□□ -1.15
SGIP1-201ENST00000237247 FBXO31Q5XUX0 539 aaPredicted RBP7.86□□□□□ -1.15
SGIP1-201ENST00000237247 RLBP1P12271 317 aa7.85□□□□□ -1.15
SGIP1-201ENST00000237247 DCCP43146 1447 aa7.85□□□□□ -1.15
SGIP1-201ENST00000237247 LAMB4A4D0S4 1761 aa7.85□□□□□ -1.15
SGIP1-201ENST00000237247 IBTKQ9P2D0 1353 aaPredicted RBP7.85□□□□□ -1.15
SGIP1-201ENST00000237247 DDX19BQ9UMR2 479 aa7.85□□□□□ -1.15
SGIP1-201ENST00000237247 AHDC1Q5TGY3 1603 aaPredicted RBP7.84□□□□□ -1.15
SGIP1-201ENST00000237247 MRE11P49959 708 aa7.84□□□□□ -1.15
SGIP1-201ENST00000237247 DZIP1LQ8IYY4 767 aaKnown RBP7.84□□□□□ -1.15
SGIP1-201ENST00000237247 CCDC94Q9BW85 323 aaPredicted RBP7.84□□□□□ -1.15
SGIP1-201ENST00000237247 ALDH1L2Q3SY69 923 aa7.84□□□□□ -1.15
SGIP1-201ENST00000237247 CLEC17AQ6ZS10 378 aa7.84□□□□□ -1.15
SGIP1-201ENST00000237247 PLEKHF1Q96S99 279 aa7.84□□□□□ -1.15
SGIP1-201ENST00000237247 KIF24Q5T7B8 1368 aa7.84□□□□□ -1.15
SGIP1-201ENST00000237247 CLGNO14967 610 aa7.84□□□□□ -1.16
SGIP1-201ENST00000237247 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.84□□□□□ -1.16
SGIP1-201ENST00000237247 NUP188Q5SRE5 1749 aa7.84□□□□□ -1.16
SGIP1-201ENST00000237247 A0A1W2PP64 1363 aa7.83□□□□□ -1.16
SGIP1-201ENST00000237247 EVC2Q86UK5 1308 aa7.83□□□□□ -1.16
SGIP1-201ENST00000237247 C22orf23Q9BZE7 217 aa7.83□□□□□ -1.16
SGIP1-201ENST00000237247 AATKQ6ZMQ8 1374 aa7.83□□□□□ -1.16
SGIP1-201ENST00000237247 C5P01031 1676 aa7.83□□□□□ -1.16
SGIP1-201ENST00000237247 DYNC1I1O14576 645 aa7.83□□□□□ -1.16
SGIP1-201ENST00000237247 PLCD3Q8N3E9 789 aa7.83□□□□□ -1.16
SGIP1-201ENST00000237247 ATAD2Q6PL18 1390 aa7.83□□□□□ -1.16
SGIP1-201ENST00000237247 PLPPR3Q6T4P5 718 aa7.82□□□□□ -1.16
SGIP1-201ENST00000237247 PSEN1P49768 467 aa7.82□□□□□ -1.16
SGIP1-201ENST00000237247 AXDND1Q5T1B0 1012 aaPredicted RBP7.82□□□□□ -1.16
SGIP1-201ENST00000237247 YY1AP1Q9H869 796 aa7.82□□□□□ -1.16
SGIP1-201ENST00000237247 CACNA1FO60840 1977 aa7.82□□□□□ -1.16
SGIP1-201ENST00000237247 NPM1P06748 294 aaKnown RBP eCLIP7.82□□□□□ -1.16
SGIP1-201ENST00000237247 SKOR2Q2VWA4 1001 aaPredicted RBP7.82□□□□□ -1.16
SGIP1-201ENST00000237247 CFAP44Q96MT7 982 aa7.82□□□□□ -1.16
SGIP1-201ENST00000237247 MRC1P22897 1456 aa7.82□□□□□ -1.16
SGIP1-201ENST00000237247 HAP1P54257 671 aaPredicted RBP7.81□□□□□ -1.16
SGIP1-201ENST00000237247 ARID3AQ99856 593 aa7.81□□□□□ -1.16
SGIP1-201ENST00000237247 LTKP29376 864 aa7.81□□□□□ -1.16
SGIP1-201ENST00000237247 NUCB1Q02818 461 aa7.81□□□□□ -1.16
SGIP1-201ENST00000237247 GRIPAP1Q4V328 841 aa7.81□□□□□ -1.16
SGIP1-201ENST00000237247 ATF7IPQ6VMQ6 1270 aa7.81□□□□□ -1.16
SGIP1-201ENST00000237247 MTHFSP49914 203 aa7.81□□□□□ -1.16
SGIP1-201ENST00000237247 ZBTB40Q9NUA8 1239 aa7.81□□□□□ -1.16
SGIP1-201ENST00000237247 EDC4Q6P2E9 1401 aaKnown RBP7.81□□□□□ -1.16
SGIP1-201ENST00000237247 VGLL3A8MV65 326 aa7.8□□□□□ -1.16
SGIP1-201ENST00000237247 BMP2KLQ5H9B9 411 aa7.8□□□□□ -1.16
SGIP1-201ENST00000237247 HSCBQ8IWL3 235 aa7.8□□□□□ -1.16
SGIP1-201ENST00000237247 ARHGAP45Q92619 1136 aa7.8□□□□□ -1.16
SGIP1-201ENST00000237247 PLEKHG2Q9H7P9 1386 aa7.8□□□□□ -1.16
SGIP1-201ENST00000237247 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.8□□□□□ -1.16
SGIP1-201ENST00000237247 KCNG1Q9UIX4 513 aa7.8□□□□□ -1.16
SGIP1-201ENST00000237247 PRR36Q9H6K5 1346 aa7.8□□□□□ -1.16
SGIP1-201ENST00000237247 IPO8O15397 1037 aaKnown RBP7.8□□□□□ -1.16
SGIP1-201ENST00000237247 TRAK2O60296 914 aa7.8□□□□□ -1.16
SGIP1-201ENST00000237247 ZNF622Q969S3 477 aaKnown RBP eCLIP7.8□□□□□ -1.16
SGIP1-201ENST00000237247 SLKQ9H2G2 1235 aaPredicted RBP7.8□□□□□ -1.16
SGIP1-201ENST00000237247 TRIM27P14373 513 aa7.79□□□□□ -1.16
SGIP1-201ENST00000237247 RAB3GAP1Q15042 981 aa7.79□□□□□ -1.16
SGIP1-201ENST00000237247 TRIM35Q9UPQ4 493 aa7.79□□□□□ -1.16
SGIP1-201ENST00000237247 ADGRL3Q9HAR2 1447 aa7.79□□□□□ -1.16
SGIP1-201ENST00000237247 PANK2Q9BZ23 570 aa7.79□□□□□ -1.16
SGIP1-201ENST00000237247 TMPOP42166 694 aaKnown RBP7.79□□□□□ -1.16
SGIP1-201ENST00000237247 CNPY4Q8N129 248 aa7.79□□□□□ -1.16
SGIP1-201ENST00000237247 GCC1Q96CN9 775 aa7.79□□□□□ -1.16
SGIP1-201ENST00000237247 TRIM44Q96DX7 344 aaPredicted RBP7.79□□□□□ -1.16
SGIP1-201ENST00000237247 USP6P35125 1406 aa7.79□□□□□ -1.16
SGIP1-201ENST00000237247 NWD2Q9ULI1 1742 aa7.79□□□□□ -1.16
SGIP1-201ENST00000237247 DNAJC2Q99543 621 aaKnown RBP7.78□□□□□ -1.16
SGIP1-201ENST00000237247 C14orf37Q86TY3 774 aa7.78□□□□□ -1.16
SGIP1-201ENST00000237247 GBP4Q96PP9 640 aa7.78□□□□□ -1.16
SGIP1-201ENST00000237247 SLC12A5Q9H2X9 1139 aa7.78□□□□□ -1.16
SGIP1-201ENST00000237247 TNNQ9UQP3 1299 aa7.78□□□□□ -1.16
SGIP1-201ENST00000237247 A0A1B0GUL6 1792 aa7.78□□□□□ -1.16
SGIP1-201ENST00000237247 GRPEL1Q9HAV7 217 aa7.78□□□□□ -1.16
SGIP1-201ENST00000237247 GEMIN8Q9NWZ8 242 aaKnown RBP7.78□□□□□ -1.16
SGIP1-201ENST00000237247 LRP6O75581 1613 aa7.77□□□□□ -1.16
SGIP1-201ENST00000237247 CDK11BP21127 795 aaKnown RBP7.77□□□□□ -1.17
SGIP1-201ENST00000237247 SMC4Q9NTJ3 1288 aa7.77□□□□□ -1.17
SGIP1-201ENST00000237247 ROBO1Q9Y6N7 1651 aa7.77□□□□□ -1.17
SGIP1-201ENST00000237247 SSH1Q8WYL5 1049 aa7.77□□□□□ -1.17
SGIP1-201ENST00000237247 PPP1R9BQ96SB3 815 aa7.77□□□□□ -1.17
SGIP1-201ENST00000237247 ABCC4O15439 1325 aa7.76□□□□□ -1.17
SGIP1-201ENST00000237247 HS1BP3Q53T59 392 aa7.76□□□□□ -1.17
SGIP1-201ENST00000237247 FAM13BQ9NYF5 915 aa7.76□□□□□ -1.17
SGIP1-201ENST00000237247 COL5A3P25940 1745 aaPredicted RBP7.76□□□□□ -1.17
SGIP1-201ENST00000237247 TJP1Q07157 1748 aa7.76□□□□□ -1.17
SGIP1-201ENST00000237247 EXOSC9Q06265 439 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms